Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G01070	Arabidopsis thaliana	0.0	746	366	100.00
AT1G11460	Arabidopsis thaliana	0.0	552	338	77.51
AT4G01430	Arabidopsis thaliana	0.0	514	356	71.63
AT1G11450	Arabidopsis thaliana	5e-169	481	301	79.40
AT4G01440	Arabidopsis thaliana	2e-117	352	348	53.16
AT4G01450	Arabidopsis thaliana	1e-100	309	323	52.01
AT3G30340	Arabidopsis thaliana	5e-97	300	354	41.53
OS02G01326	Oryza sativa	2e-77	248	353	38.24
OS06G01972	Oryza sativa	1e-69	229	357	36.69
OS06G01840	Oryza sativa	5e-69	227	336	38.99
OS06G01966	Oryza sativa	3e-68	225	330	37.88
AT1G09380	Arabidopsis thaliana	1e-64	216	355	32.68
ATR_00018G00590	Amborella trichopoda	3e-63	211	304	35.20
OS01G19290	Oryza sativa	7e-60	204	331	35.65
AT1G75500	Arabidopsis thaliana	2e-59	203	365	31.23
OS04G34530	Oryza sativa	8e-59	200	354	33.90
ATR_00103G00780	Amborella trichopoda	2e-58	199	351	35.33
OS04G34490	Oryza sativa	2e-58	200	331	36.56
OS05G33900	Oryza sativa	6e-58	200	333	34.23
OS04G59120	Oryza sativa	2e-57	198	355	33.80
ATR_00040G00110	Amborella trichopoda	3e-57	197	352	36.36
OS02G02310	Oryza sativa	3e-57	197	320	34.69
ATR_00018G00650	Amborella trichopoda	5e-56	193	344	34.59
OS08G44750	Oryza sativa	8e-56	193	317	34.38
ATR_00055G00550	Amborella trichopoda	2e-55	194	359	31.20
ATR_00019G01230	Amborella trichopoda	2e-55	191	363	32.23
ATR_00040G00170	Amborella trichopoda	2e-55	191	335	33.73
AT4G08290	Arabidopsis thaliana	4e-55	191	363	33.88
OS01G58910	Oryza sativa	5e-55	192	356	32.02
ATR_00103G00770	Amborella trichopoda	5e-55	190	341	33.14
AT3G18200	Arabidopsis thaliana	1e-54	189	361	31.86
ATR_00006G02260	Amborella trichopoda	2e-54	189	350	32.29
ATR_00040G00080	Amborella trichopoda	3e-54	188	354	32.49
AT3G53210	Arabidopsis thaliana	5e-54	188	357	31.09
ATR_00120G00470	Amborella trichopoda	2e-53	187	335	32.84
OS07G34070	Oryza sativa	3e-53	186	322	34.47
OS10G14920	Oryza sativa	3e-53	186	358	31.28
OS01G02870	Oryza sativa	5e-53	186	335	32.24
ATR_00017G00370	Amborella trichopoda	9e-53	186	355	30.42
ATR_00131G00650	Amborella trichopoda	2e-52	185	347	32.85
AT4G30420	Arabidopsis thaliana	2e-52	184	354	32.20
AT4G08300	Arabidopsis thaliana	9e-52	182	347	31.99
AT1G25270	Arabidopsis thaliana	1e-51	181	350	32.00
OS05G41420	Oryza sativa	3e-51	182	336	31.25
ATR_00009G01030	Amborella trichopoda	1e-50	179	357	29.13
OS01G19240	Oryza sativa	6e-50	177	358	29.89
ATR_00018G00620	Amborella trichopoda	1e-49	174	306	35.29
OS03G05530	Oryza sativa	1e-49	176	365	30.68
AT5G07050	Arabidopsis thaliana	3e-49	176	354	31.07
ATR_00006G01130	Amborella trichopoda	5e-49	174	297	35.02
ATR_00055G00430	Amborella trichopoda	3e-48	172	365	32.60
ATR_00088G01570	Amborella trichopoda	4e-48	172	355	27.04
ATR_00055G00610	Amborella trichopoda	4e-48	172	325	28.31
AT5G13670	Arabidopsis thaliana	8e-48	172	361	29.64
OS01G36580	Oryza sativa	5e-47	169	313	34.50
AT1G68170	Arabidopsis thaliana	3e-46	167	339	31.56
OS07G34110	Oryza sativa	7e-46	166	354	33.33
OS12G18960	Oryza sativa	9e-46	166	340	29.12
ATR_00011G01770	Amborella trichopoda	1e-45	166	342	31.29
AT2G37460	Arabidopsis thaliana	1e-45	166	357	31.37
AT2G39510	Arabidopsis thaliana	2e-45	165	358	29.33
OS12G33300	Oryza sativa	3e-45	165	354	27.97
AT1G44800	Arabidopsis thaliana	4e-45	164	331	31.72
ATR_00055G00410	Amborella trichopoda	5e-45	164	340	30.29
ATR_00131G00630	Amborella trichopoda	8e-45	162	287	34.15
ATR_00055G00580	Amborella trichopoda	1e-44	162	306	30.39
AT1G21890	Arabidopsis thaliana	3e-44	162	333	31.53
OS02G47500	Oryza sativa	6e-44	162	323	31.58
AT5G45370	Arabidopsis thaliana	1e-43	160	336	31.55
OS09G25810	Oryza sativa	3e-43	159	338	28.70
AT2G40900	Arabidopsis thaliana	4e-43	160	331	29.91
AT5G64700	Arabidopsis thaliana	4e-43	159	335	31.64
AT4G28040	Arabidopsis thaliana	2e-42	157	345	30.72
ATR_00019G03890	Amborella trichopoda	4e-42	156	362	27.62
PP00298G00300	Physcomitrella patens	2e-41	154	357	31.09
AT5G40210	Arabidopsis thaliana	4e-41	153	344	31.69
ATR_00088G01560	Amborella trichopoda	6e-41	153	323	29.72
AT3G28050	Arabidopsis thaliana	1e-40	152	353	30.31
OS06G49500	Oryza sativa	1e-40	153	368	30.16
AT5G40240	Arabidopsis thaliana	6e-40	150	323	31.27
AT1G43650	Arabidopsis thaliana	1e-39	149	320	31.25
OS01G36560	Oryza sativa	1e-39	149	325	31.69
ATR_00055G00590	Amborella trichopoda	2e-39	147	272	30.88
OS04G38430	Oryza sativa	4e-39	145	248	35.08
ATR_00040G00060	Amborella trichopoda	4e-39	147	298	29.87
AT5G40230	Arabidopsis thaliana	5e-39	148	353	31.16
ATR_00131G00660	Amborella trichopoda	7e-39	146	349	29.23
AT3G45870	Arabidopsis thaliana	2e-38	146	336	29.17
AT3G56620	Arabidopsis thaliana	2e-38	146	328	30.18
ATR_00055G00400	Amborella trichopoda	3e-38	145	350	30.29
OS02G52930	Oryza sativa	4e-38	145	333	27.33
OS05G01570	Oryza sativa	1e-37	144	352	28.98
OS06G10750	Oryza sativa	1e-37	144	371	28.84
ATR_00018G00600	Amborella trichopoda	1e-37	144	363	29.48
AT4G19185	Arabidopsis thaliana	3e-37	144	331	30.51
OS01G10990	Oryza sativa	1e-36	141	331	29.61
AT1G70260	Arabidopsis thaliana	2e-36	141	366	26.78
PP00091G01100	Physcomitrella patens	4e-36	140	352	29.26
OS08G31130	Oryza sativa	4e-35	137	303	28.05
PP00040G00770	Physcomitrella patens	4e-35	137	354	25.99
OS07G34320	Oryza sativa	1e-34	137	334	31.44
PP00046G00140	Physcomitrella patens	2e-34	135	322	30.43
PP00263G00360	Physcomitrella patens	2e-33	133	360	27.50
OS10G07998	Oryza sativa	4e-33	131	337	27.30
PP00284G00220	Physcomitrella patens	1e-32	130	345	27.83
ATR_00106G00870	Amborella trichopoda	2e-32	129	346	26.01
AT1G60050	Arabidopsis thaliana	2e-32	130	366	28.69
OS10G12190	Oryza sativa	2e-31	127	370	25.41
AT4G15540	Arabidopsis thaliana	6e-31	125	262	31.68
AT2G37450	Arabidopsis thaliana	2e-30	123	356	26.69
OS01G36590	Oryza sativa	2e-29	120	230	32.61
OS06G01660	Oryza sativa	3e-29	120	324	28.70
ATR_00055G00490	Amborella trichopoda	9e-29	118	353	24.36
OS09G25770	Oryza sativa	2e-28	118	352	27.56
PP00294G00080	Physcomitrella patens	1e-27	116	333	25.23
AT3G28100	Arabidopsis thaliana	4e-27	114	336	27.68
OS09G25784	Oryza sativa	7e-27	112	225	29.33
AT3G28130	Arabidopsis thaliana	8e-27	113	339	25.96
OS01G10970	Oryza sativa	1e-26	112	335	31.04
AT3G28070	Arabidopsis thaliana	1e-26	112	264	26.52
PP00032G00340	Physcomitrella patens	2e-26	112	325	25.54
OS10G12400	Oryza sativa	2e-26	109	203	30.54
OS01G10980	Oryza sativa	3e-26	112	367	30.25
OS12G03920	Oryza sativa	5e-25	107	355	23.94
MRCC299_10G04240	Micromonas sp RCC299	7e-25	108	362	25.69
AT5G47470	Arabidopsis thaliana	2e-24	106	366	27.05
AT3G28080	Arabidopsis thaliana	4e-24	105	263	25.48
OS10G12500	Oryza sativa	3e-23	102	314	24.20
ATR_00055G00530	Amborella trichopoda	1e-22	98.2	207	29.47
ATR_00101G00820	Amborella trichopoda	2e-22	95.9	119	41.18
ATR_00018G00640	Amborella trichopoda	3e-22	97.4	174	33.33
ATR_00055G00390	Amborella trichopoda	7e-22	96.3	186	30.65
ATR_00074G00710	Amborella trichopoda	1e-21	97.1	237	27.00
OS11G04140	Oryza sativa	1e-21	96.7	230	25.22
OS02G22680	Oryza sativa	3e-21	95.9	137	39.42
AT4G16620	Arabidopsis thaliana	2e-20	94.7	337	26.11
OS05G28930	Oryza sativa	1e-19	91.7	261	26.82
OS11G37720	Oryza sativa	1e-17	87.8	343	23.62
ATR_00131G00610	Amborella trichopoda	1e-17	85.9	199	29.65
AT4G24980	Arabidopsis thaliana	1e-17	85.5	309	26.21
OS05G01580	Oryza sativa	1e-17	85.9	325	25.23
ATR_00131G00590	Amborella trichopoda	2e-16	80.9	199	30.65
OS09G25800	Oryza sativa	7e-16	79.7	207	26.09
OS07G30210	Oryza sativa	1e-13	75.5	324	22.22
ATR_00040G00120	Amborella trichopoda	1e-13	72.4	125	33.60
ATR_00055G00560	Amborella trichopoda	3e-13	71.2	133	28.57
ATR_00007G03520	Amborella trichopoda	6e-13	69.3	115	33.04
OS07G34340	Oryza sativa	2e-11	68.2	135	34.81
ATR_00019G03880	Amborella trichopoda	2e-11	67.0	206	24.27
ATR_00074G00990	Amborella trichopoda	1e-10	62.8	96	30.21
ATR_00066G00460	Amborella trichopoda	2e-09	60.1	155	25.81
AT3G28060	Arabidopsis thaliana	3e-09	60.5	123	28.46
ATR_00055G00510	Amborella trichopoda	1e-08	57.8	88	32.95
OS10G09710	Oryza sativa	2e-08	56.6	90	33.33

External Sequences (optional)

External Sequences Type

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MSA algorithm
Tree construction algorithm
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