Functional clusters
Information
- Type Gene Ontology
- Description mannose metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd4 | 3 | CH_bdi_85 | 3 | 3 | 0.0000000570449 |
| Calamus simplicifolius | scaffold59 | 3 | CH_calsi_14 | 5 | 6 | 0.0000000000000511868 |
| Ceratophyllum demersum | 5 | 3 | CH_cde_191 | 2 | 2 | 0.000473878 |
| Digitaria exilis | Dexi_CM05836_chr09B | 3 | CH_dex_114 | 4 | 4 | 0.000000000036956 |
| Digitaria exilis | Dexi_CM05836_chr09A | 3 | CH_dex_252 | 3 | 3 | 0.00000027644 |
| Magnolia biondii | Chr12 | 3 | CH_mbi_414 | 3 | 12 | 0.0000435439 |
| Miscanthus sinensis | Chr01 | 3 | CH_msi_102 | 4 | 5 | 0.0000000011916 |
| Miscanthus sinensis | Chr02 | 3 | CH_msi_17 | 7 | 8 | 1.36551e-20 |
| Oryza alta | GWHAZTO00000006 | 3 | CH_oal_796 | 2 | 2 | 0.00090681 |
| Oryza alta | GWHAZTO00000018 | 3 | CH_oal_797 | 2 | 2 | 0.00090681 |
| Prasinoderma coloniale | Chr3 | 3 | CH_pco_16 | 2 | 2 | 0.000837404 |
| Phyllostachys edulis | hic_scaffold_13 | 3 | CH_ped_148 | 3 | 3 | 0.00000013946 |
| Phyllostachys edulis | hic_scaffold_13 | 3 | CH_ped_201 | 3 | 5 | 0.00000139433 |
| Sorghum bicolor | Chr01 | 3 | CH_sbi_54 | 4 | 4 | 0.00000000000908782 |
| Sequoiadendron giganteum | chr5 | 3 | CH_sgi_115 | 9 | 24 | 5.41446e-21 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_218 | 6 | 9 | 0.0000000000000140599 |
| Setaria italica | scaffold_9 | 3 | CH_sit_399 | 2 | 2 | 0.00034826 |
| Saccharum spontaneum | Chr1A | 3 | CH_ssp_202 | 4 | 9 | 0.0000000375212 |
| Saccharum spontaneum | Chr1C | 3 | CH_ssp_330 | 3 | 3 | 0.00000131498 |
| Triticum dicoccoides | 1B | 3 | CH_tdi_626 | 2 | 2 | 0.000831181 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00076.1 | 3 | CH_zjn_257 | 2 | 3 | 0.000666144 |
| Zea mays B73 | 1 | 3 | CH_zma_177 | 3 | 8 | 0.0000263329 |
| Brachypodium distachyon | Bd4 | 4 | CH_bdi_85 | 3 | 3 | 0.0000000570449 |
| Calamus simplicifolius | scaffold59 | 4 | CH_calsi_14 | 5 | 6 | 0.0000000000000511868 |
| Ceratophyllum demersum | 5 | 4 | CH_cde_191 | 2 | 2 | 0.000473878 |
| Digitaria exilis | Dexi_CM05836_chr09B | 4 | CH_dex_114 | 4 | 4 | 0.000000000036956 |
| Digitaria exilis | Dexi_CM05836_chr09A | 4 | CH_dex_252 | 3 | 3 | 0.00000027644 |
| Magnolia biondii | Chr12 | 4 | CH_mbi_414 | 3 | 12 | 0.0000435439 |
| Miscanthus sinensis | Chr01 | 4 | CH_msi_102 | 4 | 5 | 0.0000000011916 |
| Miscanthus sinensis | Chr02 | 4 | CH_msi_17 | 7 | 8 | 1.36551e-20 |
| Oryza alta | GWHAZTO00000006 | 4 | CH_oal_796 | 2 | 2 | 0.00090681 |
| Oryza alta | GWHAZTO00000018 | 4 | CH_oal_797 | 2 | 2 | 0.00090681 |
| Prasinoderma coloniale | Chr3 | 4 | CH_pco_16 | 2 | 2 | 0.000837404 |
| Phyllostachys edulis | hic_scaffold_13 | 4 | CH_ped_148 | 3 | 3 | 0.00000013946 |
| Phyllostachys edulis | hic_scaffold_13 | 4 | CH_ped_201 | 3 | 5 | 0.00000139433 |
| Sorghum bicolor | Chr01 | 4 | CH_sbi_54 | 4 | 4 | 0.00000000000908782 |
| Sequoiadendron giganteum | chr5 | 4 | CH_sgi_115 | 9 | 24 | 5.41446e-21 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_218 | 6 | 9 | 0.0000000000000140599 |
| Setaria italica | scaffold_9 | 4 | CH_sit_399 | 2 | 2 | 0.00034826 |
| Saccharum spontaneum | Chr1A | 4 | CH_ssp_202 | 4 | 9 | 0.0000000375212 |
| Saccharum spontaneum | Chr1C | 4 | CH_ssp_330 | 3 | 3 | 0.00000131498 |
| Triticum dicoccoides | 1B | 4 | CH_tdi_626 | 2 | 2 | 0.000831181 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00076.1 | 4 | CH_zjn_257 | 2 | 3 | 0.000666144 |
| Zea mays B73 | 1 | 4 | CH_zma_177 | 3 | 8 | 0.0000263329 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |