Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G22070	Arabidopsis thaliana	0.0	795	385	100.00
AT1G77920	Arabidopsis thaliana	0.0	559	384	72.14
AT5G65210	Arabidopsis thaliana	1e-141	415	383	57.96
AT5G10030	Arabidopsis thaliana	2e-139	409	378	57.14
OS04G54474	Oryza sativa	6e-118	355	386	50.52
ATR_00010G02650	Amborella trichopoda	1e-117	353	376	51.60
PP00258G00030	Physcomitrella patens	6e-117	351	340	55.59
ATR_00095G00330	Amborella trichopoda	2e-114	348	306	58.50
PP00126G01000	Physcomitrella patens	6e-112	338	348	51.44
OS01G17260	Oryza sativa	2e-111	336	303	58.09
PP00030G01620	Physcomitrella patens	1e-110	335	342	55.85
OS01G59350	Oryza sativa	6e-110	337	303	57.76
OS07G48820	Oryza sativa	1e-109	332	292	57.53
ATR_00010G00140	Amborella trichopoda	1e-108	333	311	54.98
OS03G20310	Oryza sativa	2e-108	328	292	57.19
AT3G12250	Arabidopsis thaliana	2e-107	327	307	55.05
AT5G06950	Arabidopsis thaliana	2e-107	326	302	55.30
ATR_00031G00020	Amborella trichopoda	2e-107	331	293	55.63
ATR_00022G02590	Amborella trichopoda	7e-105	325	303	54.46
OS11G05480	Oryza sativa	2e-104	323	291	56.70
OS06G15480	Oryza sativa	4e-103	317	299	55.18
AT1G08320	Arabidopsis thaliana	2e-102	318	290	55.86
OS08G07970	Oryza sativa	5e-102	315	322	51.55
AT5G06960	Arabidopsis thaliana	6e-102	312	292	55.82
OS01G64020	Oryza sativa	3e-100	314	298	52.68
OS12G05680	Oryza sativa	3e-99	310	354	48.59
AT5G06839	Arabidopsis thaliana	3e-99	309	312	52.88
AT1G68640	Arabidopsis thaliana	6e-95	298	291	55.67
OS05G37170	Oryza sativa	7e-94	298	309	49.19
OS05G41280	Oryza sativa	4e-90	281	307	50.16
PP00257G00610	Physcomitrella patens	8e-82	260	292	49.32
OS09G10840	Oryza sativa	9e-81	261	299	45.48
OS09G31390	Oryza sativa	1e-80	263	303	47.52
OS06G41100	Oryza sativa	6e-60	206	305	40.66
OS02G10140	Oryza sativa	6e-40	149	172	47.09
OS10G41640	Oryza sativa	1e-22	97.1	107	49.53
ATR_00130G00570	Amborella trichopoda	4e-17	84.0	212	25.94
CV00G51650	Coccomyxa subellipsoidea C-169	2e-15	81.6	322	26.09
AT1G58330	Arabidopsis thaliana	3e-14	75.5	231	27.27
PP00074G00040	Physcomitrella patens	4e-14	77.8	235	25.96
PP00005G00960	Physcomitrella patens	7e-14	77.0	234	25.64
AT3G14880	Arabidopsis thaliana	7e-11	65.9	220	23.64
OS01G06560	Oryza sativa	8e-11	65.9	190	28.42
PP00357G00110	Physcomitrella patens	1e-10	67.0	233	24.46
OS01G65970	Oryza sativa	2e-08	57.0	80	43.75
AT4G18690	Arabidopsis thaliana	2e-06	53.1	225	20.89
PP00039G01700	Physcomitrella patens	6e-06	49.7	146	23.29

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment