Functional clusters
Information
- Type Gene Ontology
- Description chloroplast envelope
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Digitaria exilis | Dexi_CM05836_chr01B | 3 | CH_dex_707 | 5 | 6 | 0.000779687 |
| Eragrostis curvula | Contig50 | 3 | CH_ecu_790 | 10 | 53 | 0.00049958 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_1287 | 10 | 52 | 0.000533295 |
| Saccharum spontaneum | Chr2A | 3 | CH_ssp_882 | 5 | 5 | 0.000367034 |
| Vanilla planifolia | CM028150.1 | 3 | CH_vpl_95 | 7 | 8 | 0.00000074287 |
| Digitaria exilis | Dexi_CM05836_chr01B | 4 | CH_dex_707 | 5 | 6 | 0.000779687 |
| Eragrostis curvula | Contig50 | 4 | CH_ecu_790 | 10 | 53 | 0.00049958 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_1287 | 10 | 52 | 0.000533295 |
| Saccharum spontaneum | Chr2A | 4 | CH_ssp_882 | 5 | 5 | 0.000367034 |
| Vanilla planifolia | CM028150.1 | 4 | CH_vpl_95 | 7 | 8 | 0.00000074287 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009706 | chloroplast inner membrane | 6 |
| GO:0010006 | Toc complex | 2 |
| GO:0031357 | integral component of chloroplast inner membrane | 8 |
| GO:0031897 | Tic complex | 14 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |