Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00047G01560	Amborella trichopoda	0.0	842	405	100.00
OS05G32110	Oryza sativa	0.0	669	405	77.28
AT5G60920	Arabidopsis thaliana	0.0	655	380	78.95
OS07G41310	Oryza sativa	0.0	651	405	73.33
AT3G02210	Arabidopsis thaliana	0.0	647	406	75.12
AT3G29810	Arabidopsis thaliana	0.0	637	402	72.39
OS03G30260	Oryza sativa	0.0	614	401	70.82
AT5G15630	Arabidopsis thaliana	0.0	594	402	69.40
ATR_00047G01550	Amborella trichopoda	0.0	586	376	71.28
OS03G30250	Oryza sativa	0.0	563	409	64.06
ATR_00047G01570	Amborella trichopoda	0.0	538	371	68.19
OS07G41320	Oryza sativa	0.0	534	416	61.54
PP00246G00290	Physcomitrella patens	1e-178	513	417	57.79
OS10G35460	Oryza sativa	8e-174	499	379	63.85
PP00044G00600	Physcomitrella patens	9e-174	501	398	58.79
ATR_00008G00280	Amborella trichopoda	4e-161	466	370	58.11
PP00084G00590	Physcomitrella patens	3e-159	464	397	56.17
AT1G09790	Arabidopsis thaliana	8e-145	427	377	54.11
ATR_00041G02630	Amborella trichopoda	6e-130	389	385	49.87
OS03G54750	Oryza sativa	1e-126	374	215	80.93
OS04G45700	Oryza sativa	8e-103	316	399	42.11
AT5G60950	Arabidopsis thaliana	8e-63	207	172	56.98
ATR_00232G00030	Amborella trichopoda	7e-49	171	148	54.05
OS03G18910	Oryza sativa	4e-37	147	408	29.41
PP00277G00440	Physcomitrella patens	4e-36	143	398	28.14
PP00263G00520	Physcomitrella patens	1e-35	142	433	29.10
PP00036G01190	Physcomitrella patens	2e-35	142	437	28.15
ATR_00066G02280	Amborella trichopoda	7e-35	140	443	27.77
AT5G49270	Arabidopsis thaliana	1e-34	139	439	27.33
PP00233G00430	Physcomitrella patens	1e-34	140	426	29.58
AT4G16120	Arabidopsis thaliana	2e-34	139	405	29.63
OS07G49080	Oryza sativa	7e-34	137	410	30.24
PP00054G01730	Physcomitrella patens	7e-33	134	419	27.45
PP00195G00280	Physcomitrella patens	2e-32	133	435	26.67
AT4G27110	Arabidopsis thaliana	2e-30	127	441	27.44
AT3G16860	Arabidopsis thaliana	1e-29	124	443	28.22
PP00281G00440	Physcomitrella patens	1e-28	122	435	27.36
ATR_00232G00020	Amborella trichopoda	2e-28	115	107	47.66
PP00021G00090	Physcomitrella patens	5e-28	120	440	28.41
AT3G20580	Arabidopsis thaliana	8e-28	119	445	27.42
ATR_00057G00890	Amborella trichopoda	9e-28	119	401	27.68
OS06G47110	Oryza sativa	1e-24	110	408	26.47

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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