Functional clusters
Information
- Type Gene Ontology
- Description hexose metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd5 | 3 | CH_bdi_257 | 4 | 15 | 0.000299538 |
| Chara braunii | BFEA01000023 | 3 | CH_cbr_81 | 7 | 63 | 0.0000200636 |
| Cenchrus purpureus | GWHAORA00000005 | 3 | CH_cpu_300 | 5 | 8 | 0.000000109274 |
| Digitaria exilis | Dexi_CM05836_chr07A | 3 | CH_dex_86 | 7 | 11 | 0.00000000000286801 |
| Hordeum vulgare | chr2H | 3 | CH_hvu_88 | 6 | 15 | 0.000000000554 |
| Lolium perenne | Lp_chr2_0 | 3 | CH_lpe_80 | 6 | 20 | 0.00000000164368 |
| Miscanthus sinensis | Chr12 | 3 | CH_msi_214 | 5 | 11 | 0.00000109722 |
| Miscanthus sinensis | Chr11 | 3 | CH_msi_257 | 5 | 14 | 0.00000473032 |
| Oropetium thomaeum | Chromosome_6 | 3 | CH_oth_97 | 4 | 9 | 0.0000338435 |
| Panicum hallii | Chr07 | 3 | CH_pha_40 | 7 | 11 | 0.000000000000263314 |
| Populus trichocarpa | Chr17 | 3 | CH_ptr_435 | 3 | 3 | 0.000396299 |
| Sorghum bicolor | Chr06 | 3 | CH_sbi_181 | 5 | 14 | 0.00000133866 |
| Sorghum bicolor | Chr04 | 3 | CH_sbi_355 | 3 | 3 | 0.000215115 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_54 | 8 | 16 | 0.0000000000000522726 |
| Setaria italica | scaffold_7 | 3 | CH_sit_55 | 7 | 10 | 0.000000000000122835 |
| Saccharum spontaneum | Chr5C | 3 | CH_ssp_199 | 5 | 6 | 0.0000000324765 |
| Setaria viridis | Chr_07 | 3 | CH_svi_47 | 7 | 10 | 0.0000000000000571601 |
| Triticum aestivum | Chr2D | 3 | CH_tae_149 | 7 | 7 | 0.00000000000000460076 |
| Triticum aestivum | Chr2A | 3 | CH_tae_168 | 8 | 14 | 0.0000000000000229268 |
| Triticum aestivum | Chr2B | 3 | CH_tae_264 | 7 | 14 | 0.0000000000156276 |
| Triticum dicoccoides | 2A | 3 | CH_tdi_202 | 5 | 10 | 0.000000214006 |
| Brachypodium distachyon | Bd5 | 4 | CH_bdi_257 | 4 | 15 | 0.000299538 |
| Chara braunii | BFEA01000023 | 4 | CH_cbr_81 | 7 | 63 | 0.0000200636 |
| Cenchrus purpureus | GWHAORA00000005 | 4 | CH_cpu_300 | 5 | 8 | 0.000000109274 |
| Digitaria exilis | Dexi_CM05836_chr07A | 4 | CH_dex_86 | 7 | 11 | 0.00000000000286801 |
| Hordeum vulgare | chr2H | 4 | CH_hvu_88 | 6 | 15 | 0.000000000554 |
| Lolium perenne | Lp_chr2_0 | 4 | CH_lpe_80 | 6 | 20 | 0.00000000164368 |
| Miscanthus sinensis | Chr12 | 4 | CH_msi_214 | 5 | 11 | 0.00000109722 |
| Miscanthus sinensis | Chr11 | 4 | CH_msi_257 | 5 | 14 | 0.00000473032 |
| Oropetium thomaeum | Chromosome_6 | 4 | CH_oth_97 | 4 | 9 | 0.0000338435 |
| Panicum hallii | Chr07 | 4 | CH_pha_40 | 7 | 11 | 0.000000000000263314 |
| Populus trichocarpa | Chr17 | 4 | CH_ptr_435 | 3 | 3 | 0.000396299 |
| Sorghum bicolor | Chr06 | 4 | CH_sbi_181 | 5 | 14 | 0.00000133866 |
| Sorghum bicolor | Chr04 | 4 | CH_sbi_355 | 3 | 3 | 0.000215115 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_54 | 8 | 16 | 0.0000000000000522726 |
| Setaria italica | scaffold_7 | 4 | CH_sit_55 | 7 | 10 | 0.000000000000122835 |
| Saccharum spontaneum | Chr5C | 4 | CH_ssp_199 | 5 | 6 | 0.0000000324765 |
| Setaria viridis | Chr_07 | 4 | CH_svi_47 | 7 | 10 | 0.0000000000000571601 |
| Triticum aestivum | Chr2D | 4 | CH_tae_149 | 7 | 7 | 0.00000000000000460076 |
| Triticum aestivum | Chr2A | 4 | CH_tae_168 | 8 | 14 | 0.0000000000000229268 |
| Triticum aestivum | Chr2B | 4 | CH_tae_264 | 7 | 14 | 0.0000000000156276 |
| Triticum dicoccoides | 2A | 4 | CH_tdi_202 | 5 | 10 | 0.000000214006 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0006000 | fructose metabolic process | 2 |
| GO:0006004 | fucose metabolic process | 2 |
| GO:0006005 | L-fucose biosynthetic process | 36 |
| GO:0006006 | glucose metabolic process | 6 |
| GO:0006007 | glucose catabolic process | 14 |
| GO:0006013 | mannose metabolic process | 44 |
| GO:0006094 | gluconeogenesis | 2 |
| GO:0010906 | regulation of glucose metabolic process | 16 |
| GO:0033499 | galactose catabolic process via UDP-galactose | 2 |
| GO:0042353 | fucose biosynthetic process | 8 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |