Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G18830	Arabidopsis thaliana	0.0	719	350	100.00
ATR_00007G01920	Amborella trichopoda	8e-20	92.4	66	60.61
AT1G06920	Arabidopsis thaliana	7e-19	89.4	101	45.54
OS01G54570	Oryza sativa	4e-18	87.4	68	57.35
AT2G30400	Arabidopsis thaliana	5e-18	87.0	61	63.93
OS05G39950	Oryza sativa	2e-17	87.0	60	63.33
OS01G60810	Oryza sativa	5e-17	85.1	61	60.66
AT5G58360	Arabidopsis thaliana	2e-16	82.0	61	55.74
AT5G01840	Arabidopsis thaliana	4e-16	80.9	63	57.14
OS05G44090	Oryza sativa	2e-15	79.7	80	48.75
AT5G19650	Arabidopsis thaliana	9e-15	76.3	62	53.23
OS05G25910	Oryza sativa	2e-14	75.5	59	54.24
OS07G48150	Oryza sativa	1e-11	68.9	61	49.18
ATR_00059G00930	Amborella trichopoda	1e-11	69.3	66	45.45
PP00034G01810	Physcomitrella patens	1e-11	69.7	61	50.82
PP00028G00250	Physcomitrella patens	2e-11	69.3	61	50.82
PP00065G00200	Physcomitrella patens	2e-11	68.9	61	50.82
OS02G45620	Oryza sativa	4e-11	66.6	62	48.39
ATR_00151G00170	Amborella trichopoda	6e-11	64.7	59	52.54
ATR_00109G00110	Amborella trichopoda	6e-11	66.2	61	52.46
OS01G43610	Oryza sativa	8e-11	66.6	107	36.45
PP00007G01480	Physcomitrella patens	1e-10	67.0	61	49.18
PP00003G00820	Physcomitrella patens	1e-10	66.6	71	45.07
AT3G52525	Arabidopsis thaliana	1e-10	63.2	67	44.78
ATR_00109G00070	Amborella trichopoda	2e-10	64.7	61	50.82
PP00369G00120	Physcomitrella patens	3e-10	65.5	57	49.12
OS03G21870	Oryza sativa	4e-10	63.9	61	47.54
OS04G48830	Oryza sativa	1e-09	62.8	66	46.97
ATR_00030G01930	Amborella trichopoda	2e-09	60.5	61	47.54
AT2G18500	Arabidopsis thaliana	6e-09	60.5	73	39.73
PP00077G00990	Physcomitrella patens	1e-08	60.5	62	48.39
OS10G38880	Oryza sativa	2e-08	58.5	61	47.54
PP00154G00140	Physcomitrella patens	2e-08	60.1	62	46.77
AT2G36026	Arabidopsis thaliana	4e-08	56.2	53	47.17
OS11G05780	Oryza sativa	8e-08	56.6	58	43.10
OS01G12690	Oryza sativa	2e-07	56.2	59	44.07
OS03G10150	Oryza sativa	2e-07	55.8	67	43.28
OS05G12808	Oryza sativa	2e-07	55.8	59	47.46
OS03G03480	Oryza sativa	3e-07	54.7	57	47.37
ATR_00030G01950	Amborella trichopoda	4e-07	54.3	82	40.24
OS11G05770	Oryza sativa	4e-07	55.1	58	46.55
OS12G06150	Oryza sativa	2e-06	53.1	58	44.83
ATR_00027G01370	Amborella trichopoda	2e-06	51.2	58	39.66
OS01G64430	Oryza sativa	6e-06	50.8	58	39.66

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment