Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT2G33330	Arabidopsis thaliana	0.0	612	305	100.00
AT1G04520	Arabidopsis thaliana	3e-159	454	303	78.22
AT5G43980	Arabidopsis thaliana	8e-83	259	293	48.12
ATR_00153G00150	Amborella trichopoda	1e-59	197	239	43.51
AT3G04370	Arabidopsis thaliana	1e-49	173	321	34.58
ATR_00010G01130	Amborella trichopoda	8e-34	130	292	31.85
AT5G37660	Arabidopsis thaliana	6e-31	123	234	32.91
OS04G45460	Oryza sativa	2e-29	118	287	27.18
OS02G43000	Oryza sativa	3e-29	118	265	29.06
ATR_00011G01470	Amborella trichopoda	1e-28	116	234	33.33
AT1G70690	Arabidopsis thaliana	9e-26	108	303	30.36
AT3G60720	Arabidopsis thaliana	1e-25	107	279	27.60
AT2G01660	Arabidopsis thaliana	3e-25	106	286	29.37
OS06G14280	Oryza sativa	6e-18	85.9	295	26.10
OS02G50200	Oryza sativa	3e-16	80.5	204	28.92
AT5G48540	Arabidopsis thaliana	9e-14	73.6	253	24.51
AT5G41290	Arabidopsis thaliana	3e-10	63.9	245	25.31
AT5G40380	Arabidopsis thaliana	4e-10	64.7	236	28.81
ATR_00085G00940	Amborella trichopoda	7e-10	63.5	237	28.69
ATR_00029G01480	Amborella trichopoda	8e-10	63.5	284	22.89
OS08G04210	Oryza sativa	1e-09	62.0	169	27.22
ATR_00007G03410	Amborella trichopoda	1e-09	62.4	199	28.14
ATR_00060G00290	Amborella trichopoda	2e-09	61.2	217	25.81
ATR_00010G01140	Amborella trichopoda	4e-09	58.9	163	23.93
ATR_00085G00950	Amborella trichopoda	6e-09	60.8	238	28.15
OS08G04250	Oryza sativa	7e-09	59.7	176	25.57
ATR_01216G00010	Amborella trichopoda	2e-08	59.3	270	23.33
ATR_00085G00930	Amborella trichopoda	2e-08	58.9	213	26.76
OS08G04230	Oryza sativa	3e-08	58.2	179	26.82
OS08G04240	Oryza sativa	3e-08	57.8	169	25.44
AT1G61750	Arabidopsis thaliana	3e-08	58.2	202	24.75
AT4G23160	Arabidopsis thaliana	4e-08	58.5	299	25.08
ATR_00060G00320	Amborella trichopoda	5e-08	57.0	255	23.53
ATR_00079G00630	Amborella trichopoda	8e-08	57.4	180	25.56
AT1G19090	Arabidopsis thaliana	1e-07	56.6	205	23.90
AT4G21410	Arabidopsis thaliana	2e-07	56.2	254	24.02
OS03G16950	Oryza sativa	2e-07	55.1	186	24.73
AT4G23270	Arabidopsis thaliana	3e-07	55.5	202	25.25
ATR_00106G00140	Amborella trichopoda	4e-07	53.9	170	25.29
AT4G05200	Arabidopsis thaliana	4e-07	55.1	165	24.85
ATR_00019G03710	Amborella trichopoda	6e-07	54.7	242	23.97
AT5G41300	Arabidopsis thaliana	9e-07	53.5	223	26.01
ATR_00106G00110	Amborella trichopoda	1e-06	52.8	171	23.39
ATR_00085G00960	Amborella trichopoda	1e-06	53.5	217	27.65
ATR_00035G00120	Amborella trichopoda	1e-06	52.8	194	26.80
AT5G41280	Arabidopsis thaliana	6e-06	50.8	189	26.98
AT4G23310	Arabidopsis thaliana	6e-06	51.6	240	23.75
ATR_00035G00090	Amborella trichopoda	7e-06	50.4	193	23.32
ATR_00085G00920	Amborella trichopoda	8e-06	51.2	281	24.91

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment