Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS01G64000	Oryza sativa	0.0	798	389	100.00
AT2G36270	Arabidopsis thaliana	2e-60	208	443	38.37
ATR_00114G00100	Amborella trichopoda	2e-56	196	376	40.69
AT3G44460	Arabidopsis thaliana	2e-42	157	384	36.98
AT3G56850	Arabidopsis thaliana	9e-42	154	319	37.30
OS06G10880	Oryza sativa	1e-40	152	392	35.97
OS09G28310	Oryza sativa	6e-39	148	358	35.20
OS02G52780	Oryza sativa	3e-38	146	331	35.95
OS01G59760	Oryza sativa	8e-37	142	320	36.25
AT1G49720	Arabidopsis thaliana	3e-33	133	166	47.59
ATR_00040G00270	Amborella trichopoda	6e-33	130	323	34.98
AT2G41070	Arabidopsis thaliana	1e-32	128	320	34.69
PP00009G01290	Physcomitrella patens	1e-32	129	147	51.02
OS05G41070	Oryza sativa	2e-32	129	312	36.54
ATR_00132G00190	Amborella trichopoda	2e-26	114	148	46.62
AT3G19290	Arabidopsis thaliana	4e-26	112	150	45.33
OS07G48660	Oryza sativa	1e-23	102	311	32.15
PP00049G00710	Physcomitrella patens	1e-22	102	149	42.28
ATR_00101G00100	Amborella trichopoda	7e-22	98.6	146	43.84
AT5G42910	Arabidopsis thaliana	3e-21	97.4	371	30.46
AT4G34000	Arabidopsis thaliana	4e-21	98.2	171	38.60
OS08G36790	Oryza sativa	5e-18	87.8	102	50.00
AT1G45249	Arabidopsis thaliana	2e-17	87.4	151	43.05
ATR_00010G02590	Amborella trichopoda	1e-14	76.6	191	34.55
ATR_00061G01870	Amborella trichopoda	6e-14	73.2	111	41.44
ATR_00152G00260	Amborella trichopoda	3e-13	72.8	57	63.16
OS03G20650	Oryza sativa	1e-12	70.5	46	73.91
AT2G17770	Arabidopsis thaliana	2e-12	69.3	66	57.58
AT4G35900	Arabidopsis thaliana	6e-12	69.7	45	73.33
OS01G64730	Oryza sativa	3e-10	64.3	139	33.81
ATR_00061G00920	Amborella trichopoda	3e-10	62.4	78	51.28
OS05G36160	Oryza sativa	2e-09	61.6	95	42.11
AT5G44080	Arabidopsis thaliana	3e-09	62.0	124	43.55
OS08G43600	Oryza sativa	6e-09	58.5	54	57.41
OS09G36910	Oryza sativa	7e-09	58.9	43	69.77
AC00G36350	Asterochloris sp. Cgr-DA1pho v2.0	9e-09	60.8	123	34.15
AT1G03970	Arabidopsis thaliana	2e-08	58.9	62	53.23
CV00G72360	Coccomyxa subellipsoidea C-169	2e-08	59.3	53	52.83
PP00158G00490	Physcomitrella patens	1e-06	53.5	42	57.14
OS12G40920	Oryza sativa	1e-06	53.9	65	44.62
OS03G13614	Oryza sativa	2e-06	53.5	77	44.16
OS02G58670	Oryza sativa	3e-06	50.4	42	61.90
OS06G50480	Oryza sativa	4e-06	50.4	44	56.82
OS06G50600	Oryza sativa	4e-06	50.4	44	56.82
OS06G50830	Oryza sativa	4e-06	50.4	44	56.82
OS02G07840	Oryza sativa	4e-06	52.0	41	56.10
OS02G16680	Oryza sativa	5e-06	51.6	41	56.10
AT5G15830	Arabidopsis thaliana	7e-06	50.1	53	49.06
AT3G30530	Arabidopsis thaliana	7e-06	49.7	42	57.14
AP00G08380	Auxenochlorella protothecoides	8e-06	51.2	43	58.14
OS12G13170	Oryza sativa	9e-06	51.2	87	41.38

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment