Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00049G01880	Amborella trichopoda	4e-44	142	72	100.00
ATR_00049G01920	Amborella trichopoda	2e-15	71.2	39	84.62
ATR_00049G01970	Amborella trichopoda	4e-15	71.2	39	84.62
ATR_00049G01910	Amborella trichopoda	2e-14	68.9	39	82.05
ATR_00049G01890	Amborella trichopoda	5e-14	70.1	39	82.05
ATR_00049G01940	Amborella trichopoda	4e-13	67.0	41	73.17
AT1G47530	Arabidopsis thaliana	5e-13	67.0	41	75.61
AT3G26590	Arabidopsis thaliana	5e-11	61.6	39	69.23
AT1G23300	Arabidopsis thaliana	9e-11	60.8	39	71.79
AT5G38030	Arabidopsis thaliana	1e-10	60.5	38	68.42
AT1G12950	Arabidopsis thaliana	1e-10	60.5	39	66.67
ATR_00009G01370	Amborella trichopoda	2e-10	57.4	41	58.54
ATR_00009G01350	Amborella trichopoda	2e-10	59.3	40	62.50
AT4G25640	Arabidopsis thaliana	4e-10	58.9	41	58.54
OS02G57570	Oryza sativa	5e-10	58.2	39	66.67
AT4G00350	Arabidopsis thaliana	7e-10	58.2	37	64.86
ATR_00059G01610	Amborella trichopoda	1e-09	57.4	39	64.10
ATR_00059G01570	Amborella trichopoda	2e-09	57.0	39	64.10
ATR_00021G02020	Amborella trichopoda	2e-09	56.6	39	66.67
OS08G44870	Oryza sativa	3e-09	56.6	40	60.00
ATR_00059G01620	Amborella trichopoda	4e-09	55.8	39	64.10
ATR_00060G00200	Amborella trichopoda	4e-09	53.5	40	60.00
OS09G29284	Oryza sativa	7e-09	55.5	42	59.52
ATR_00008G00960	Amborella trichopoda	2e-08	53.9	41	56.10
ATR_00062G01640	Amborella trichopoda	4e-08	53.1	37	59.46
PP00013G01330	Physcomitrella patens	4e-08	53.1	74	40.54
OS03G42830	Oryza sativa	5e-08	52.8	39	58.97
OS01G56050	Oryza sativa	6e-08	52.8	35	65.71
AT1G11670	Arabidopsis thaliana	6e-08	52.4	37	59.46
AT5G44050	Arabidopsis thaliana	7e-08	52.4	41	48.78
ATR_00059G01630	Amborella trichopoda	7e-08	52.4	39	56.41
OS08G43654	Oryza sativa	1e-07	52.0	40	57.50
AT1G61890	Arabidopsis thaliana	1e-07	51.6	37	62.16
OS10G11860	Oryza sativa	1e-07	51.6	37	59.46
PP00068G00630	Physcomitrella patens	1e-07	51.6	32	71.88
ATR_00137G00310	Amborella trichopoda	1e-07	48.9	40	50.00
OS03G37490	Oryza sativa	2e-07	51.2	35	62.86
OS11G03484	Oryza sativa	2e-07	50.8	41	51.22
OS12G03200	Oryza sativa	2e-07	50.8	40	52.50
AT4G21903	Arabidopsis thaliana	2e-07	51.2	32	68.75
AT1G33080	Arabidopsis thaliana	2e-07	50.8	32	65.62
AT4G21910	Arabidopsis thaliana	3e-07	50.8	32	68.75
OS07G33310	Oryza sativa	3e-07	50.8	32	68.75
OS03G37411	Oryza sativa	3e-07	50.4	35	62.86
AT5G65380	Arabidopsis thaliana	3e-07	50.4	42	50.00
AT1G33110	Arabidopsis thaliana	4e-07	50.1	32	65.62
OS11G03240	Oryza sativa	8e-07	49.3	41	48.78
OS08G37432	Oryza sativa	1e-06	48.9	37	54.05
OS03G08900	Oryza sativa	1e-06	48.9	30	66.67
OS03G37640	Oryza sativa	1e-06	48.9	35	60.00
ATR_00060G00260	Amborella trichopoda	2e-06	48.5	41	51.22
ATR_00016G01560	Amborella trichopoda	2e-06	48.5	32	68.75
AT5G17700	Arabidopsis thaliana	2e-06	48.1	41	56.10
PP00070G00160	Physcomitrella patens	4e-06	47.4	39	56.41
OS11G03500	Oryza sativa	4e-06	47.4	30	63.33
OS12G03260	Oryza sativa	4e-06	47.4	30	63.33
PP00048G00160	Physcomitrella patens	8e-06	46.6	39	53.85
phs91850	Phytophtora sojae	9e-06	46.6	49	51.02
PP00028G00010	Physcomitrella patens	1e-05	46.2	39	53.85

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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