Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 0.0e+00 1288.9 651 100.0
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 0.0e+00 1273.8 651 98.8
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 3.2e-284 981.5 652 75.6
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 2.1e-283 978.8 654 75.1
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 1.1e-281 973.0 652 75.3
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 3.5e-275 951.4 652 73.5
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 2.6e-262 908.7 662 71.8
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 7.9e-251 870.5 655 67.9
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 2.2e-245 852.4 655 68.9
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 7.7e-230 800.8 561 70.8
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 4.1e-207 725.3 656 57.9
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 1.2e-206 723.8 659 58.1
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 3.4e-201 705.7 659 56.9
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 7.5e-201 704.5 659 56.6
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 5.4e-199 698.4 662 54.8
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 1.0e-197 694.1 688 53.8
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 4.7e-195 685.3 658 54.6
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 1.2e-193 680.6 658 54.3
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.7e-192 676.8 656 54.3
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 4.9e-192 675.2 638 55.0
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 1.4e-191 673.7 663 53.5
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 1.4e-191 673.7 707 54.7
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 3.9e-189 665.6 659 53.7
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 5.6e-188 661.8 668 53.1
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 4.0e-186 655.6 666 53.5
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 1.0e-181 641.0 658 51.7
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.3e-181 639.8 637 53.2
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.4e-178 630.6 662 51.5
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 1.4e-175 620.5 673 50.2
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 5.4e-175 618.6 590 54.9
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 5.2e-170 602.1 660 49.8
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 5.2e-170 602.1 660 50.3
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 8.9e-170 601.3 682 49.6
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 1.3e-168 597.4 664 48.2
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.3e-168 597.4 648 49.8
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 2.9e-168 596.3 641 50.5
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 3.8e-168 595.9 660 49.7
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 6.0e-166 588.6 664 49.1
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 6.6e-165 585.1 665 48.6
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 1.5e-164 583.9 530 57.4
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 3.6e-163 579.3 664 48.6
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 1.1e-162 577.8 671 48.7
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 5.2e-162 575.5 668 48.8
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 6.9e-162 575.1 751 44.5
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 9.0e-162 574.7 485 61.0
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 2.0e-161 573.5 666 48.3
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 1.1e-159 567.8 669 47.8
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 1.9e-159 567.0 670 48.1
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 3.2e-159 566.2 671 48.0
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 3.2e-159 566.2 669 48.0
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 5.4e-159 565.5 651 48.2
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.2e-158 564.3 663 47.2
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 2.1e-158 563.5 666 46.7
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 2.1e-158 563.5 626 50.2
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 2.7e-158 563.1 782 43.1
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 1.9e-156 557.0 660 48.0
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 8.1e-155 551.6 616 48.5
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 5.3e-154 548.9 666 45.2
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 4.5e-153 545.8 652 47.5
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 5.8e-153 545.4 666 46.7
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 2.4e-151 540.0 596 49.7
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 1.6e-150 537.3 642 46.3
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 7.9e-150 535.0 593 48.7
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 2.3e-149 533.5 667 45.9
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 2.5e-148 530.0 497 55.7
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 2.4e-143 513.5 686 44.2
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 6.0e-142 508.8 665 45.4
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 9.0e-138 495.0 686 44.8
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.9e-135 487.3 472 54.2
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 7.1e-135 485.3 598 45.7
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 5.1e-133 479.2 462 54.1
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 3.7e-131 473.0 663 44.8
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 1.8e-130 470.7 523 48.8
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 3.1e-130 469.9 423 55.3
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 2.3e-125 453.8 716 41.2
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 2.3e-125 453.8 654 42.7
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 5.3e-122 442.6 592 44.3
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 3.2e-119 433.3 696 38.2
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 1.1e-116 424.9 655 40.0
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 2.8e-115 420.2 689 39.3
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 2.4e-114 417.2 726 38.6
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 2.0e-113 414.1 706 38.1
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 4.5e-113 412.9 256 81.6
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 5.3e-106 389.4 490 43.5
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 7.2e-103 379.0 676 35.7
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 4.7e-94 349.7 800 32.0
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 1.7e-91 341.3 653 36.4
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 9.5e-87 325.5 698 32.7
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 1.2e-86 325.1 422 47.4
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 5.2e-85 319.7 392 48.7
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 1.1e-82 312.0 375 46.4
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.3e-80 305.1 437 40.0
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 3.8e-80 303.5 507 37.9
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 6.6e-80 302.8 507 37.9
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 4.9e-75 286.6 194 71.6
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 1.0e-72 278.9 516 37.6
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 1.5e-71 275.0 263 56.3
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 8.0e-70 269.2 264 55.3
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 1.4e-61 241.9 203 65.0
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 3.7e-59 233.8 491 32.2
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.0e-56 224.2 179 61.5
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 8.4e-51 206.1 174 63.2
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 5.4e-50 203.4 392 35.7
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 2.6e-44 184.5 175 54.3
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 1.2e-41 175.6 343 33.8
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 1.5e-36 158.7 263 34.2
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 4.8e-30 137.1 197 39.6
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 6.4e-27 126.7 489 27.2
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 1.0e-24 119.4 131 51.9
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 7.6e-20 103.2 515 21.9
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.1e-15 89.4 161 35.4
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 7.4e-15 86.7 94 47.9
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 3.1e-13 81.3 95 41.1
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 3.1e-13 81.3 135 43.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (0 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (0 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (3 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (0 genes)
Pisum sativum (5 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings