Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.auxin.biosynthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000009 1 CH_cpu_617 2 2 0.0000927414
Oryza alta GWHAZTO00000004 1 CH_oal_372 2 2 0.000060454
Oryza brachyantha 4 1 CH_obr_165 2 2 0.0000597336
Oryza sativa Kitaake Chr4 1 CH_osak_292 2 2 0.0000562857
Oryza sativa ssp. japonica chr04 1 CH_osa_201 2 2 0.0000528123
Setaria viridis Chr_05 1 CH_svi_261 2 2 0.0000521785
Cenchrus purpureus GWHAORA00000009 2 CH_cpu_617 2 2 0.0000927414
Oryza alta GWHAZTO00000004 2 CH_oal_372 2 2 0.000060454
Oryza brachyantha 4 2 CH_obr_165 2 2 0.0000597336
Oryza sativa Kitaake Chr4 2 CH_osak_292 2 2 0.0000562857
Oryza sativa ssp. japonica chr04 2 CH_osa_201 2 2 0.0000528123
Setaria viridis Chr_05 2 CH_svi_261 2 2 0.0000521785

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001