Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.5e-74 280.8 133 100.0
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.5e-74 280.8 133 100.0
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 5.5e-66 254.2 133 88.7
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 7.1e-66 253.8 133 88.0
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 7.9e-65 250.4 133 85.0
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 1.0e-64 250.0 133 85.0
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 6.7e-64 247.3 133 85.7
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.5e-63 246.1 133 85.0
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 3.3e-63 245.0 129 85.3
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 6.3e-62 240.7 130 80.8
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 6.3e-62 240.7 133 82.0
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 8.2e-62 240.4 133 80.5
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.8e-61 239.2 130 80.8
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.1e-61 238.4 129 79.8
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 3.1e-61 238.4 133 79.7
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 3.1e-61 238.4 130 79.2
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 4.1e-61 238.0 133 80.5
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 4.1e-61 238.0 133 78.2
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 6.9e-61 237.3 133 81.2
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 6.9e-61 237.3 130 79.2
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.5e-60 236.1 133 78.2
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 2.0e-60 235.7 130 79.2
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 3.4e-60 235.0 130 79.2
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 4.5e-60 234.6 129 79.1
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 4.5e-60 234.6 130 81.5
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 4.5e-60 234.6 133 78.9
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 4.5e-60 234.6 130 78.5
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.5e-60 234.6 130 78.5
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.5e-60 234.6 130 78.5
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 7.7e-60 233.8 130 77.7
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 7.7e-60 233.8 129 82.2
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.0e-59 233.4 130 77.7
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 1.3e-59 233.0 130 77.7
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 1.3e-59 233.0 133 79.7
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.2e-59 232.3 130 80.8
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 3.8e-59 231.5 133 77.4
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 8.5e-59 230.3 130 76.9
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 1.1e-58 229.9 131 77.1
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 1.4e-58 229.6 130 75.4
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 2.5e-58 228.8 131 76.3
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 2.5e-58 228.8 130 77.7
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.2e-58 228.4 129 76.7
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 4.2e-58 228.0 130 76.2
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 4.2e-58 228.0 133 78.2
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.2e-57 226.5 135 76.3
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 1.2e-57 226.5 135 76.3
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.2e-57 226.5 133 75.9
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 1.2e-57 226.5 133 75.2
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 2.7e-57 225.3 133 75.2
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.7e-57 225.3 131 75.6
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 2.7e-57 225.3 131 75.6
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 3.6e-57 224.9 130 78.5
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.6e-57 224.9 135 74.8
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 6.1e-57 224.2 133 75.2
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 6.1e-57 224.2 133 74.4
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 6.1e-57 224.2 133 74.4
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 7.9e-57 223.8 135 74.1
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 1.0e-56 223.4 131 74.8
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 1.8e-56 222.6 130 75.4
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 1.8e-56 222.6 130 75.4
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 3.9e-56 221.5 130 75.4
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 5.1e-56 221.1 175 61.1
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 8.8e-56 220.3 130 76.2
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.0e-55 219.2 130 76.2
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.5e-55 218.8 129 73.6
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 3.3e-55 218.4 133 72.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 5.7e-55 217.6 131 74.0
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 7.4e-55 217.2 130 73.1
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 9.7e-55 216.9 137 74.5
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.3e-54 216.5 129 73.6
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 1.7e-54 216.1 133 72.2
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.7e-54 216.1 129 73.6
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 1.7e-54 216.1 132 76.5
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 2.2e-54 215.7 133 72.2
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 3.7e-54 214.9 129 72.9
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 1.4e-53 213.0 131 70.2
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 9.1e-53 210.3 129 73.6
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 2.0e-52 209.1 131 68.7
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.5e-50 202.2 131 69.5
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 9.4e-50 200.3 130 68.5
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 2.7e-49 198.7 130 68.5
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 7.9e-49 197.2 227 47.6
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.9e-48 194.9 131 64.1
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.1e-48 194.5 131 64.9
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 8.8e-48 193.7 130 65.4
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 2.0e-47 192.6 126 73.0
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 2.0e-47 192.6 133 67.7
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 9.7e-47 190.3 131 64.1
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.4e-45 186.4 131 62.6
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.4e-45 186.4 131 62.6
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.4e-45 186.4 131 62.6
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 1.8e-45 186.0 131 61.8
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 1.8e-45 186.0 131 61.8
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 2.4e-45 185.7 131 62.6
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.1e-45 185.3 131 62.6
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 3.1e-45 185.3 131 62.6
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 9.1e-45 183.7 131 62.6
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 5.9e-44 181.0 131 60.3
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 1.7e-43 179.5 131 61.1
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 6.1e-41 171.0 131 61.8
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 3.9e-40 168.3 156 53.8
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 2.0e-39 166.0 129 53.5
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 4.4e-39 164.9 130 53.1
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 2.8e-38 162.2 132 55.3
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 3.5e-36 155.2 136 50.7
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 3.5e-36 155.2 133 54.9
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.3e-35 153.3 130 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.7e-35 152.9 129 54.3
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 2.2e-35 152.5 85 78.8
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 2.9e-35 152.1 85 76.5
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 8.5e-35 150.6 130 50.0
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 1.2e-31 140.2 129 48.8
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 2.6e-31 139.0 102 58.8
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 4.8e-30 134.8 80 72.5
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 5.0e-27 124.8 69 76.8
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 1.6e-25 119.8 64 78.1
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 8.8e-24 114.0 109 53.2
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 1.2e-20 103.6 72 65.3
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 3.3e-18 95.5 124 39.5
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 2.8e-17 92.4 54 64.8
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 4.9e-14 81.6 48 77.1
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 1.8e-13 79.7 48 72.9
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.3e-11 72.8 54 57.4
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 2.9e-11 72.4 133 33.8
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.2e-09 67.0 43 67.4
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 8.0e-09 64.3 48 56.2

Acer truncatum (2 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (2 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (4 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (2 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (0 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (4 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings