Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00137G00310	Amborella trichopoda	5e-77	229	114	100.00
ATR_00060G00200	Amborella trichopoda	1e-54	174	113	72.57
ATR_00060G00260	Amborella trichopoda	2e-54	183	111	76.58
AT1G33080	Arabidopsis thaliana	1e-39	142	108	62.96
AT1G33110	Arabidopsis thaliana	5e-39	141	108	62.04
OS11G03240	Oryza sativa	9e-37	135	108	53.70
OS12G03200	Oryza sativa	3e-36	130	108	53.70
ATR_00008G00960	Amborella trichopoda	3e-36	132	113	53.98
AT1G33100	Arabidopsis thaliana	1e-35	131	108	57.41
AT1G33090	Arabidopsis thaliana	6e-35	129	108	53.70
OS11G03484	Oryza sativa	1e-34	127	100	57.00
AT5G44050	Arabidopsis thaliana	5e-32	121	111	50.45
OS11G03500	Oryza sativa	3e-31	119	108	51.85
AT5G10420	Arabidopsis thaliana	3e-31	119	111	52.25
OS12G03260	Oryza sativa	4e-31	119	108	51.85
AT5G65380	Arabidopsis thaliana	5e-31	118	111	50.45
OS08G44870	Oryza sativa	2e-28	111	110	46.36
AT4G25640	Arabidopsis thaliana	3e-28	111	108	51.85
ATR_00009G01350	Amborella trichopoda	4e-27	107	108	46.30
AT4G00350	Arabidopsis thaliana	7e-27	107	108	45.37
AT3G03620	Arabidopsis thaliana	2e-26	106	108	45.37
OS02G57570	Oryza sativa	2e-26	105	112	46.43
OS08G43654	Oryza sativa	4e-26	105	110	47.27
AT1G47530	Arabidopsis thaliana	5e-26	105	107	44.86
OS09G29284	Oryza sativa	1e-25	103	110	46.36
ATR_00059G01620	Amborella trichopoda	4e-25	102	108	45.37
ATR_00009G01370	Amborella trichopoda	4e-25	99.4	110	45.45
AT5G17700	Arabidopsis thaliana	8e-25	102	109	44.95
ATR_00059G01570	Amborella trichopoda	8e-25	101	108	48.15
ATR_00049G01910	Amborella trichopoda	2e-24	97.1	107	47.66
OS03G08900	Oryza sativa	4e-24	100	110	43.64
ATR_00049G01890	Amborella trichopoda	6e-24	99.8	108	47.22
AT1G23300	Arabidopsis thaliana	1e-23	99.0	106	48.11
ATR_00049G01970	Amborella trichopoda	2e-23	96.3	107	46.73
ATR_00049G01920	Amborella trichopoda	3e-23	94.4	107	44.86
AT3G26590	Arabidopsis thaliana	3e-23	97.8	110	43.64
OS08G37432	Oryza sativa	4e-23	97.4	108	42.59
ATR_00059G01610	Amborella trichopoda	2e-22	95.1	108	42.59
ATR_00059G01630	Amborella trichopoda	3e-22	94.7	111	43.24
AT5G38030	Arabidopsis thaliana	5e-22	94.4	108	43.52
AT1G12950	Arabidopsis thaliana	8e-22	94.0	107	43.93
ATR_00049G01940	Amborella trichopoda	1e-21	92.0	92	47.83
OS03G42830	Oryza sativa	4e-20	88.6	110	42.73
ATR_00059G01980	Amborella trichopoda	7e-19	83.6	91	47.25
ATR_00062G01640	Amborella trichopoda	3e-18	83.6	91	46.15
OS03G37490	Oryza sativa	4e-18	83.6	108	39.81
ATR_00006G00460	Amborella trichopoda	4e-18	83.6	111	41.44
ATR_00021G02020	Amborella trichopoda	8e-18	82.4	110	40.00
OS03G37411	Oryza sativa	3e-17	80.9	91	43.96
OS01G31980	Oryza sativa	3e-17	80.9	111	40.54
OS06G29950	Oryza sativa	3e-17	80.9	112	41.96
ATR_00016G01560	Amborella trichopoda	4e-17	80.5	94	47.87
AT1G11670	Arabidopsis thaliana	6e-17	80.1	91	40.66
PP00013G01330	Physcomitrella patens	6e-17	80.1	110	40.00
PP00028G00010	Physcomitrella patens	8e-17	79.7	111	39.64
AT4G21903	Arabidopsis thaliana	9e-17	79.7	110	40.00
AT1G61890	Arabidopsis thaliana	1e-16	79.3	91	39.56
PP00068G00630	Physcomitrella patens	2e-16	78.6	111	40.54
OS03G37640	Oryza sativa	2e-16	78.2	108	39.81
OS10G11860	Oryza sativa	5e-16	77.0	93	41.94
ATR_00006G00480	Amborella trichopoda	9e-16	76.3	111	35.14
AT4G21910	Arabidopsis thaliana	1e-15	76.6	91	45.05
OS06G29844	Oryza sativa	1e-15	76.3	112	39.29
OS06G49310	Oryza sativa	2e-15	75.5	111	39.64
PP00183G00300	Physcomitrella patens	4e-15	75.1	111	38.74
OS10G11354	Oryza sativa	8e-15	73.9	112	39.29
ATR_00092G00450	Amborella trichopoda	9e-15	73.6	108	37.04
OS07G33310	Oryza sativa	2e-14	73.2	91	41.76
OS07G01750	Oryza sativa	2e-14	73.2	110	35.45
OS01G56050	Oryza sativa	4e-14	72.0	105	46.67
AT3G21690	Arabidopsis thaliana	4e-14	72.0	91	41.76
ATR_00006G00440	Amborella trichopoda	7e-14	71.2	111	37.84
PP00048G00160	Physcomitrella patens	8e-14	71.2	91	46.15
PP00181G00120	Physcomitrella patens	1e-13	70.9	119	39.50
AT1G66760	Arabidopsis thaliana	1e-13	70.5	111	36.04
ATR_00006G00500	Amborella trichopoda	4e-13	69.3	111	32.43
OS05G48040	Oryza sativa	4e-13	68.9	110	34.55
ATR_00032G02500	Amborella trichopoda	6e-13	68.6	110	35.45
OS01G49120	Oryza sativa	7e-13	68.6	111	36.04
ATR_00006G00530	Amborella trichopoda	1e-12	68.2	111	31.53
OS06G29994	Oryza sativa	1e-12	67.8	107	36.45
OS10G20470	Oryza sativa	2e-12	67.0	92	38.04
PP00145G00670	Physcomitrella patens	3e-12	67.0	112	37.50
PP00147G00020	Physcomitrella patens	3e-12	65.9	113	39.82
AT5G52450	Arabidopsis thaliana	6e-12	65.9	110	37.27
AT3G59030	Arabidopsis thaliana	8e-12	65.5	91	36.26
AT2G34360	Arabidopsis thaliana	2e-11	63.9	110	34.55
AT2G04080	Arabidopsis thaliana	3e-11	63.9	108	30.56
OS10G20450	Oryza sativa	5e-11	63.2	112	35.71
AT1G73700	Arabidopsis thaliana	5e-11	62.8	110	37.27
OS04G30490	Oryza sativa	5e-11	62.8	112	31.25
phs153700	Phytophtora sojae	8e-11	63.2	113	32.74
AT2G04050	Arabidopsis thaliana	2e-10	61.6	90	33.33
PP00113G00440	Physcomitrella patens	2e-10	61.6	110	27.27
OS02G45380	Oryza sativa	3e-10	60.8	108	29.63
PP00070G00160	Physcomitrella patens	4e-10	60.5	112	33.93
AT1G71140	Arabidopsis thaliana	5e-10	60.1	111	33.33
AT1G71870	Arabidopsis thaliana	6e-10	60.1	110	30.00
AT2G04040	Arabidopsis thaliana	7e-10	59.7	108	30.56
AT3G23560	Arabidopsis thaliana	2e-09	58.2	109	31.19
AT3G23550	Arabidopsis thaliana	2e-09	58.2	109	30.28
OS07G31884	Oryza sativa	3e-09	57.8	91	35.16
AT2G04070	Arabidopsis thaliana	4e-09	57.4	107	28.97
phs284850	Phytophtora sojae	9e-09	55.8	72	34.72
MP12G01880	Micromonas pusilla strain CCMP1545	1e-08	56.2	108	33.33
OS12G42130	Oryza sativa	1e-08	55.8	108	25.93
phs178070	Phytophtora sojae	2e-08	55.8	112	33.04
AT2G04100	Arabidopsis thaliana	3e-08	54.7	111	26.13
OS10G20350	Oryza sativa	4e-08	54.3	111	35.14
ATR_00069G00890	Amborella trichopoda	5e-08	54.3	108	25.93
OS04G48290	Oryza sativa	7e-08	53.9	108	27.78
AT2G04090	Arabidopsis thaliana	7e-08	53.9	107	27.10
phs91810	Phytophtora sojae	7e-08	52.4	106	33.96
AP00G18790	Auxenochlorella protothecoides	1e-07	53.1	102	31.37
AT1G58340	Arabidopsis thaliana	1e-07	53.1	110	28.18
ATR_00077G00270	Amborella trichopoda	1e-07	52.8	105	27.62
CV00G40610	Coccomyxa subellipsoidea C-169	1e-07	52.8	112	30.36
AT2G38510	Arabidopsis thaliana	2e-07	52.8	107	26.17
ATR_00049G01880	Amborella trichopoda	2e-07	48.9	40	50.00
OS10G20390	Oryza sativa	3e-07	51.6	90	38.89
ORCC809_08G03460	Ostreococcus sp RCC809	4e-07	51.2	108	27.78
phs91850	Phytophtora sojae	6e-07	51.2	113	30.97
phs76310	Phytophtora sojae	6e-07	51.2	114	29.82
gsu135060	Galdieria sulphuraria	7e-07	50.8	92	32.61
phs178050	Phytophtora sojae	1e-06	50.4	112	27.68
ATR_00070G01140	Amborella trichopoda	1e-06	50.1	110	22.73
phs178010	Phytophtora sojae	1e-06	50.1	114	34.21
CNC64A_020G01570	Chlorella sp NC64A	1e-06	49.7	105	27.62
OS06G36330	Oryza sativa	2e-06	49.3	90	31.11
PP00120G00750	Physcomitrella patens	4e-06	48.5	110	21.82
VC00G17880	Volvox carteri	5e-06	48.1	68	42.65
PP00034G02470	Physcomitrella patens	6e-06	48.1	110	20.91
PP00218G00520	Physcomitrella patens	6e-06	48.1	110	20.91
phs178110	Phytophtora sojae	6e-06	47.8	117	30.77
CR01G06100	Chlamydomonas reinhardtii	7e-06	47.8	82	37.80

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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