Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr7_1 1 CH_asa_140 3 3 0.00000000901126
Digitaria exilis Dexi_CM05836_chr03A 1 CH_dex_612 2 2 0.000501303
Digitaria exilis Dexi_CM05836_chr03B 1 CH_dex_613 2 2 0.000501303
Eragrostis curvula 7 1 CH_ecu_321 4 61 0.000000455378
Lolium perenne Lp_chr1_0 1 CH_lpe_265 2 3 0.0000964258
Oropetium thomaeum Chromosome_5 1 CH_oth_232 2 2 0.000427107
Panicum hallii Chr03 1 CH_pha_296 2 2 0.000174332
Sorghum bicolor Chr09 1 CH_sbi_333 2 2 0.000176005
Setaria italica scaffold_3 1 CH_sit_392 2 2 0.00034826
Setaria viridis Chr_03 1 CH_svi_348 2 2 0.000156535
Allium sativum chr7_1 2 CH_asa_140 3 3 0.00000000901126
Digitaria exilis Dexi_CM05836_chr03A 2 CH_dex_612 2 2 0.000501303
Digitaria exilis Dexi_CM05836_chr03B 2 CH_dex_613 2 2 0.000501303
Eragrostis curvula 7 2 CH_ecu_321 4 61 0.000000455378
Lolium perenne Lp_chr1_0 2 CH_lpe_265 2 3 0.0000964258
Oropetium thomaeum Chromosome_5 2 CH_oth_232 2 2 0.000427107
Panicum hallii Chr03 2 CH_pha_296 2 2 0.000174332
Sorghum bicolor Chr09 2 CH_sbi_333 2 2 0.000176005
Setaria italica scaffold_3 2 CH_sit_392 2 2 0.00034826
Setaria viridis Chr_03 2 CH_svi_348 2 2 0.000156535

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001