Functional clusters

Information

  • Type Gene Ontology
  • Description DNA catabolic process, endonucleolytic

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00053 3 CH_atr_206 2 2 0.0000794407
Cenchrus purpureus GWHAORA00000009 3 CH_cpu_404 4 66 0.00000222853
Digitaria exilis Dexi_CM05836_chr05A 3 CH_dex_172 3 3 0.00000000670158
Lolium perenne Lp_chr3_0 3 CH_lpe_59 4 14 0.0000000000997111
Miscanthus sinensis Chr06 3 CH_msi_426 2 2 0.000193193
Miscanthus sinensis Chr05 3 CH_msi_427 2 2 0.000193193
Oropetium thomaeum Chromosome_3 3 CH_oth_160 2 2 0.000213554
Sorghum bicolor Chr03 3 CH_sbi_265 2 2 0.0000586682
Solanum lycopersicum SL4.0ch01 3 CH_sly_332 2 2 0.0000586941
Saccharum spontaneum Chr3D 3 CH_ssp_859 2 2 0.000357884
Amborella trichopoda AmTr_v1.0_scaffold00053 4 CH_atr_206 2 2 0.0000794407
Cenchrus purpureus GWHAORA00000009 4 CH_cpu_404 4 66 0.00000222853
Digitaria exilis Dexi_CM05836_chr05A 4 CH_dex_172 3 3 0.00000000670158
Lolium perenne Lp_chr3_0 4 CH_lpe_59 4 14 0.0000000000997111
Miscanthus sinensis Chr06 4 CH_msi_426 2 2 0.000193193
Miscanthus sinensis Chr05 4 CH_msi_427 2 2 0.000193193
Oropetium thomaeum Chromosome_3 4 CH_oth_160 2 2 0.000213554
Sorghum bicolor Chr03 4 CH_sbi_265 2 2 0.0000586682
Solanum lycopersicum SL4.0ch01 4 CH_sly_332 2 2 0.0000586941
Saccharum spontaneum Chr3D 4 CH_ssp_859 2 2 0.000357884

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001