Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G02210	Arabidopsis thaliana	0.0	937	453	100.00
AT3G29810	Arabidopsis thaliana	0.0	696	440	73.64
AT5G60920	Arabidopsis thaliana	0.0	694	444	71.85
OS07G41310	Oryza sativa	0.0	677	422	72.51
ATR_00047G01560	Amborella trichopoda	0.0	647	406	75.12
OS05G32110	Oryza sativa	0.0	649	404	73.51
OS03G30260	Oryza sativa	0.0	635	438	67.35
AT5G15630	Arabidopsis thaliana	0.0	606	418	66.75
OS03G30250	Oryza sativa	0.0	571	456	59.43
ATR_00047G01550	Amborella trichopoda	0.0	564	373	68.90
OS07G41320	Oryza sativa	0.0	555	451	57.21
PP00246G00290	Physcomitrella patens	0.0	545	450	57.78
ATR_00047G01570	Amborella trichopoda	0.0	517	368	66.03
PP00044G00600	Physcomitrella patens	3e-179	516	431	54.76
OS10G35460	Oryza sativa	1e-176	509	404	59.65
PP00084G00590	Physcomitrella patens	2e-164	479	429	55.48
ATR_00008G00280	Amborella trichopoda	3e-153	448	369	58.27
AT1G09790	Arabidopsis thaliana	3e-150	442	408	52.21
ATR_00041G02630	Amborella trichopoda	9e-144	426	401	50.37
OS03G54750	Oryza sativa	8e-128	379	239	73.64
AT5G60950	Arabidopsis thaliana	7e-70	227	203	55.17
OS04G45700	Oryza sativa	1e-67	227	200	52.50
ATR_00232G00030	Amborella trichopoda	8e-52	180	144	54.17
ATR_00232G00020	Amborella trichopoda	1e-37	140	128	47.66
PP00277G00440	Physcomitrella patens	9e-37	145	432	28.24
ATR_00066G02280	Amborella trichopoda	1e-36	146	455	26.15
PP00036G01190	Physcomitrella patens	1e-36	146	459	28.32
OS03G18910	Oryza sativa	4e-36	145	426	27.00
PP00195G00280	Physcomitrella patens	4e-36	145	449	26.50
OS07G49080	Oryza sativa	1e-34	140	421	28.03
PP00054G01730	Physcomitrella patens	1e-34	140	472	27.33
PP00263G00520	Physcomitrella patens	1e-34	140	463	27.43
PP00233G00430	Physcomitrella patens	3e-34	140	482	27.39
AT5G49270	Arabidopsis thaliana	8e-34	138	421	25.18
ATR_00057G00890	Amborella trichopoda	1e-32	134	417	28.30
AT4G16120	Arabidopsis thaliana	2e-32	134	426	25.82
PP00021G00090	Physcomitrella patens	3e-32	133	463	27.21
PP00281G00440	Physcomitrella patens	5e-30	127	415	26.27
OS06G47110	Oryza sativa	2e-28	122	435	25.98
AT3G16860	Arabidopsis thaliana	2e-28	122	458	24.45
AT3G20580	Arabidopsis thaliana	5e-27	118	423	26.48
AT4G27110	Arabidopsis thaliana	4e-26	115	454	24.45

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment