Functional clusters

Information

  • Type Gene Ontology
  • Description nucleobase-containing compound catabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 3 CH_ath_149 5 5 0.0000000184594
Arabidopsis thaliana Chr1 4 CH_ath_149 5 5 0.0000000184594

Available child term results

Ontology identifier Description Number of clusters
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 4
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 2
GO:0000292 RNA fragment catabolic process 2
GO:0000737 DNA catabolic process, endonucleolytic 20
GO:0000738 DNA catabolic process, exonucleolytic 6
GO:0006148 inosine catabolic process 4
GO:0006154 adenosine catabolic process 60
GO:0006218 uridine catabolic process 8
GO:0006308 DNA catabolic process 30
GO:0009134 nucleoside diphosphate catabolic process 2
GO:0009143 nucleoside triphosphate catabolic process 6
GO:0009166 nucleotide catabolic process 2
GO:0009972 cytidine deamination 2
GO:0010587 miRNA catabolic process 2
GO:0015938 coenzyme A catabolic process 2
GO:0016075 rRNA catabolic process 6
GO:0019677 NAD catabolic process 4
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 4
GO:0043137 DNA replication, removal of RNA primer 2
GO:0043488 regulation of mRNA stability 2
GO:0048255 mRNA stabilization 2
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 2
GO:0061158 3'-UTR-mediated mRNA destabilization 2
GO:0070478 nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay 4
GO:0070481 nuclear-transcribed mRNA catabolic process, non-stop decay 4
GO:0070966 nuclear-transcribed mRNA catabolic process, no-go decay 16
GO:0071049 nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription 2
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 2
GO:2001294 malonyl-CoA catabolic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001