Functional clusters

Information

  • Type Gene Ontology
  • Description L-fucose biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000012 3 CH_cpu_732 2 2 0.000185483
Cenchrus purpureus GWHAORA00000006 3 CH_cpu_876 2 3 0.000556429
Digitaria exilis Dexi_CM05836_chr04B 3 CH_dex_520 2 2 0.000200521
Digitaria exilis Dexi_CM05836_chr04A 3 CH_dex_521 2 2 0.000200521
Oryza alta GWHAZTO00000018 3 CH_oal_523 2 2 0.000120908
Oryza alta GWHAZTO00000006 3 CH_oal_741 2 4 0.000725414
Oryza sativa ssp. indica Chr6 3 CH_osaindica_252 2 2 0.0000516609
Oryza sativa Kitaake Chr6 3 CH_osak_285 2 2 0.0000562857
Oryza sativa ssp. japonica chr06 3 CH_osa_273 2 2 0.0000528123
Oropetium thomaeum Chromosome_2 3 CH_oth_153 2 3 0.000213546
Phyllostachys edulis hic_scaffold_8 3 CH_ped_385 2 2 0.000244474
Panicum hallii Chr04 3 CH_pha_247 2 2 0.0000581108
Sorghum bicolor Chr10 3 CH_sbi_260 2 2 0.0000586682
Setaria italica scaffold_4 3 CH_sit_284 2 2 0.0000580434
Saccharum spontaneum Chr8B 3 CH_ssp_855 2 2 0.000357884
Saccharum spontaneum Chr8D 3 CH_ssp_856 2 2 0.000357884
Setaria viridis Chr_04 3 CH_svi_295 2 2 0.0000521785
Zoysia japonica ssp. nagirizaki Zjn_sc00008.1 3 CH_zjn_151 2 2 0.000111029
Cenchrus purpureus GWHAORA00000012 4 CH_cpu_732 2 2 0.000185483
Cenchrus purpureus GWHAORA00000006 4 CH_cpu_876 2 3 0.000556429
Digitaria exilis Dexi_CM05836_chr04B 4 CH_dex_520 2 2 0.000200521
Digitaria exilis Dexi_CM05836_chr04A 4 CH_dex_521 2 2 0.000200521
Oryza alta GWHAZTO00000018 4 CH_oal_523 2 2 0.000120908
Oryza alta GWHAZTO00000006 4 CH_oal_741 2 4 0.000725414
Oryza sativa ssp. indica Chr6 4 CH_osaindica_252 2 2 0.0000516609
Oryza sativa Kitaake Chr6 4 CH_osak_285 2 2 0.0000562857
Oryza sativa ssp. japonica chr06 4 CH_osa_273 2 2 0.0000528123
Oropetium thomaeum Chromosome_2 4 CH_oth_153 2 3 0.000213546
Phyllostachys edulis hic_scaffold_8 4 CH_ped_385 2 2 0.000244474
Panicum hallii Chr04 4 CH_pha_247 2 2 0.0000581108
Sorghum bicolor Chr10 4 CH_sbi_260 2 2 0.0000586682
Setaria italica scaffold_4 4 CH_sit_284 2 2 0.0000580434
Saccharum spontaneum Chr8B 4 CH_ssp_855 2 2 0.000357884
Saccharum spontaneum Chr8D 4 CH_ssp_856 2 2 0.000357884
Setaria viridis Chr_04 4 CH_svi_295 2 2 0.0000521785
Zoysia japonica ssp. nagirizaki Zjn_sc00008.1 4 CH_zjn_151 2 2 0.000111029

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001