Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p12190 Brassica napus
A06p47580 Brassica napus
A10p02940 Brassica napus
Aa31LG1G20350 Aethionema arabicum
Aa31LG5G3290 Aethionema arabicum
Aa31LG5G3980 Aethionema arabicum
Actinidia11372 Actinidia chinensis
Actinidia37547 Actinidia chinensis
Actinidia39929 Actinidia chinensis
Ah.04g155200 Amaranthus hybridus
AL1G14170 Arabidopsis lyrata
AL3G14360 Arabidopsis lyrata
AL4G28980 Arabidopsis lyrata
AL8G16130 Arabidopsis lyrata
Aqoxy2G03745 Aquilegia oxysepala
Aqoxy5G00149 Aquilegia oxysepala
Aqoxy7G02466 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.05JFC4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.39CT4P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.39ZWNP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3SR464 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ERW5M8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MKT5JH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SRNN6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5QG8Q Arachis hypogaea
AT1G04520 Arabidopsis thaliana
AT2G33330 Arabidopsis thaliana
AT3G04370 Arabidopsis thaliana
AT5G43980 Arabidopsis thaliana
ATR0174G001 Amborella trichopoda
Atru.chr2.1056 Acer truncatum
Atru.chr2.1057 Acer truncatum
Atru.chr4.1918 Acer truncatum
Atru.chr5.1828 Acer truncatum
AUR62000626 Chenopodium quinoa
AUR62006979 Chenopodium quinoa
AUR62008789 Chenopodium quinoa
AUR62016167 Chenopodium quinoa
AUR62035083 Chenopodium quinoa
BcaC02g11418 Brassica carinata
BcaC05g29946 Brassica carinata
BcaC06g31666 Brassica carinata
BcaC06g34607 Brassica carinata
BolC4t23146H Brassica oleracea
BolC5t29050H Brassica oleracea
BolC5t34937H Brassica oleracea
BolC7t43181H Brassica oleracea
BraA05t20163Z Brassica rapa
BraA06t27626Z Brassica rapa
BraA10t42563Z Brassica rapa
C04p15760 Brassica napus
C05p02690 Brassica napus
C07p26540 Brassica napus
CAN.G220.70 Capsicum annuum
CAN.G2204.5 Capsicum annuum
CAN.G638.42 Capsicum annuum
CAN.G694.48 Capsicum annuum
CAN.G771.40 Capsicum annuum
CANSAT01G1681 Cannabis sativa
CANSAT54G1014 Cannabis sativa
CANSAT78G0277 Cannabis sativa
CARHR003860 Cardamine hirsuta
CARHR078550 Cardamine hirsuta
CARHR127330 Cardamine hirsuta
CARHR179380 Cardamine hirsuta
Carub.0001s0373 Capsella rubella
Carub.0003s0358 Capsella rubella
Carub.0004s1495 Capsella rubella
Carub.0008s0457 Capsella rubella
Ca_08728_v3 Cicer arietinum L.
Ca_08737_v3 Cicer arietinum L.
Ca_09802_v3 Cicer arietinum L.
Cc01_g17850 Coffea canephora
Cc03_g06270 Coffea canephora
Cc09_g02880 Coffea canephora
CDE05G0784 Ceratophyllum demersum
CDE05G1431 Ceratophyllum demersum
CDE05G2194 Ceratophyllum demersum
CDE11G0442 Ceratophyllum demersum
Cfa002478 Carpinus fangiana
Cfa006375 Carpinus fangiana
Ciclev10005547m.g Citrus clementina
Ciclev10021437m.g Citrus clementina
Ciclev10033575m.g Citrus clementina
CiPaw.01G178200 Carya illinoinensis
CiPaw.02G107200 Carya illinoinensis
CiPaw.03G270200 Carya illinoinensis
CiPaw.04G190200 Carya illinoinensis
CiPaw.07G071500 Carya illinoinensis
ClCG05G004010 Citrullus lanatus
ClCG06G007270 Citrullus lanatus
ClCG07G001380 Citrullus lanatus
ClCG11G010420 Citrullus lanatus
COL.COLO4_10575 Corchorus olitorius
COL.COLO4_15516 Corchorus olitorius
COL.COLO4_15961 Corchorus olitorius
Cpa.g.sc44.2 Carica papaya
Cpa.g.sc717.1 Carica papaya
Cpa.g.sc87.21 Carica papaya
CsaV3_2G009940 Cucumis sativus L.
CsaV3_2G012430 Cucumis sativus L.
CsaV3_3G011720 Cucumis sativus L.
CsaV3_3G028350 Cucumis sativus L.
CSS0018833 Camellia sinensis var. sinensis
CSS0032014 Camellia sinensis var. sinensis
CSS0032328 Camellia sinensis var. sinensis
CSS0032886 Camellia sinensis var. sinensis
CSS0045990 Camellia sinensis var. sinensis
DCAR_018516 Daucus carota
DCAR_024292 Daucus carota
DCAR_027348 Daucus carota
Dinv05278 Davidia involucrata
Dinv27111 Davidia involucrata
Dinv29804 Davidia involucrata
Duzib052G1064 Durio zibethinus
Duzib128G1592 Durio zibethinus
Duzib138G1221 Durio zibethinus
Duzib151G0844 Durio zibethinus
Duzib212G0872 Durio zibethinus
ECA232G3830 Erigeron canadensis
ECA233G4200 Erigeron canadensis
ECA236G2340 Erigeron canadensis
ECA236G4140 Erigeron canadensis
ECA247G3273 Erigeron canadensis
EL10Ac3g04945 Beta vulgaris
EL10Ac4g09750 Beta vulgaris
EL10Ac7g17678 Beta vulgaris
EL10Ac7g17679 Beta vulgaris
EL10Ac8g20290 Beta vulgaris
Eucgr.H00130 Eucalyptus grandis
Eucgr.H04220 Eucalyptus grandis
Eucgr.K01431 Eucalyptus grandis
FAN05G4269 Fragaria x ananassa
FAN09G4541 Fragaria x ananassa
FAN12G3666 Fragaria x ananassa
FAN14G2094 Fragaria x ananassa
FAN14G2266 Fragaria x ananassa
FAN15G0740 Fragaria x ananassa
FAN17G1294 Fragaria x ananassa
FAN20G0343 Fragaria x ananassa
FAN20G0420 Fragaria x ananassa
FAN20G1101 Fragaria x ananassa
FAN22G1664 Fragaria x ananassa
FAN24G1463 Fragaria x ananassa
FAN27G1004 Fragaria x ananassa
FAN27G1514 Fragaria x ananassa
FvH4_2g20590 Fragaria vesca
FvH4_2g40340 Fragaria vesca
FvH4_2g40360 Fragaria vesca
FvH4_4g04620 Fragaria vesca
FvH4_6g01600 Fragaria vesca
Glyma.03G166900 Glycine max
Glyma.10G133900 Glycine max
Glyma.10G165400 Glycine max
Glyma.10G190500 Glycine max
Glyma.13G126700 Glycine max
Glyma.19G168000 Glycine max
Glyma.20G083000 Glycine max
Glyma.20G200200 Glycine max
Glyma.20G227400 Glycine max
Gohir.A07G151700 Gossypium hirsutum
Gohir.A07G204100 Gossypium hirsutum
Gohir.A09G227400 Gossypium hirsutum
Gohir.A10G107900 Gossypium hirsutum
Gohir.A11G245700 Gossypium hirsutum
Gohir.D07G158000 Gossypium hirsutum
Gohir.D07G210100 Gossypium hirsutum
Gohir.D09G228400 Gossypium hirsutum
Gohir.D10G158566 Gossypium hirsutum
Gohir.D11G256000 Gossypium hirsutum
Gorai.001G181200 Gossypium raimondii
Gorai.001G237500 Gossypium raimondii
Gorai.006G251100 Gossypium raimondii
Gorai.007G274300 Gossypium raimondii
Gorai.011G178200 Gossypium raimondii
GSVIVG01027913001 Vitis vinifera
GSVIVG01028413001 Vitis vinifera
HanXRQChr02g0059281 Helianthus annuus
HanXRQChr03g0081921 Helianthus annuus
HanXRQChr04g0108591 Helianthus annuus
HanXRQChr05g0144931 Helianthus annuus
HanXRQChr10g0280651 Helianthus annuus
HanXRQChr14g0434781 Helianthus annuus
HanXRQChr15g0468231 Helianthus annuus
Haze_04404 Corylus avellana
Haze_11456 Corylus avellana
Haze_24696 Corylus avellana
Hma1.2p1_2139F.1_g314965 Hydrangea macrophylla
Hma1.2p1_2511F.1_g323630 Hydrangea macrophylla
Hma1.2p1_2783F.1_g328400 Hydrangea macrophylla
HPP92_005113 Vanilla planifolia
Hund05482 Selenicereus undatus
Hund07181 Selenicereus undatus
Hund11938 Selenicereus undatus
Lalb_Chr01g0019521 Lupinus albus
Lalb_Chr01g0020311 Lupinus albus
Lalb_Chr02g0149021 Lupinus albus
Lalb_Chr02g0150701 Lupinus albus
Lalb_Chr02g0152711 Lupinus albus
Lalb_Chr21g0312511 Lupinus albus
Lj1g0023406 Lotus japonicus
Lj2A1143T50 Lonicera japonica
Lj2C44G24 Lonicera japonica
Lj3C648T4 Lonicera japonica
Lj5g0002147 Lotus japonicus
Lj5g0018540 Lotus japonicus
Lj5g0027639 Lotus japonicus
Lj6C622T2 Lonicera japonica
Lsat_1_v5_gn_0_520 Lactuca sativa
Lsat_1_v5_gn_2_41401 Lactuca sativa
Lsat_1_v5_gn_6_66060 Lactuca sativa
Lsat_1_v5_gn_8_92061 Lactuca sativa
Lsat_1_v5_gn_9_11440 Lactuca sativa
Manes.03G159200 Manihot esculenta
Manes.08G140500 Manihot esculenta
Manes.13G040200 Manihot esculenta
Manes.15G045600 Manihot esculenta
MBI07_g35378_MAGBIO Magnolia biondii
MBI10_g44684_MAGBIO Magnolia biondii
MBI10_g46794_MAGBIO Magnolia biondii
MD00G1060400 Malus domestica
MD00G1149100 Malus domestica
MD04G1232100 Malus domestica
MD13G1221600 Malus domestica
MD16G1226300 Malus domestica
Medtr1g044560 Medicago truncatula
Medtr1g044580 Medicago truncatula
Medtr1g073320 Medicago truncatula
Medtr1g080350 Medicago truncatula
Medtr7g098410 Medicago truncatula
MELO3C006379.2 Cucumis melo
MELO3C008646.2 Cucumis melo
MELO3C012843.2 Cucumis melo
MELO3C023043.2 Cucumis melo
Migut.D00471 Erythranthe guttata
Migut.F02038 Erythranthe guttata
Migut.G00549 Erythranthe guttata
Migut.N00299 Erythranthe guttata
Migut.N02228 Erythranthe guttata
MSTRG.12518 Avicennia marina
MSTRG.17524 Avicennia marina
MSTRG.21463 Avicennia marina
MSTRG.24661 Avicennia marina
MSTRG.27438 Avicennia marina
Nitab4.5_0000194g0250 Nicotiana tabacum
Nitab4.5_0000476g0240 Nicotiana tabacum
Nitab4.5_0000845g0120 Nicotiana tabacum
Nitab4.5_0002210g0010 Nicotiana tabacum
Nitab4.5_0002538g0060 Nicotiana tabacum
Nitab4.5_0002751g0040 Nicotiana tabacum
Nitab4.5_0003167g0120 Nicotiana tabacum
Nitab4.5_0005647g0010 Nicotiana tabacum
Nitab4.5_0006629g0010 Nicotiana tabacum
Nitab4.5_0007231g0010 Nicotiana tabacum
Nn1g02955 Nelumbo nucifera
Oeu001250.1 Olea europaea
Oeu008317.1 Olea europaea
Oeu011223.1 Olea europaea
Oeu019868.1 Olea europaea
Oeu037693.1 Olea europaea
Oeu060516.1 Olea europaea
Os03g0140500 Oryza sativa ssp. japonica
Peaxi162Scf00043g00296 Petunia axillaris
Peaxi162Scf00153g01843 Petunia axillaris
Peaxi162Scf00156g00923 Petunia axillaris
Peaxi162Scf00319g00067 Petunia axillaris
Peaxi162Scf00517g00028 Petunia axillaris
PGR031G0393 Punica granatum
PGR044G1392 Punica granatum
PGR147G0003 Punica granatum
PGSC0003DMG400013408 Solanum tuberosum
PGSC0003DMG400017195 Solanum tuberosum
PGSC0003DMG400020078 Solanum tuberosum
Phvul.001G164400 Phaseolus vulgaris
Phvul.007G117000 Phaseolus vulgaris
Phvul.007G189600 Phaseolus vulgaris
Phvul.007G231300 Phaseolus vulgaris
Phvul.L001744 Phaseolus vulgaris
Potri.002G257300 Populus trichocarpa
Potri.008G171700 Populus trichocarpa
Potri.010G065800 Populus trichocarpa
Potri.013G048200 Populus trichocarpa
Prupe.1G048300 Prunus persica
Prupe.6G351500 Prunus persica
Prupe.8G216200 Prunus persica
Psat3g054640 Pisum sativum
Psat3g054680 Pisum sativum
Psat6g107400 Pisum sativum
Psat6g131440 Pisum sativum
Psat6g143880 Pisum sativum
PSO017G6045 Papaver somniferum
PSO063G4308 Papaver somniferum
PSO135G0843 Papaver somniferum
PSO384G2659 Papaver somniferum
QL03p029680 Quercus lobata
QL06p020977 Quercus lobata
QL09p041261 Quercus lobata
RcHm_v2.0_Chr1g0328161 Rosa chinensis
RcHm_v2.0_Chr1g0372961 Rosa chinensis
RcHm_v2.0_Chr3g0449411 Rosa chinensis
RcHm_v2.0_Chr4g0395391 Rosa chinensis
RcHm_v2.0_Chr6g0286761 Rosa chinensis
RcHm_v2.0_Chr6g0300411 Rosa chinensis
Rhsim02G0043600 Rhododendron simsii
Rhsim04G0172500 Rhododendron simsii
Rhsim05G0171200 Rhododendron simsii
Rhsim13G0039800 Rhododendron simsii
Sabra02G0195700 Salix brachista
Sabra10G0041400 Salix brachista
Sabra13G0044200 Salix brachista
SalBow1G7157 Salvia bowleyana
SalBow3G1844 Salvia bowleyana
SalBow3G2555 Salvia bowleyana
SalBow6G2336 Salvia bowleyana
SalBow6G4180 Salvia bowleyana
Sc09g0001900 Simmondsia chinensis
Sc13g0006210 Simmondsia chinensis
Sc17g0002840 Simmondsia chinensis
Sc19g0003350 Simmondsia chinensis
Sed0010613 Sechium edule
Sed0011206 Sechium edule
Sed0011633 Sechium edule
Sed0013231 Sechium edule
Sed0015357 Sechium edule
Sed0017841 Sechium edule
SGA_v2.0_scaffold1G00648 Striga asiatica
SGA_v2.0_scaffold31G12630 Striga asiatica
SGA_v2.0_scaffold344G49476 Striga asiatica
SGA_v2.0_scaffold42G16177 Striga asiatica
Solyc03g005690.3 Solanum lycopersicum
Solyc05g055930.2 Solanum lycopersicum
Solyc06g083750.3 Solanum lycopersicum
Solyc09g090680.3 Solanum lycopersicum
Sopen03g001700 Solanum pennellii
Sopen05g034330 Solanum pennellii
Sopen06g035160 Solanum pennellii
Sopen09g033620 Solanum pennellii
Sp1g03350 Schrenkiella parvula
Sp2g08810 Schrenkiella parvula
Sp3g03270 Schrenkiella parvula
Sp4g15640 Schrenkiella parvula
TAR362G0049 Trochodendron aralioides
TAR365G0828 Trochodendron aralioides
TAR633G0807 Trochodendron aralioides
TAR636G2355 Trochodendron aralioides
THA.LOC104801065 Tarenaya hassleriana
THA.LOC104801124 Tarenaya hassleriana
THA.LOC104816007 Tarenaya hassleriana
THA.LOC104820764 Tarenaya hassleriana
Thecc.01G251300 Theobroma cacao
Thecc.04G263600 Theobroma cacao
Thecc.05G268000 Theobroma cacao
Thhalv10003249m.g Eutrema salsugineum
Thhalv10008311m.g Eutrema salsugineum
Thhalv10017042m.g Eutrema salsugineum
Thhalv10022119m.g Eutrema salsugineum
TPR.G23978 Trifolium pratense
TPR.G26611 Trifolium pratense
TPR.G28842 Trifolium pratense
TPR.G31886 Trifolium pratense
TPR.G32088 Trifolium pratense
TPR.G7231 Trifolium pratense
TWI12G0560 Tripterygium wilfordii
TWI53G1215 Tripterygium wilfordii
TWI60G0398 Tripterygium wilfordii
TWI73G0789 Tripterygium wilfordii
unitig_749.g13732 Utricularia gibba
vmacro02708 Vaccinium macrocarpon
vmacro08553 Vaccinium macrocarpon
vmacro15477 Vaccinium macrocarpon
vmacro19983 Vaccinium macrocarpon
VMungo0251G1508 Vigna mungo
VMungo0720G1178 Vigna mungo
VMungo0720G1893 Vigna mungo
VMungo0720G2552 Vigna mungo
VMungo0720G2726 Vigna mungo
VMungo1383G1221 Vigna mungo
Acer truncatum (4 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (3 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (3 genes)
Arabidopsis lyrata (4 genes)
Arabidopsis thaliana (4 genes)
Arachis hypogaea (8 genes)
Avicennia marina (5 genes)
Beta vulgaris (5 genes)
Brassica carinata (4 genes)
Brassica napus (6 genes)
Brassica oleracea (4 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (3 genes)
Capsella rubella (4 genes)
Capsicum annuum (5 genes)
Cardamine hirsuta (4 genes)
Carica papaya (3 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (5 genes)
Ceratophyllum demersum (4 genes)
Chara braunii (0 genes)
Chenopodium quinoa (5 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (4 genes)
Citrus clementina (3 genes)
Coffea canephora (3 genes)
Corchorus olitorius (3 genes)
Corylus avellana (3 genes)
Cucumis melo (4 genes)
Cucumis sativus L. (4 genes)
Daucus carota (3 genes)
Davidia involucrata (3 genes)
Durio zibethinus (5 genes)
Erigeron canadensis (5 genes)
Erythranthe guttata (5 genes)
Eucalyptus grandis (3 genes)
Eutrema salsugineum (4 genes)
Fragaria vesca (5 genes)
Fragaria x ananassa (14 genes)
Glycine max (9 genes)
Gossypium hirsutum (10 genes)
Gossypium raimondii (5 genes)
Helianthus annuus (7 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (5 genes)
Lonicera japonica (4 genes)
Lotus japonicus (4 genes)
Lupinus albus (6 genes)
Magnolia biondii (3 genes)
Malus domestica (5 genes)
Manihot esculenta (4 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (5 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (10 genes)
Olea europaea (6 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (5 genes)
Phaseolus vulgaris (5 genes)
Physcomitrium patens (0 genes)
Pisum sativum (5 genes)
Populus trichocarpa (4 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (3 genes)
Punica granatum (3 genes)
Quercus lobata (3 genes)
Rhododendron simsii (4 genes)
Rosa chinensis (6 genes)
Salix brachista (3 genes)
Salvia bowleyana (5 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (4 genes)
Sechium edule (6 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (3 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (4 genes)
Solanum lycopersicum (4 genes)
Solanum pennellii (4 genes)
Solanum tuberosum (3 genes)
Striga asiatica (4 genes)
Tarenaya hassleriana (4 genes)
Theobroma cacao (3 genes)
Trifolium pratense (6 genes)
Tripterygium wilfordii (4 genes)
Trochodendron aralioides (4 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (4 genes)
Vanilla planifolia (1 genes)
Vigna mungo (6 genes)
Vitis vinifera (2 genes)
Zea mays (0 genes)

Program Settings