Functional clusters
Information
- Type Gene Ontology
- Description adenosine catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ceratophyllum demersum | 3 | 3 | CH_cde_102 | 2 | 2 | 0.0000789796 |
| Cenchrus purpureus | GWHAORA00000001 | 3 | CH_cpu_503 | 3 | 9 | 0.0000101097 |
| Digitaria exilis | Dexi_CM05836_chr03B | 3 | CH_dex_171 | 4 | 15 | 0.00000000534688 |
| Digitaria exilis | Dexi_CM05836_chr03A | 3 | CH_dex_419 | 3 | 17 | 0.0000398371 |
| Eragrostis curvula | 7 | 3 | CH_ecu_291 | 3 | 5 | 0.0000000225491 |
| Glycine max | Gm13 | 3 | CH_gma_418 | 2 | 2 | 0.000227734 |
| Hordeum vulgare | chr1H | 3 | CH_hvu_105 | 4 | 23 | 0.0000000017751 |
| Lolium perenne | Lp_chr1_0 | 3 | CH_lpe_228 | 3 | 37 | 0.0000120348 |
| Miscanthus sinensis | Chr16 | 3 | CH_msi_420 | 2 | 2 | 0.000193193 |
| Oryza alta | GWHAZTO00000005 | 3 | CH_oal_654 | 2 | 3 | 0.000362716 |
| Oryza alta | GWHAZTO00000017 | 3 | CH_oal_655 | 2 | 3 | 0.000362716 |
| Oryza brachyantha | 5 | 3 | CH_obr_233 | 2 | 3 | 0.000179195 |
| Oryza sativa Kitaake | Chr5 | 3 | CH_osak_282 | 2 | 2 | 0.0000562857 |
| Oropetium thomaeum | Chromosome_5 | 3 | CH_oth_43 | 3 | 5 | 0.0000000760058 |
| Phyllostachys edulis | hic_scaffold_7 | 3 | CH_ped_243 | 3 | 17 | 0.0000067704 |
| Panicum hallii | Chr03 | 3 | CH_pha_205 | 3 | 25 | 0.0000116431 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_324 | 2 | 2 | 0.0000578001 |
| Sorghum bicolor | Chr09 | 3 | CH_sbi_124 | 3 | 5 | 0.0000000516279 |
| Secale cereale | GWHASIY00000001 | 3 | CH_sce_134 | 4 | 20 | 0.00000000137136 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_1098 | 2 | 3 | 0.000146142 |
| Setaria italica | scaffold_3 | 3 | CH_sit_132 | 4 | 20 | 0.000000014201 |
| Saccharum spontaneum | Chr7B | 3 | CH_ssp_13 | 7 | 17 | 9.31948e-20 |
| Setaria viridis | Chr_03 | 3 | CH_svi_118 | 4 | 20 | 0.0000000103173 |
| Triticum aestivum | Chr1D | 3 | CH_tae_445 | 4 | 17 | 0.0000000154121 |
| Triticum aestivum | Chr1B | 3 | CH_tae_517 | 3 | 3 | 0.0000000866104 |
| Triticum aestivum | Chr1A | 3 | CH_tae_990 | 3 | 16 | 0.0000484606 |
| Triticum dicoccoides | 1B | 3 | CH_tdi_389 | 3 | 29 | 0.0000482528 |
| Triticum turgidum | chr1B | 3 | CH_ttu_229 | 3 | 3 | 0.0000000512815 |
| Triticum turgidum | chr1A | 3 | CH_ttu_450 | 3 | 17 | 0.0000348409 |
| Vanilla planifolia | CM028152.1 | 3 | CH_vpl_257 | 2 | 2 | 0.000221664 |
| Ceratophyllum demersum | 3 | 4 | CH_cde_102 | 2 | 2 | 0.0000789796 |
| Cenchrus purpureus | GWHAORA00000001 | 4 | CH_cpu_503 | 3 | 9 | 0.0000101097 |
| Digitaria exilis | Dexi_CM05836_chr03B | 4 | CH_dex_171 | 4 | 15 | 0.00000000534688 |
| Digitaria exilis | Dexi_CM05836_chr03A | 4 | CH_dex_419 | 3 | 17 | 0.0000398371 |
| Eragrostis curvula | 7 | 4 | CH_ecu_291 | 3 | 5 | 0.0000000225491 |
| Glycine max | Gm13 | 4 | CH_gma_418 | 2 | 2 | 0.000227734 |
| Hordeum vulgare | chr1H | 4 | CH_hvu_105 | 4 | 23 | 0.0000000017751 |
| Lolium perenne | Lp_chr1_0 | 4 | CH_lpe_228 | 3 | 37 | 0.0000120348 |
| Miscanthus sinensis | Chr16 | 4 | CH_msi_420 | 2 | 2 | 0.000193193 |
| Oryza alta | GWHAZTO00000005 | 4 | CH_oal_654 | 2 | 3 | 0.000362716 |
| Oryza alta | GWHAZTO00000017 | 4 | CH_oal_655 | 2 | 3 | 0.000362716 |
| Oryza brachyantha | 5 | 4 | CH_obr_233 | 2 | 3 | 0.000179195 |
| Oryza sativa Kitaake | Chr5 | 4 | CH_osak_282 | 2 | 2 | 0.0000562857 |
| Oropetium thomaeum | Chromosome_5 | 4 | CH_oth_43 | 3 | 5 | 0.0000000760058 |
| Phyllostachys edulis | hic_scaffold_7 | 4 | CH_ped_243 | 3 | 17 | 0.0000067704 |
| Panicum hallii | Chr03 | 4 | CH_pha_205 | 3 | 25 | 0.0000116431 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_324 | 2 | 2 | 0.0000578001 |
| Sorghum bicolor | Chr09 | 4 | CH_sbi_124 | 3 | 5 | 0.0000000516279 |
| Secale cereale | GWHASIY00000001 | 4 | CH_sce_134 | 4 | 20 | 0.00000000137136 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_1098 | 2 | 3 | 0.000146142 |
| Setaria italica | scaffold_3 | 4 | CH_sit_132 | 4 | 20 | 0.000000014201 |
| Saccharum spontaneum | Chr7B | 4 | CH_ssp_13 | 7 | 17 | 9.31948e-20 |
| Setaria viridis | Chr_03 | 4 | CH_svi_118 | 4 | 20 | 0.0000000103173 |
| Triticum aestivum | Chr1D | 4 | CH_tae_445 | 4 | 17 | 0.0000000154121 |
| Triticum aestivum | Chr1B | 4 | CH_tae_517 | 3 | 3 | 0.0000000866104 |
| Triticum aestivum | Chr1A | 4 | CH_tae_990 | 3 | 16 | 0.0000484606 |
| Triticum dicoccoides | 1B | 4 | CH_tdi_389 | 3 | 29 | 0.0000482528 |
| Triticum turgidum | chr1B | 4 | CH_ttu_229 | 3 | 3 | 0.0000000512815 |
| Triticum turgidum | chr1A | 4 | CH_ttu_450 | 3 | 17 | 0.0000348409 |
| Vanilla planifolia | CM028152.1 | 4 | CH_vpl_257 | 2 | 2 | 0.000221664 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |