Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G17545	Arabidopsis thaliana	6e-129	367	180	100.00
AT1G72770	Arabidopsis thaliana	8e-25	104	243	34.98
AT1G17550	Arabidopsis thaliana	9e-24	101	64	82.81
OS01G40094	Oryza sativa	7e-18	84.7	149	38.93
OS05G51510	Oryza sativa	1e-15	78.2	150	34.67
ATR_00146G00580	Amborella trichopoda	6e-15	76.6	142	35.21
AT4G26080	Arabidopsis thaliana	5e-14	73.6	112	37.50
OS05G46040	Oryza sativa	8e-13	69.3	48	66.67
AT5G57050	Arabidopsis thaliana	5e-11	64.3	115	35.65
PP00080G00060	Physcomitrella patens	2e-10	62.8	58	51.72
PP00311G00380	Physcomitrella patens	3e-10	62.4	58	53.45
ATR_00012G03070	Amborella trichopoda	2e-09	59.7	87	41.38
AT2G29380	Arabidopsis thaliana	3e-08	55.8	133	30.83
AT3G11410	Arabidopsis thaliana	2e-07	53.5	52	55.77
OS03G16170	Oryza sativa	3e-07	53.1	52	50.00
ATR_00009G01250	Amborella trichopoda	3e-07	52.8	43	55.81
AT1G07430	Arabidopsis thaliana	4e-07	52.8	57	47.37
ATR_00039G02200	Amborella trichopoda	4e-07	52.4	46	52.17
OS05G49730	Oryza sativa	6e-07	52.0	42	61.90
OS01G46760	Oryza sativa	8e-07	51.6	43	60.47
ATR_00056G00960	Amborella trichopoda	9e-07	51.6	48	54.17
CR02G13340	Chlamydomonas reinhardtii	2e-06	50.4	54	46.30

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment