Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 4.1e-251 871.3 575 100.0
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 3.9e-169 599.0 531 82.9
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 4.4e-120 436.0 466 63.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 6.6e-116 422.2 509 64.2
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 4.3e-115 419.5 462 68.0
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 4.3e-115 419.5 462 68.0
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.2e-112 411.4 506 59.1
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 1.2e-112 411.4 502 57.0
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 1.0e-108 398.3 481 66.3
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 8.6e-108 395.2 486 54.7
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 1.5e-104 384.4 489 68.3
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 3.5e-101 373.2 512 62.9
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 2.2e-95 354.0 564 52.8
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 3.7e-87 326.6 500 46.4
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 4.9e-87 326.2 473 48.4
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 6.4e-87 325.9 465 52.5
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 1.9e-86 324.3 476 50.0
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 5.4e-86 322.8 469 47.3
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 7.8e-85 318.9 477 52.0
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 3.0e-84 317.0 468 57.3
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 5.1e-84 316.2 476 49.6
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 2.5e-83 313.9 463 51.4
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 3.3e-83 313.5 484 60.1
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 4.3e-83 313.2 469 52.9
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 7.3e-83 312.4 501 45.9
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 9.6e-83 312.0 468 51.1
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 1.6e-82 311.2 477 49.1
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 2.1e-82 310.8 471 57.3
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 2.8e-82 310.5 484 49.4
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 6.2e-82 309.3 469 53.1
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.1e-81 308.5 467 48.0
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.4e-81 308.1 469 53.7
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 1.8e-81 307.8 469 50.5
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 8.9e-81 305.4 472 46.4
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 2.0e-80 304.3 475 50.9
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 2.6e-80 303.9 477 55.6
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 5.8e-80 302.8 468 49.8
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 7.6e-80 302.4 491 51.3
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 2.2e-79 300.8 470 48.7
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 1.4e-78 298.1 466 50.9
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 1.9e-78 297.7 469 44.8
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 1.9e-78 297.7 479 58.0
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 7.1e-78 295.8 470 49.8
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 1.6e-77 294.7 463 47.9
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.6e-77 293.1 479 42.4
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 2.3e-76 290.8 492 43.9
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 3.0e-76 290.4 469 50.7
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 3.0e-76 290.4 493 45.0
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 3.9e-76 290.0 478 47.1
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 5.1e-76 289.7 471 47.8
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.1e-75 288.5 469 50.7
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 2.5e-75 287.3 463 53.6
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 3.3e-75 287.0 506 54.2
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 5.6e-75 286.2 473 52.6
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 9.6e-75 285.4 464 53.0
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 1.3e-74 285.0 470 53.4
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.3e-74 285.0 475 51.2
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 1.3e-74 285.0 470 53.6
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.3e-74 285.0 467 49.7
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 3.6e-74 283.5 552 46.7
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 3.6e-74 283.5 460 47.0
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 8.1e-74 282.3 471 51.8
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 1.4e-73 281.6 580 42.8
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 4.0e-73 280.0 467 50.3
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 4.5e-72 276.6 476 49.8
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 4.5e-72 276.6 476 49.8
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 5.8e-72 276.2 471 48.2
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 9.9e-72 275.4 469 47.5
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 1.3e-71 275.0 471 48.0
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.7e-71 274.6 474 56.1
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 6.4e-71 272.7 576 47.4
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.9e-70 271.2 515 46.0
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 2.4e-70 270.8 481 53.2
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 3.2e-70 270.4 460 53.3
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 7.1e-70 269.2 510 48.0
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 4.6e-69 266.5 473 49.0
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 4.6e-69 266.5 475 53.3
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 8.7e-68 262.3 463 52.9
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 4.3e-67 260.0 533 49.7
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 4.3e-67 260.0 529 55.2
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 5.6e-67 259.6 504 51.4
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.6e-66 258.1 475 47.6
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.6e-66 258.1 607 42.0
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 1.8e-65 254.6 460 45.4
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 5.3e-65 253.1 622 42.4
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.3e-65 253.1 622 42.4
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.2e-64 251.9 526 51.0
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 7.6e-64 249.2 620 41.9
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 7.6e-64 249.2 600 43.5
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.3e-63 248.4 584 44.5
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 4.9e-63 246.5 570 38.6
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 1.1e-62 245.4 172 73.8
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 2.3e-60 237.7 522 49.2
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 3.9e-60 236.9 178 71.9
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.9e-59 234.6 523 49.9
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 5.6e-59 233.0 501 43.1
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 7.6e-56 222.6 553 46.3
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 3.8e-55 220.3 624 39.9
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.1e-54 216.1 217 59.4
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 2.3e-52 211.1 177 66.7
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 3.0e-52 210.7 516 46.9
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 5.1e-52 209.9 171 66.7
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.7e-43 179.9 466 38.0
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 5.3e-41 173.3 461 39.9
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 7.7e-40 169.5 165 57.6
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 1.1e-38 165.6 505 48.1
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 1.9e-38 164.9 175 54.9
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 6.7e-36 156.4 176 55.1
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 6.7e-36 156.4 363 47.1
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 2.2e-34 151.4 161 62.1
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.1e-33 149.1 104 77.9
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.1e-33 149.1 94 81.9
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 7.7e-32 142.9 82 89.0
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.7e-31 141.7 94 76.6
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 3.8e-31 140.6 153 56.2
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.2e-30 136.3 430 32.8
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 3.7e-26 124.0 354 42.1
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 6.3e-26 123.2 105 63.8
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.1e-22 112.5 107 61.7
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 3.2e-22 110.9 118 60.2
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 5.5e-22 110.2 177 37.3
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 2.7e-21 107.8 158 51.9
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 9.7e-19 99.4 154 44.2
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.7e-18 98.6 63 81.0
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 4.5e-16 90.5 141 48.2
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 4.5e-16 90.5 53 84.9
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 1.3e-15 89.0 61 70.5
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 2.9e-15 87.8 177 33.9
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.5e-14 84.7 438 32.9
Actinidia26768 Actinidia chinensis HOM05D005328 ORTHO05D006049 5.7e-11 73.6 52 73.1
MCO07G343 Micromonas commoda HOM05D005328 ORTHO05D006049 9.8e-11 72.8 156 39.1
Cfa024420 Carpinus fangiana HOM05D005328 ORTHO05D006049 1.7e-10 72.0 175 32.0
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.3e-10 70.1 94 41.5
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 2.3e-07 61.6 68 51.5
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.5e-06 58.2 114 34.2
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.2e-06 57.8 102 34.3
Potri.016G000501 Populus trichocarpa HOM05D005328 ORTHO05D006049 5.5e-06 57.0 62 61.3
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 9.5e-06 56.2 109 39.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (4 genes)
Brassica oleracea (1 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (0 genes)
Capsella rubella (2 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (3 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (7 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (3 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings