Functional clusters
Information
- Type Gene Ontology
- Description Tic complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brachypodium distachyon | Bd3 | 3 | CH_bdi_277 | 2 | 2 | 0.000370005 |
| Hordeum vulgare | chr1H | 3 | CH_hvu_443 | 2 | 3 | 0.00073047 |
| Secale cereale | GWHASIY00000001 | 3 | CH_sce_720 | 2 | 2 | 0.00045529 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_1216 | 2 | 2 | 0.000292291 |
| Triticum aestivum | Chr1A | 3 | CH_tae_1371 | 2 | 2 | 0.000673438 |
| Triticum aestivum | Chr1B | 3 | CH_tae_1372 | 2 | 2 | 0.000673438 |
| Triticum turgidum | chr1B | 3 | CH_ttu_645 | 2 | 2 | 0.000468801 |
| Brachypodium distachyon | Bd3 | 4 | CH_bdi_277 | 2 | 2 | 0.000370005 |
| Hordeum vulgare | chr1H | 4 | CH_hvu_443 | 2 | 3 | 0.00073047 |
| Secale cereale | GWHASIY00000001 | 4 | CH_sce_720 | 2 | 2 | 0.00045529 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_1216 | 2 | 2 | 0.000292291 |
| Triticum aestivum | Chr1A | 4 | CH_tae_1371 | 2 | 2 | 0.000673438 |
| Triticum aestivum | Chr1B | 4 | CH_tae_1372 | 2 | 2 | 0.000673438 |
| Triticum turgidum | chr1B | 4 | CH_ttu_645 | 2 | 2 | 0.000468801 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |