Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G06950	Arabidopsis thaliana	0.0	671	331	100.00
AT3G12250	Arabidopsis thaliana	0.0	582	356	87.36
AT5G06960	Arabidopsis thaliana	0.0	516	331	83.69
OS01G59350	Oryza sativa	2e-177	508	333	77.78
OS03G20310	Oryza sativa	2e-174	494	334	75.15
ATR_00095G00330	Amborella trichopoda	3e-173	496	337	76.56
OS07G48820	Oryza sativa	5e-173	491	335	74.63
ATR_00010G00140	Amborella trichopoda	4e-172	493	334	77.54
OS01G17260	Oryza sativa	3e-171	486	332	78.31
OS06G15480	Oryza sativa	1e-142	416	306	69.28
PP00258G00030	Physcomitrella patens	1e-142	414	341	64.81
AT1G68640	Arabidopsis thaliana	6e-140	411	312	66.35
PP00126G01000	Physcomitrella patens	7e-139	404	344	62.79
ATR_00031G00020	Amborella trichopoda	3e-134	397	329	59.88
PP00030G01620	Physcomitrella patens	1e-133	391	345	62.03
OS05G41280	Oryza sativa	9e-132	385	333	62.46
ATR_00022G02590	Amborella trichopoda	1e-131	391	338	58.88
AT1G08320	Arabidopsis thaliana	6e-123	369	292	60.96
OS11G05480	Oryza sativa	2e-121	365	301	58.80
ATR_00010G02650	Amborella trichopoda	2e-119	356	336	56.85
AT5G06839	Arabidopsis thaliana	2e-118	357	345	53.62
PP00257G00610	Physcomitrella patens	8e-117	348	296	62.84
OS12G05680	Oryza sativa	3e-115	349	302	59.60
OS01G64020	Oryza sativa	9e-115	350	296	58.45
AT5G10030	Arabidopsis thaliana	2e-111	335	334	54.19
OS05G37170	Oryza sativa	2e-110	338	296	57.43
AT5G65210	Arabidopsis thaliana	1e-108	328	329	53.50
AT1G22070	Arabidopsis thaliana	1e-108	329	302	55.63
OS09G31390	Oryza sativa	3e-107	330	310	54.19
OS09G10840	Oryza sativa	5e-106	325	310	51.61
AT1G77920	Arabidopsis thaliana	1e-105	320	335	50.15
OS04G54474	Oryza sativa	1e-103	317	301	55.15
OS08G07970	Oryza sativa	9e-100	307	321	49.84
OS06G41100	Oryza sativa	3e-73	239	303	44.22
OS02G10140	Oryza sativa	8e-48	169	184	49.46
OS10G41640	Oryza sativa	1e-36	134	113	59.29
OS01G65970	Oryza sativa	3e-22	95.9	92	52.17
ATR_00130G00570	Amborella trichopoda	3e-22	98.2	220	30.45
PP00074G00040	Physcomitrella patens	1e-16	84.3	252	27.38
PP00357G00110	Physcomitrella patens	3e-16	82.8	234	29.06
AT3G14880	Arabidopsis thaliana	4e-15	77.4	221	25.79
CV00G51650	Coccomyxa subellipsoidea C-169	5e-15	79.7	333	28.23
PP00005G00960	Physcomitrella patens	2e-14	77.4	215	27.44
AT1G58330	Arabidopsis thaliana	3e-13	71.6	179	27.37
OS01G06560	Oryza sativa	5e-13	71.6	208	28.85
AT4G18650	Arabidopsis thaliana	1e-09	61.6	187	25.67
AT4G18680	Arabidopsis thaliana	1e-07	55.5	213	21.60
AT4G18690	Arabidopsis thaliana	1e-07	55.8	229	21.40
OS02G10150	Oryza sativa	2e-07	53.5	88	31.82
PP00039G01700	Physcomitrella patens	2e-06	51.2	146	23.97
OS05G48650	Oryza sativa	2e-06	52.0	213	25.82
OS01G20030	Oryza sativa	9e-06	50.4	194	23.20

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment