Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.HC0VLG Arachis hypogaea HOM05D004117 ORTHO05D004520 3.1e-134 481.9 254 100.0
arahy.Tifrunner.gnm1.ann1.A5IPPM Arachis hypogaea HOM05D004117 ORTHO05D004520 4.9e-31 139.0 74 100.0
arahy.Tifrunner.gnm1.ann1.X0GQC6 Arachis hypogaea HOM05D004117 ORTHO05D004520 4.9e-31 139.0 74 100.0
FAN14G3113 Fragaria x ananassa HOM05D004117 ORTHO05D004520 6.0e-29 132.1 83 85.5
FAN02G0254 Fragaria x ananassa HOM05D004117 ORTHO05D004520 1.3e-28 131.0 83 84.3
vmacro12419 Vaccinium macrocarpon HOM05D004117 ORTHO05D004520 2.3e-28 130.2 75 89.3
Nitab4.5_0005259g0030 Nicotiana tabacum HOM05D004117 ORTHO05D004520 3.3e-27 126.3 77 84.4
Sabra06G0216200 Salix brachista HOM05D004117 ORTHO05D004520 5.6e-27 125.6 80 85.0
MBI06_g18691_MAGBIO Magnolia biondii HOM05D004117 ORTHO05D004520 2.1e-26 123.6 75 84.0
SalBow7G1867 Salvia bowleyana HOM05D004117 ORTHO05D004520 2.8e-26 123.2 74 87.8
FAN09G0194 Fragaria x ananassa HOM05D004117 ORTHO05D004520 6.2e-26 122.1 76 86.8
Lalb_Chr15g0080421 Lupinus albus HOM05D004117 ORTHO05D004520 6.2e-26 122.1 75 90.7
RcHm_v2.0_Chr2g0131361 Rosa chinensis HOM05D004117 ORTHO05D004520 6.2e-26 122.1 76 86.8
Lj6g0002139 Lotus japonicus HOM05D004117 ORTHO05D004520 8.1e-26 121.7 68 97.1
Phvul.006G038200 Phaseolus vulgaris HOM05D004117 ORTHO05D004520 1.1e-25 121.3 76 86.8
SGA_v2.0_scaffold9G04867 Striga asiatica HOM05D004117 ORTHO05D004520 1.4e-25 120.9 74 86.5
FAN05G5128 Fragaria x ananassa HOM05D004117 ORTHO05D004520 1.8e-25 120.6 76 85.5
Glyma.18G102500 Glycine max HOM05D004117 ORTHO05D004520 1.8e-25 120.6 76 85.5
VMungo0540G1454 Vigna mungo HOM05D004117 ORTHO05D004520 1.8e-25 120.6 76 84.2
Medtr8g016090 Medicago truncatula HOM05D004117 ORTHO05D004520 3.1e-25 119.8 68 95.6
TPR.G22233 Trifolium pratense HOM05D004117 ORTHO05D004520 3.1e-25 119.8 68 95.6
ECA234G3208 Erigeron canadensis HOM05D004117 ORTHO05D004520 4.0e-25 119.4 100 64.0
MD09G1233800 Malus domestica HOM05D004117 ORTHO05D004520 5.2e-25 119.0 76 84.2
MD17G1230200 Malus domestica HOM05D004117 ORTHO05D004520 5.2e-25 119.0 76 84.2
Psat4g191560 Pisum sativum HOM05D004117 ORTHO05D004520 6.9e-25 118.6 68 94.1
Prupe.3G108900 Prunus persica HOM05D004117 ORTHO05D004520 6.9e-25 118.6 76 84.2
CSS0026162 Camellia sinensis var. sinensis HOM05D004117 ORTHO05D004520 8.9e-25 118.2 95 68.4
Nn3g21103 Nelumbo nucifera HOM05D004117 ORTHO05D004520 8.9e-25 118.2 92 71.7
arahy.Tifrunner.gnm1.ann1.EL27YX Arachis hypogaea HOM05D004117 ORTHO05D004520 1.5e-24 117.5 79 77.2
Lsat_1_v5_gn_5_110861 Lactuca sativa HOM05D002313 ORTHO05D004520 1.5e-24 117.5 75 78.7
Ah.01g004740 Amaranthus hybridus HOM05D004117 ORTHO05D004520 2.6e-24 116.7 80 76.2
arahy.Tifrunner.gnm1.ann1.S8R0TP Arachis hypogaea HOM05D004117 ORTHO05D004520 2.6e-24 116.7 79 77.2
Glyma.09G101300 Glycine max HOM05D004117 ORTHO05D004520 2.6e-24 116.7 76 82.9
TAR030G0002 Trochodendron aralioides HOM05D004117 ORTHO05D004520 2.6e-24 116.7 95 68.4
Actinidia11177 Actinidia chinensis HOM05D004117 ORTHO05D004520 4.4e-24 115.9 68 88.2
Sc21g0004310 Simmondsia chinensis HOM05D004117 ORTHO05D004520 4.4e-24 115.9 83 77.1
CiPaw.04G134900 Carya illinoinensis HOM05D004117 ORTHO05D004520 5.8e-24 115.5 76 78.9
Gohir.A11G059900 Gossypium hirsutum HOM05D004117 ORTHO05D004520 5.8e-24 115.5 78 79.5
HanXRQChr01g0028621 Helianthus annuus HOM05D004117 ORTHO05D004520 5.8e-24 115.5 76 78.9
Gohir.D11G064000 Gossypium hirsutum HOM05D004117 ORTHO05D004520 7.6e-24 115.2 78 78.2
Gorai.007G069200 Gossypium raimondii HOM05D004117 ORTHO05D004520 7.6e-24 115.2 78 78.2
Lsat_1_v5_gn_4_26681 Lactuca sativa HOM05D004117 ORTHO05D004520 7.6e-24 115.2 76 80.3
Lalb_Chr10g0106881 Lupinus albus HOM05D004117 ORTHO05D004520 9.9e-24 114.8 68 91.2
Rhsim06G0124300 Rhododendron simsii HOM05D004117 ORTHO05D004520 9.9e-24 114.8 76 80.3
Sed0017214 Sechium edule HOM05D004117 ORTHO05D004520 9.9e-24 114.8 75 84.0
HPP92_009031 Vanilla planifolia HOM05D004117 ORTHO05D004520 9.9e-24 114.8 77 76.6
Lj1C629G7 Lonicera japonica HOM05D004117 ORTHO05D004520 2.2e-23 113.6 92 66.3
Oeu032129.1 Olea europaea HOM05D004117 ORTHO05D004520 2.2e-23 113.6 69 85.5
Potri.006G278700 Populus trichocarpa HOM05D004117 ORTHO05D004520 2.2e-23 113.6 95 69.5
QL08p042899 Quercus lobata HOM05D004117 ORTHO05D004520 2.2e-23 113.6 68 85.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 2.9e-23 113.2 77 85.7
Manes.01G129950 Manihot esculenta HOM05D004117 ORTHO05D004520 2.9e-23 113.2 68 88.2
BcaB02g06797 Brassica carinata HOM05D004117 ORTHO05D004520 3.8e-23 112.8 131 55.0
Zm00001eb270990 Zea mays HOM05D004117 ORTHO05D004520 3.8e-23 112.8 76 78.9
ClCG09G020800 Citrullus lanatus HOM05D004117 ORTHO05D004520 4.9e-23 112.5 75 81.3
DCAR_014033 Daucus carota HOM05D004117 ORTHO05D004520 4.9e-23 112.5 68 86.8
Duzib264G0691 Durio zibethinus HOM05D004117 ORTHO05D004520 4.9e-23 112.5 70 85.7
Thecc.01G156100 Theobroma cacao HOM05D004117 ORTHO05D004520 4.9e-23 112.5 70 85.7
Aqoxy1G01993 Aquilegia oxysepala HOM05D004117 ORTHO05D004520 6.4e-23 112.1 68 86.8
AL1G16480 Arabidopsis lyrata HOM05D004117 ORTHO05D004520 6.4e-23 112.1 107 62.6
AT1G06470 Arabidopsis thaliana HOM05D004117 ORTHO05D004520 6.4e-23 112.1 107 62.6
CANSAT64G1854 Cannabis sativa HOM05D004117 ORTHO05D004520 6.4e-23 112.1 68 88.2
Carub.0001s0583 Capsella rubella HOM05D004117 ORTHO05D004520 6.4e-23 112.1 107 62.6
Dinv03089 Davidia involucrata HOM05D004117 ORTHO05D004520 6.4e-23 112.1 76 77.6
Thhalv10007752m.g Eutrema salsugineum HOM05D004117 ORTHO05D004520 6.4e-23 112.1 107 62.6
THA.LOC104800830 Tarenaya hassleriana HOM05D004117 ORTHO05D004520 6.4e-23 112.1 68 89.7
Dinv11422 Davidia involucrata HOM05D004117 ORTHO05D004520 8.4e-23 111.7 68 85.3
GSVIVG01020780001 Vitis vinifera HOM05D004117 ORTHO05D004520 8.4e-23 111.7 68 85.3
Atru.chr6.3571 Acer truncatum HOM05D004117 ORTHO05D004520 1.1e-22 111.3 68 88.2
Aa31LG1G7530 Aethionema arabicum HOM05D004117 ORTHO05D004520 1.1e-22 111.3 88 71.6
CAN.G803.15 Capsicum annuum HOM05D004117 ORTHO05D004520 1.1e-22 111.3 68 86.8
CARHR006080 Cardamine hirsuta HOM05D004117 ORTHO05D004520 1.1e-22 111.3 107 59.8
Peaxi162Scf00154g01022 Petunia axillaris HOM05D004117 ORTHO05D004520 1.1e-22 111.3 68 86.8
Solyc07g055700.2 Solanum lycopersicum HOM05D004117 ORTHO05D004520 1.1e-22 111.3 68 86.8
Sopen07g029060 Solanum pennellii HOM05D004117 ORTHO05D004520 1.1e-22 111.3 68 86.8
SGA_v2.0_scaffold46G17443 Striga asiatica HOM05D004117 ORTHO05D004520 1.1e-22 111.3 68 89.7
Nn6g34497 Nelumbo nucifera HOM05D004117 ORTHO05D004520 1.4e-22 110.9 68 85.3
Oeu028661.1 Olea europaea HOM05D004117 ORTHO05D004520 1.4e-22 110.9 68 86.8
Migut.H02117 Erythranthe guttata HOM05D004117 ORTHO05D004520 1.9e-22 110.5 68 88.2
Sp1g05230 Schrenkiella parvula HOM05D004117 ORTHO05D004520 1.9e-22 110.5 107 61.7
CsaV3_6G037880 Cucumis sativus L. HOM05D004117 ORTHO05D004520 2.4e-22 110.2 75 78.7
Duzib147G1030 Durio zibethinus HOM05D004117 ORTHO05D004520 2.4e-22 110.2 70 84.3
ECA233G4030 Erigeron canadensis HOM05D004117 ORTHO05D004520 2.4e-22 110.2 68 85.3
AUR62031790 Chenopodium quinoa HOM05D004117 ORTHO05D004520 3.2e-22 109.8 70 82.9
PSO541G2160 Papaver somniferum HOM05D004117 ORTHO05D004520 3.2e-22 109.8 68 85.3
Zm00001eb376680 Zea mays HOM05D004117 ORTHO05D004520 3.2e-22 109.8 76 77.6
Migut.M00208 Erythranthe guttata HOM05D004117 ORTHO05D004520 4.2e-22 109.4 68 85.3
PSO675G6070 Papaver somniferum HOM05D004117 ORTHO05D004520 4.2e-22 109.4 68 83.8
Gohir.D04G039266 Gossypium hirsutum HOM05D004117 ORTHO05D004520 5.4e-22 109.0 70 82.9
Gorai.012G044300 Gossypium raimondii HOM05D004117 ORTHO05D004520 5.4e-22 109.0 70 82.9
HanXRQChr12g0367511 Helianthus annuus HOM05D004117 ORTHO05D004520 5.4e-22 109.0 68 83.8
Hma1.2p1_0178F.1_g078380 Hydrangea macrophylla HOM05D004117 ORTHO05D004520 5.4e-22 109.0 68 83.8
Lsat_1_v5_gn_8_31821 Lactuca sativa HOM05D004117 ORTHO05D004520 5.4e-22 109.0 68 82.4
Solyc12g010990.3 Solanum lycopersicum HOM05D004117 ORTHO05D004520 5.4e-22 109.0 68 86.8
Sopen12g006350 Solanum pennellii HOM05D004117 ORTHO05D004520 5.4e-22 109.0 68 86.8
A08p35950 Brassica napus HOM05D004117 ORTHO05D004520 7.1e-22 108.6 107 59.8
CDE09G0584 Ceratophyllum demersum HOM05D004117 ORTHO05D004520 7.1e-22 108.6 81 72.8
DCAR_010149 Daucus carota HOM05D004117 ORTHO05D004520 7.1e-22 108.6 68 82.4
Gohir.A05G376700 Gossypium hirsutum HOM05D004117 ORTHO05D004520 7.1e-22 108.6 70 82.9
EL10Ac9g21032 Beta vulgaris HOM05D004117 ORTHO05D004520 9.3e-22 108.2 68 83.8
CAN.G486.15 Capsicum annuum HOM05D004117 ORTHO05D004520 9.3e-22 108.2 92 67.4
HPP92_000571 Vanilla planifolia HOM05D004117 ORTHO05D004520 1.2e-21 107.8 68 82.4
Peaxi162Scf00807g00047 Petunia axillaris HOM05D004117 ORTHO05D004520 1.6e-21 107.5 68 85.3
BcaB03g13416 Brassica carinata HOM05D004117 ORTHO05D004520 2.1e-21 107.1 107 59.8
A10p05130 Brassica napus HOM05D004117 ORTHO05D004520 2.1e-21 107.1 107 59.8
C05p04720 Brassica napus HOM05D004117 ORTHO05D004520 2.1e-21 107.1 107 59.8
BolC5t29244H Brassica oleracea HOM05D004117 ORTHO05D004520 2.1e-21 107.1 107 59.8
BolC8t47054H Brassica oleracea HOM05D004117 ORTHO05D004520 2.1e-21 107.1 107 59.8
BraA10t42778Z Brassica rapa HOM05D004117 ORTHO05D004520 2.1e-21 107.1 107 59.8
SalBow7G2879 Salvia bowleyana HOM05D004117 ORTHO05D004520 2.1e-21 107.1 68 85.3
Manes.02G087500 Manihot esculenta HOM05D004117 ORTHO05D004520 2.7e-21 106.7 68 82.4
Sc12g0003810 Simmondsia chinensis HOM05D004117 ORTHO05D004520 3.5e-21 106.3 68 83.8
Ah.01g016090 Amaranthus hybridus HOM05D004117 ORTHO05D004520 4.6e-21 105.9 76 73.7
SMO358G0570 Selaginella moellendorffii HOM05D004117 ORTHO05D004520 4.6e-21 105.9 107 54.2
C08p02610 Brassica napus HOM05D004117 ORTHO05D004520 6.0e-21 105.5 107 58.9
PGR042G1715 Punica granatum HOM05D004117 ORTHO05D004520 6.0e-21 105.5 68 85.3
unitig_62.g23112 Utricularia gibba HOM05D004117 ORTHO05D004520 1.7e-20 104.0 66 83.3
BcaC07g36812 Brassica carinata HOM05D004117 ORTHO05D004520 3.0e-20 103.2 68 79.4
Os01g0749900 Oryza sativa ssp. japonica HOM05D004117 ORTHO05D004520 3.9e-20 102.8 68 76.5
BraA08t35503Z Brassica rapa HOM05D004117 ORTHO05D004520 1.1e-19 101.3 115 55.7
Mapoly0038s0060 Marchantia polymorpha HOM05D004117 ORTHO05D004520 1.5e-19 100.9 95 54.7
Zm00001eb370980 Zea mays HOM05D004117 ORTHO05D004520 1.5e-19 100.9 68 75.0
arahy.Tifrunner.gnm1.ann1.KE4T51 Arachis hypogaea HOM05D000129 ORTHO05D000144 2.5e-19 100.1 59 79.7
arahy.Tifrunner.gnm1.ann1.WPXT30 Arachis hypogaea HOM05D000129 ORTHO05D000144 2.5e-19 100.1 59 79.7
Pp3c3_5740 Physcomitrium patens HOM05D004117 ORTHO05D004520 2.5e-19 100.1 78 69.2
Hund07729 Selenicereus undatus HOM05D004117 ORTHO05D004520 9.6e-19 98.2 82 69.5
Pp3c2_29630 Physcomitrium patens HOM05D004117 ORTHO05D004520 1.8e-17 94.0 68 70.6
COL.COLO4_33652 Corchorus olitorius HOM05D004117 ORTHO05D004520 3.1e-17 93.2 109 55.0
Nitab4.5_0003133g0050 Nicotiana tabacum HOM05D004117 ORTHO05D004520 3.1e-17 93.2 78 66.7
arahy.Tifrunner.gnm1.ann1.FHX6WZ Arachis hypogaea HOM05D000677 ORTHO05D000727 2.6e-16 90.1 110 60.0
arahy.Tifrunner.gnm1.ann1.VYP3BN Arachis hypogaea HOM05D002048 ORTHO05D002146 4.5e-16 89.4 65 81.5
arahy.Tifrunner.gnm1.ann1.0U8Z8Z Arachis hypogaea HOM05D000002 ORTHO05D023301 1.7e-15 87.4 72 73.6
arahy.Tifrunner.gnm1.ann1.J381VT Arachis hypogaea HOM05D001003 ORTHO05D003884 1.4e-14 84.3 64 78.1
arahy.Tifrunner.gnm1.ann1.D1D3TT Arachis hypogaea HOM05D002048 ORTHO05D004520 1.9e-14 84.0 65 78.5
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 1.9e-14 84.0 69 78.3
Zm00001eb317340 Zea mays HOM05D004117 ORTHO05D004520 4.2e-14 82.8 48 89.6
Zm00001eb358520 Zea mays HOM05D004117 ORTHO05D004520 9.3e-14 81.6 48 87.5
BcaC07g36811 Brassica carinata HOM05D004117 ORTHO05D004520 1.8e-12 77.4 105 47.6
FvH4_6g27881 Fragaria vesca HOM05D004117 ORTHO05D004520 1.1e-11 74.7 48 81.2
Ciclev10017482m.g Citrus clementina HOM05D004117 ORTHO05D004520 1.5e-11 74.3 45 86.7
arahy.Tifrunner.gnm1.ann1.PX7MES Arachis hypogaea HOM05D004117 ORTHO05D004520 1.9e-11 73.9 44 95.5
PRCOL_00002587 Prasinoderma coloniale HOM05D004117 ORTHO05D004520 5.6e-11 72.4 68 52.9
arahy.Tifrunner.gnm1.ann1.E1YPH0 Arachis hypogaea HOM05D004117 ORTHO05D004520 7.4e-11 72.0 107 44.9
Eucgr.A01947 Eucalyptus grandis HOM05D004117 ORTHO05D004520 3.6e-10 69.7 69 66.7
arahy.Tifrunner.gnm1.ann1.N5266S Arachis hypogaea HOM05D004117 ORTHO05D004520 6.2e-10 68.9 39 94.9
Cre07.g330850 Chlamydomonas reinhardtii HOM05D004117 ORTHO05D004520 1.4e-09 67.8 67 49.3
arahy.Tifrunner.gnm1.ann1.DV27UL Arachis hypogaea HOM05D000512 ORTHO05D002146 2.2e-07 60.5 60 63.3
PGSC0003DMG400007799 Solanum tuberosum HOM05D004117 ORTHO05D004520 5.5e-06 55.8 70 52.9

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (18 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (1 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (0 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (3 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (5 genes)

Program Settings