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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G104340
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G104340
Synedra acus
0.0e+00
1679.8
997
100.0
ptri189680
Phaeodactylum tricornutum
5.7e-219
762.7
757
56.4
PSNMU-V1.4_AUG-EV-PASAV3_0003950
Pseudo-nitzschia multistriata
6.8e-204
712.6
729
55.1
CC00G192210
Cyclotella cryptica
2.0e-203
711.1
846
49.8
ps00G38170
Pseudo-nitzschia multiseries
4.9e-202
706.4
703
56.2
fso90670
Fistulifera solaris
9.2e-201
702.2
693
56.9
tps06310
Thalassiosira pseudonana
1.4e-196
688.3
891
49.6
Sro827_g207800
Seminavis robusta
1.2e-195
685.3
720
54.3
fso146520
Fistulifera solaris
8.3e-194
679.1
693
55.0
gene44
Fragilariopsis cylindrus
2.9e-178
627.5
545
59.1
gene9114
Fragilariopsis cylindrus
5.4e-177
623.2
524
60.3
tho264820
Thalassiosira oceanica
9.0e-148
526.2
786
42.9
Ec-04_004310
Ectocarpus siliculosus
7.2e-113
410.2
718
40.9
AA0002G01460
Aureococcus anophagefferens
5.4e-100
367.5
513
40.9
ENSG00000035928
Homo sapiens
3.7e-85
318.2
735
33.2
AT5G22010
Arabidopsis thaliana
3.2e-76
288.5
704
31.2
Pp3c22_21030
Physcomitrella patens
3.2e-76
288.5
700
33.0
Cre12.g521200
Chlamydomonas reinhardtii
5.4e-76
287.7
734
34.6
SPBC23E6.07c
Schizosaccharomyces pombe
9.2e-76
287.0
688
33.1
gsu106230
Galdieria sulphuraria
1.0e-74
283.5
828
29.3
YOR217W
Saccharomyces cerevisiae strain S288C
3.1e-71
271.9
727
31.5
FBgn0004913
Drosophila melanogaster
4.4e-70
268.1
740
34.5
gene43
Fragilariopsis cylindrus
1.2e-67
260.0
227
55.9
emh328310
Emiliania huxleyi
1.1e-65
253.4
515
33.6
WBGene00004337
Caenorhabditis elegans
4.3e-65
251.5
525
33.7
ccr96820
Chondrus crispus
2.8e-64
248.8
729
29.5
pte254120
Paramecium tetraurelia
5.1e-58
228.0
775
27.6
CM18G00280
Cyanidioschyzon merolae
2.5e-57
225.7
739
28.3
pte687580
Paramecium tetraurelia
1.8e-55
219.5
715
27.6
pte616020
Paramecium tetraurelia
3.3e-41
172.2
505
28.9
pte690410
Paramecium tetraurelia
1.6e-40
169.9
516
29.1
AT1G04730
Arabidopsis thaliana
1.3e-21
107.1
426
26.5
FBgn0015376
Drosophila melanogaster
1.9e-20
103.2
317
26.2
YMR078C
Saccharomyces cerevisiae strain S288C
7.9e-19
97.8
299
26.1
ENSG00000127586
Homo sapiens
3.0e-18
95.9
367
27.0
WBGene00010676
Caenorhabditis elegans
3.9e-18
95.5
314
27.1
Pp3c7_23730
Physcomitrella patens
3.3e-17
92.4
421
25.7
SPBC902.02c
Schizosaccharomyces pombe
5.7e-17
91.7
299
23.7
sya00G110730
Synedra acus
1.3e-16
90.5
306
28.4
AT1G77620
Arabidopsis thaliana
3.7e-16
89.0
284
27.5
ptri150740
Phaeodactylum tricornutum
1.4e-15
87.0
354
28.0
CC00G48690
Cyclotella cryptica
1.8e-15
86.7
318
24.5
fso173840
Fistulifera solaris
2.4e-15
86.3
266
28.9
fso141240
Fistulifera solaris
5.3e-15
85.1
266
27.4
PSNMU-V1.4_AUG-EV-PASAV3_0062320
Pseudo-nitzschia multistriata
5.3e-15
85.1
323
26.0
Naga_100156g15
Nannochloropsis gaditana
9.1e-15
84.3
211
29.9
tps156960
Thalassiosira pseudonana
9.1e-15
84.3
336
25.3
Pp3c3_37360
Physcomitrella patens
1.2e-14
84.0
234
28.6
Pp3c12_8350
Physcomitrella patens
3.5e-14
82.4
301
25.6
ps00G182550
Pseudo-nitzschia multiseries
2.9e-13
79.3
371
25.1
AT1G63160
Arabidopsis thaliana
5.0e-13
78.6
342
25.7
Cre16.g686950
Chlamydomonas reinhardtii
6.5e-13
78.2
315
22.2
pte66270
Paramecium tetraurelia
6.5e-13
78.2
238
26.5
PSNMU-V1.4_AUG-EV-PASAV3_0119840
Pseudo-nitzschia multistriata
1.1e-12
77.4
256
27.7
gene2388
Fragilariopsis cylindrus
1.9e-12
76.6
256
27.3
Pp3c13_19570
Physcomitrella patens
2.5e-12
76.3
323
23.2
Pp3c16_21800
Physcomitrella patens
3.2e-12
75.9
266
28.2
CC00G97960
Cyclotella cryptica
5.5e-12
75.1
243
26.3
FBgn0030871
Drosophila melanogaster
7.2e-12
74.7
259
27.4
ENSG00000049541
Homo sapiens
7.2e-12
74.7
253
27.3
YOL094C
Saccharomyces cerevisiae strain S288C
7.2e-12
74.7
235
28.9
AT1G21690
Arabidopsis thaliana
9.4e-12
74.3
251
27.1
emh490460
Emiliania huxleyi
1.2e-11
73.9
234
26.9
gene13290
Fragilariopsis cylindrus
1.2e-11
73.9
249
26.9
Pp3c13_4510
Physcomitrella patens
1.2e-11
73.9
233
27.0
emh456660
Emiliania huxleyi
2.7e-11
72.8
234
26.5
Sro730_g194110
Seminavis robusta
3.6e-11
72.4
239
25.9
WBGene00004338
Caenorhabditis elegans
4.7e-11
72.0
235
28.5
ptri147210
Phaeodactylum tricornutum
4.7e-11
72.0
240
25.8
tho264840
Thalassiosira oceanica
4.7e-11
72.0
60
66.7
ptri32500
Phaeodactylum tricornutum
6.1e-11
71.6
233
26.2
YNL290W
Saccharomyces cerevisiae strain S288C
6.1e-11
71.6
234
26.9
sya00G13320
Synedra acus
6.1e-11
71.6
275
25.8
Cre07.g337150
Chlamydomonas reinhardtii
1.0e-10
70.9
235
27.2
fso168430
Fistulifera solaris
1.0e-10
70.9
245
26.5
pte259470
Paramecium tetraurelia
1.0e-10
70.9
279
25.8
fso151940
Fistulifera solaris
1.4e-10
70.5
245
26.5
PSNMU-V1.4_AUG-EV-PASAV3_0005500
Pseudo-nitzschia multistriata
1.4e-10
70.5
297
26.9
FBgn0260985
Drosophila melanogaster
1.8e-10
70.1
234
24.4
ENSG00000111445
Homo sapiens
1.8e-10
70.1
246
26.8
pte233530
Paramecium tetraurelia
1.8e-10
70.1
277
26.4
gsu38630
Galdieria sulphuraria
2.3e-10
69.7
235
26.8
Cre06.g251800
Chlamydomonas reinhardtii
3.0e-10
69.3
245
28.2
Ec-08_003900
Ectocarpus siliculosus
3.0e-10
69.3
247
26.3
ps00G185310
Pseudo-nitzschia multiseries
4.0e-10
68.9
271
25.8
CM06G01100
Cyanidioschyzon merolae
5.2e-10
68.6
234
25.6
Cre12.g527300
Chlamydomonas reinhardtii
5.2e-10
68.6
262
25.2
ccr162100
Chondrus crispus
8.8e-10
67.8
244
24.6
SPAC1687.03c
Schizosaccharomyces pombe
1.1e-09
67.4
234
25.2
sya00G204900
Synedra acus
1.1e-09
67.4
235
24.7
CM12G03070
Cyanidioschyzon merolae
1.5e-09
67.0
252
25.0
SPBC947.11c
Schizosaccharomyces pombe
3.3e-09
65.9
366
20.5
Ec-02_004800
Ectocarpus siliculosus
4.4e-09
65.5
234
25.2
Naga_100080g2
Nannochloropsis gaditana
5.7e-09
65.1
224
26.8
WBGene00018409
Caenorhabditis elegans
7.5e-09
64.7
243
25.1
fso30010
Fistulifera solaris
1.7e-08
63.5
325
24.3
AA0004G04040
Aureococcus anophagefferens
2.2e-08
63.2
251
27.1
CC00G48970
Cyclotella cryptica
2.2e-08
63.2
234
25.2
ENSG00000176208
Homo sapiens
2.8e-08
62.8
139
28.8
ccr38980
Chondrus crispus
3.7e-08
62.4
233
24.0
fso121290
Fistulifera solaris
4.8e-08
62.0
287
24.4
AA0020G00120
Aureococcus anophagefferens
6.3e-08
61.6
182
28.6
Ec-02_003410
Ectocarpus siliculosus
8.2e-08
61.2
233
25.8
emh282200
Emiliania huxleyi
1.1e-07
60.8
234
26.1
AA0011G02360
Aureococcus anophagefferens
1.4e-07
60.5
234
25.2
AT1G77470
Arabidopsis thaliana
1.8e-07
60.1
257
25.7
tho295520
Thalassiosira oceanica
1.8e-07
60.1
234
25.2
tps213810
Thalassiosira pseudonana
2.4e-07
59.7
235
25.1
Sro1156_g247260
Seminavis robusta
7.0e-07
58.2
306
21.2
Naga_100413g2
Nannochloropsis gaditana
9.1e-07
57.8
294
23.1
FBgn0036574
Drosophila melanogaster
1.2e-06
57.4
284
24.6
PSNMU-V1.4_AUG-EV-PASAV3_0124040
Pseudo-nitzschia multistriata
1.2e-06
57.4
109
34.9
CM15G01450
Cyanidioschyzon merolae
1.6e-06
57.0
236
26.3
emh485910
Emiliania huxleyi
2.0e-06
56.6
254
26.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (3 genes)
Synedra acus (4 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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