Functional clusters

Information

  • Type Gene Ontology
  • Description plastid envelope

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aegilops tauschii 2D 3 CH_ata_416 6 9 0.000928641
Setaria italica scaffold_14 3 CH_sit_15 30 75 2.96557e-23
Saccharum spontaneum Chr2D 3 CH_ssp_442 12 34 0.00000846834
Aegilops tauschii 2D 4 CH_ata_416 6 9 0.000928641
Setaria italica scaffold_14 4 CH_sit_15 30 75 2.96557e-23
Saccharum spontaneum Chr2D 4 CH_ssp_442 12 34 0.00000846834

Available child term results

Ontology identifier Description Number of clusters
GO:0009503 thylakoid light-harvesting complex 4
GO:0009517 PSII associated light-harvesting complex II 2
GO:0009535 chloroplast thylakoid membrane 6
GO:0009544 chloroplast ATP synthase complex 4
GO:0009706 chloroplast inner membrane 6
GO:0009941 chloroplast envelope 10
GO:0010006 Toc complex 2
GO:0030093 chloroplast photosystem I 4
GO:0031357 integral component of chloroplast inner membrane 8
GO:0031897 Tic complex 14
GO:0035451 extrinsic component of stromal side of plastid thylakoid membrane 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001