Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.auxin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_396 4 19 0.00057241
Arabidopsis thaliana Chr1 2 CH_ath_396 4 19 0.00057241

Available child term results

Ontology identifier Description Number of clusters
11.2.1 Phytohormone action.auxin.biosynthesis 2
11.2.1.1 Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway 4
11.2.1.1.1 Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase 20
11.2.1.1.2 Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.flavin-dependent monooxygenase (YUCCA) 70
11.2.1.2.1 Phytohormone action.auxin.biosynthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase 12
11.2.2.1 Phytohormone action.auxin.perception and signal transduction.substrate adaptor of SCF ubiquitin ligase (TIR1/AFB) 4
11.2.2.2 Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX) 16
11.2.3.1 Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid-amido synthetase 2
11.2.3.2 Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid carboxyl methyltransferase (MES17) 32
11.2.3.3 Phytohormone action.auxin.conjugation and degradation.SAM dependent carboxyl methyltransferase (IAMT1) 12
11.2.3.4 Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid dioxygenase 24
11.2.4.1.1 Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN) 28
11.2.4.1.2 Phytohormone action.auxin.transport.polar auxin transport.regulatory kinase (PINOID) 2
11.2.4.1.3 Phytohormone action.auxin.transport.polar auxin transport.regulatory protein (BIG) 8
11.2.4.3 Phytohormone action.auxin.transport.auxin efflux transporter (ABCB19) 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001