Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G23340	Arabidopsis thaliana	0.0	853	410	100.00
AT1G70550	Arabidopsis thaliana	0.0	694	376	85.11
AT1G10750	Arabidopsis thaliana	0.0	620	387	74.42
AT5G50150	Arabidopsis thaliana	0.0	593	380	73.42
OS06G28000	Oryza sativa	0.0	576	407	65.85
OS01G36660	Oryza sativa	0.0	568	393	68.45
OS01G07570	Oryza sativa	0.0	528	393	66.67
OS05G07764	Oryza sativa	4e-179	514	410	60.73
AT5G18460	Arabidopsis thaliana	6e-162	469	393	57.00
ATR_00120G00160	Amborella trichopoda	2e-160	465	381	60.37
AT1G55360	Arabidopsis thaliana	7e-160	464	423	55.08
ATR_00068G00250	Amborella trichopoda	8e-156	454	381	56.43
AT3G13510	Arabidopsis thaliana	2e-155	452	421	53.68
PP00117G00640	Physcomitrella patens	7e-154	449	415	52.53
OS07G10530	Oryza sativa	2e-151	442	381	55.38
OS07G38590	Oryza sativa	6e-150	439	379	55.41
OS03G59240	Oryza sativa	4e-147	431	375	54.67
AT5G56530	Arabidopsis thaliana	2e-146	430	379	54.88
PP00293G00070	Physcomitrella patens	3e-144	424	401	53.37
OS08G45170	Oryza sativa	1e-139	413	388	54.38
AT2G44210	Arabidopsis thaliana	1e-137	408	414	50.24
AT2G44220	Arabidopsis thaliana	4e-130	387	381	50.66
AT2G44240	Arabidopsis thaliana	3e-114	347	381	48.03
OS06G16640	Oryza sativa	2e-113	345	414	45.65
OS01G37000	Oryza sativa	2e-112	342	398	46.98
AT2G17750	Arabidopsis thaliana	1e-110	337	373	44.77
AT2G19360	Arabidopsis thaliana	2e-110	338	394	46.19
AT3G48230	Arabidopsis thaliana	1e-109	334	382	47.12
OS01G37020	Oryza sativa	1e-107	329	395	46.08
AT2G44250	Arabidopsis thaliana	3e-100	311	420	41.90
AT5G19170	Arabidopsis thaliana	2e-99	308	349	45.27
ATR_00085G00300	Amborella trichopoda	7e-99	302	203	72.41
ATR_00016G00300	Amborella trichopoda	2e-95	296	324	45.99
PP00402G00070	Physcomitrella patens	7e-74	243	423	34.75
AT5G25950	Arabidopsis thaliana	1e-73	243	394	36.80
ATR_00085G00290	Amborella trichopoda	9e-70	223	129	76.74
AT2G20170	Arabidopsis thaliana	1e-69	231	404	34.16
ATR_00016G00270	Amborella trichopoda	8e-66	216	245	44.90
AT4G23380	Arabidopsis thaliana	2e-64	218	417	33.81
AT5G25960	Arabidopsis thaliana	3e-63	213	372	36.56
AT4G23350	Arabidopsis thaliana	8e-60	206	393	32.57
AT4G23370	Arabidopsis thaliana	1e-58	211	391	32.99
ATR_00016G00240	Amborella trichopoda	2e-57	197	336	38.10
AT4G23390	Arabidopsis thaliana	2e-57	199	365	35.34
AT4G23360	Arabidopsis thaliana	3e-57	206	391	33.76
PP00059G00910	Physcomitrella patens	1e-54	192	415	32.53
OS04G12639	Oryza sativa	6e-50	179	375	32.80
OS01G74160	Oryza sativa	6e-49	175	380	33.68
OS11G10920	Oryza sativa	2e-47	172	356	32.30
OS02G54960	Oryza sativa	6e-46	167	337	33.83
AT2G38255	Arabidopsis thaliana	3e-45	165	349	33.52
PP00055G01050	Physcomitrella patens	2e-44	165	384	32.03
AT2G35250	Arabidopsis thaliana	8e-44	161	341	31.09
OS05G27500	Oryza sativa	1e-43	160	321	34.58
AT4G17505	Arabidopsis thaliana	8e-43	158	355	31.55
OS11G18140	Oryza sativa	2e-42	158	359	30.92
AT4G15050	Arabidopsis thaliana	4e-42	158	418	30.86
AT1G10190	Arabidopsis thaliana	9e-40	151	398	31.16
AT4G15053	Arabidopsis thaliana	1e-36	143	421	29.22
AT2G27320	Arabidopsis thaliana	5e-36	139	293	32.08
OS12G29370	Oryza sativa	1e-34	135	260	32.69
AT4G10220	Arabidopsis thaliana	1e-34	137	420	28.57
AT5G46810	Arabidopsis thaliana	4e-34	135	354	27.68
OS08G31740	Oryza sativa	7e-33	133	339	30.09
AT2G24950	Arabidopsis thaliana	1e-32	131	371	27.76
AT5G05030	Arabidopsis thaliana	2e-31	127	361	28.53
AT5G60380	Arabidopsis thaliana	3e-31	127	356	28.65
AT5G25410	Arabidopsis thaliana	2e-30	124	355	27.61
AT5G46820	Arabidopsis thaliana	3e-30	124	351	26.21
OS02G55230	Oryza sativa	3e-29	121	350	28.86
AT5G46200	Arabidopsis thaliana	5e-29	120	410	26.10
AT4G10210	Arabidopsis thaliana	6e-28	117	406	26.35
PP00124G00060	Physcomitrella patens	1e-27	115	311	29.90
AT4G17860	Arabidopsis thaliana	5e-27	114	346	28.03
OS06G45920	Oryza sativa	2e-25	107	214	34.11
OS07G24050	Oryza sativa	2e-24	105	214	31.31
AT5G11660	Arabidopsis thaliana	1e-23	103	292	29.45
OS02G55210	Oryza sativa	1e-22	101	202	32.18
ATR_00001G01060	Amborella trichopoda	2e-22	95.5	110	48.18
AT5G25415	Arabidopsis thaliana	8e-22	99.0	246	30.89
AT2G03930	Arabidopsis thaliana	1e-21	95.1	103	46.60
AT5G36680	Arabidopsis thaliana	4e-21	97.1	294	27.55
AT5G36770	Arabidopsis thaliana	4e-21	97.1	294	27.55
ATR_00016G00190	Amborella trichopoda	7e-21	94.0	110	36.36
ATR_00016G00170	Amborella trichopoda	6e-20	91.3	119	38.66
OS07G08240	Oryza sativa	6e-19	90.1	244	30.33
OS01G61800	Oryza sativa	1e-18	89.7	244	31.97
OS11G11530	Oryza sativa	2e-18	89.0	251	31.47
PP00063G00860	Physcomitrella patens	8e-17	84.7	359	25.63
OS01G26320	Oryza sativa	1e-16	82.8	129	38.76
ATR_00016G00130	Amborella trichopoda	3e-16	79.7	126	41.27
OS12G32040	Oryza sativa	9e-15	77.8	243	29.63
OS11G11620	Oryza sativa	4e-13	72.8	197	32.49
OS02G55220	Oryza sativa	1e-11	68.2	201	30.35
ATR_00016G00120	Amborella trichopoda	3e-11	64.7	101	38.61
AT5G37520	Arabidopsis thaliana	1e-10	64.3	177	28.81
ATR_00016G00220	Amborella trichopoda	7e-10	61.2	102	38.24
ATR_00016G00180	Amborella trichopoda	2e-09	59.3	102	40.20
ATR_00016G00160	Amborella trichopoda	3e-08	56.2	90	35.56
OS11G03810	Oryza sativa	1e-06	52.0	105	29.52

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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