Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00008G00280	Amborella trichopoda	0.0	815	394	100.00
OS05G32110	Oryza sativa	3e-163	473	396	56.82
ATR_00047G01560	Amborella trichopoda	1e-162	470	393	55.98
AT5G60920	Arabidopsis thaliana	6e-159	462	373	57.91
AT3G29810	Arabidopsis thaliana	1e-158	461	393	56.23
OS07G41310	Oryza sativa	5e-157	457	393	54.20
AT3G02210	Arabidopsis thaliana	1e-155	454	391	57.03
AT5G15630	Arabidopsis thaliana	4e-153	447	388	53.09
ATR_00047G01550	Amborella trichopoda	8e-151	441	368	54.35
OS03G30260	Oryza sativa	4e-146	430	395	52.91
OS03G30250	Oryza sativa	2e-144	426	402	50.00
ATR_00047G01570	Amborella trichopoda	2e-143	419	372	53.49
PP00246G00290	Physcomitrella patens	7e-137	406	397	49.62
OS07G41320	Oryza sativa	6e-136	404	402	50.00
PP00044G00600	Physcomitrella patens	1e-132	395	385	50.13
AT1G09790	Arabidopsis thaliana	6e-130	388	368	52.17
OS10G35460	Oryza sativa	2e-124	373	369	49.59
ATR_00041G02630	Amborella trichopoda	3e-123	371	379	47.76
PP00084G00590	Physcomitrella patens	2e-121	367	389	47.56
OS03G54750	Oryza sativa	5e-80	254	205	58.54
OS04G45700	Oryza sativa	1e-67	225	171	57.89
ATR_00232G00030	Amborella trichopoda	4e-49	171	159	49.69
AT5G60950	Arabidopsis thaliana	2e-39	145	162	44.44
PP00195G00280	Physcomitrella patens	1e-38	150	436	30.28
OS03G18910	Oryza sativa	6e-36	143	384	26.30
ATR_00057G00890	Amborella trichopoda	6e-36	143	384	31.25
AT4G16120	Arabidopsis thaliana	1e-34	139	385	26.75
PP00277G00440	Physcomitrella patens	1e-34	138	411	28.95
AT5G49270	Arabidopsis thaliana	2e-34	139	421	27.32
PP00054G01730	Physcomitrella patens	2e-33	135	436	28.67
PP00233G00430	Physcomitrella patens	5e-33	135	439	27.11
PP00036G01190	Physcomitrella patens	8e-33	134	433	28.18
OS07G49080	Oryza sativa	3e-32	132	387	27.39
PP00281G00440	Physcomitrella patens	2e-31	130	417	27.58
OS06G47110	Oryza sativa	2e-30	127	404	25.50
ATR_00066G02280	Amborella trichopoda	2e-30	127	384	27.08
AT4G27110	Arabidopsis thaliana	4e-30	126	387	28.42
AT3G16860	Arabidopsis thaliana	1e-29	125	422	26.30
AT3G20580	Arabidopsis thaliana	1e-29	124	386	28.50
PP00021G00090	Physcomitrella patens	3e-28	120	383	27.42
ATR_00232G00020	Amborella trichopoda	4e-27	110	94	51.06
PP00263G00520	Physcomitrella patens	6e-27	117	429	25.64

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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