Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.4DVC71 Arachis hypogaea HOM05D001750 ORTHO05D001825 1.7e-168 595.9 298 100.0
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 4.7e-126 454.9 274 87.2
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 3.5e-113 412.1 304 70.1
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 1.7e-112 409.8 319 67.7
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 1.6e-110 403.3 319 66.1
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 1.6e-110 403.3 319 66.1
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 3.4e-92 342.4 316 58.5
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 7.1e-90 334.7 320 59.7
Solyc00g500195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.9e-88 328.9 311 57.2
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 8.7e-88 327.8 313 56.5
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 8.7e-88 327.8 313 56.5
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 8.7e-88 327.8 313 56.5
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 8.7e-88 327.8 313 56.5
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 2.5e-87 326.2 317 55.5
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 4.3e-87 325.5 317 55.5
PGSC0003DMG400029008 Solanum tuberosum HOM05D001750 ORTHO05D001825 4.3e-87 325.5 310 56.8
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 1.6e-86 323.6 313 56.2
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 8.2e-86 321.2 316 55.7
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 1.4e-85 320.5 319 54.5
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 2.5e-82 309.7 321 52.6
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 2.5e-82 309.7 321 52.6
Lalb_Chr07g0191701 Lupinus albus HOM05D001750 ORTHO05D001825 5.5e-82 308.5 279 62.0
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 9.3e-82 307.8 327 52.9
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 4.6e-81 305.4 316 52.5
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.1e-81 305.1 308 55.8
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.1e-81 305.1 308 55.8
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 6.1e-81 305.1 321 51.7
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 2.3e-80 303.1 317 54.3
Gohir.A12G229700 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.0e-80 302.8 308 55.5
Gohir.1Z049402 Gossypium hirsutum HOM05D001750 ORTHO05D001825 5.7e-79 298.5 310 54.8
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 6.3e-78 295.0 329 51.4
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 8.2e-78 294.7 317 53.0
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 8.2e-78 294.7 317 53.0
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 8.2e-78 294.7 317 53.0
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 1.2e-76 290.8 317 52.1
Manes.18G138200 Manihot esculenta HOM05D001750 ORTHO05D001825 3.0e-64 249.6 307 49.5
EL10Ac1g00371 Beta vulgaris HOM05D001750 ORTHO05D001825 1.1e-63 247.7 257 54.9
BolSC49t61137H Brassica oleracea HOM05D001750 ORTHO05D001825 3.6e-57 226.1 264 51.9
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 3.3e-55 219.5 258 50.4
HanXRQChr05g0152391 Helianthus annuus HOM05D001750 ORTHO05D001825 3.1e-53 213.0 204 53.4
HanXRQChr11g0323701 Helianthus annuus HOM05D001750 ORTHO05D001825 3.1e-53 213.0 204 53.4
EL10Ac5g11664 Beta vulgaris HOM05D001750 ORTHO05D001825 7.0e-53 211.8 195 55.4
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 4.5e-52 209.1 227 54.2
Gohir.A12G084295 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.3e-48 196.8 193 55.4
SEGI_35420 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 4.0e-48 196.1 319 38.6
Lalb_Chr16g0388591 Lupinus albus HOM05D001750 ORTHO05D001825 7.7e-44 181.8 122 75.4
HanXRQChr01g0020111 Helianthus annuus HOM05D001750 ORTHO05D001825 7.2e-42 175.3 177 52.5
BolSC35t60699H Brassica oleracea HOM05D001750 ORTHO05D001825 3.0e-32 143.3 186 47.8
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 6.8e-32 142.1 79 88.6
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 6.8e-32 142.1 159 55.3
Lj9P89T20 Lonicera japonica HOM05D001750 ORTHO05D001825 1.6e-28 131.0 167 47.3
GSVIVG01004971001 Vitis vinifera HOM05D001750 ORTHO05D001825 7.3e-26 122.1 78 76.9
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 2.8e-25 120.2 68 83.8
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 6.2e-25 119.0 154 49.4
PGSC0003DMG400010958 Solanum tuberosum HOM05D001750 ORTHO05D001825 8.0e-25 118.6 69 81.2
Psat5g142840 Pisum sativum HOM05D001750 ORTHO05D001825 1.4e-24 117.9 68 85.3
Nn212s45208 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.3e-24 117.1 134 53.0
Gohir.A08G055950 Gossypium hirsutum HOM05D001750 ORTHO05D001825 5.2e-24 115.9 112 57.1
Prupe.2G145900 Prunus persica HOM05D001750 ORTHO05D001825 2.0e-23 114.0 92 65.2
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 2.6e-23 113.6 68 77.9
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 2.6e-23 113.6 68 77.9
Ciclev10013979m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.4e-23 113.2 69 78.3
Ciclev10013982m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.4e-23 113.2 69 78.3
Ciclev10013988m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.4e-23 113.2 69 78.3
Ciclev10013998m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.4e-23 113.2 69 78.3
Ciclev10014001m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.4e-23 113.2 69 78.3
Ciclev10018421m.g Citrus clementina HOM05D001750 ORTHO05D001825 3.4e-23 113.2 69 78.3
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 4.4e-23 112.8 74 73.0
Ciclev10030453m.g Citrus clementina HOM05D001750 ORTHO05D001825 5.8e-23 112.5 86 66.3
Gohir.A04G058952 Gossypium hirsutum HOM05D001750 ORTHO05D001825 7.5e-23 112.1 112 52.7
Glyma.06G151800 Glycine max HOM05D001750 ORTHO05D001825 2.2e-22 110.5 173 47.4
Gohir.D09G044501 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.9e-22 110.2 68 77.9
AL7G50360 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 3.2e-21 106.7 69 76.8
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 3.2e-21 106.7 67 74.6
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 3.2e-21 106.7 69 72.5
arahy.Tifrunner.gnm1.ann1.X5PJ61 Arachis hypogaea HOM05D000445 ORTHO05D000314 5.4e-21 105.9 91 63.7
HanXRQChr13g0413591 Helianthus annuus HOM05D001750 ORTHO05D001825 5.4e-21 105.9 124 47.6
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.2e-20 104.8 80 67.5
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 1.6e-20 104.4 68 76.5
Gorai.006G066100 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.6e-20 104.4 74 71.6
EL10As28g24255 Beta vulgaris HOM05D001750 ORTHO05D001825 2.7e-20 103.6 116 53.4
BolC9t56810H Brassica oleracea HOM05D001750 ORTHO05D001825 3.5e-20 103.2 80 70.0
Solyc12g033070.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.5e-20 103.2 72 69.4
arahy.Tifrunner.gnm1.ann1.TS71JS Arachis hypogaea HOM05D001750 ORTHO05D001825 5.0e-19 99.4 67 79.1
Gorai.010G151000 Gossypium raimondii HOM05D001750 ORTHO05D001825 8.6e-19 98.6 74 66.2
Oeu012766.1 Olea europaea HOM05D001750 ORTHO05D001825 7.3e-18 95.5 72 66.7
SEGI_32159 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 9.5e-18 95.1 167 41.3
SMO086G0048 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 1.2e-17 94.7 319 31.7
Gohir.A07G167090 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.6e-17 94.4 59 76.3
Psat0ss8367g0120 Pisum sativum HOM05D001750 ORTHO05D001825 1.6e-17 94.4 51 90.2
Solyc01g017110.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.2e-17 92.4 197 33.5
HanXRQChr17g0557811 Helianthus annuus HOM05D001750 ORTHO05D001825 8.1e-17 92.0 79 62.0
TPR.G34249 Trifolium pratense HOM05D001750 ORTHO05D048894 2.0e-15 87.4 64 70.3
CARHR212490 Cardamine hirsuta HOM05D001750 ORTHO05D001825 4.4e-15 86.3 72 66.7
Solyc02g011710.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 2.9e-14 83.6 53 75.5
Solyc11g044645.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.9e-14 82.8 78 59.0
Solyc11g044643.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 6.4e-14 82.4 109 42.2
Glyma.15G246000 Glycine max HOM05D001750 ORTHO05D001825 1.1e-13 81.6 77 57.1
RcHm_v2.0_CPg0501681 Rosa chinensis HOM05D001750 ORTHO05D001825 3.2e-13 80.1 63 68.3
Solyc12g033000.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 9.2e-13 78.6 55 70.9
Nn031s41610 Nelumbo nucifera HOM05D001750 ORTHO05D001825 1.2e-12 78.2 51 80.4
Gohir.D02G151844 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.5e-12 76.6 71 47.9
Lalb_Chr16g0388571 Lupinus albus HOM05D001750 ORTHO05D001825 1.7e-11 74.3 38 89.5
Solyc05g013090.3 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.0e-11 73.6 109 43.1
Gorai.005G170400 Gossypium raimondii HOM05D001750 ORTHO05D001825 5.1e-11 72.8 71 47.9
BolC2t10591H Brassica oleracea HOM05D001750 ORTHO05D001825 1.1e-10 71.6 69 56.5
Solyc05g013080.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.3e-10 70.1 57 49.1
Gorai.010G133500 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.6e-09 67.8 58 60.3
Gohir.D06G115850 Gossypium hirsutum HOM05D001750 ORTHO05D001825 4.7e-09 66.2 58 60.3
TPR.G19339 Trifolium pratense HOM05D001750 ORTHO05D001825 4.7e-09 66.2 49 67.3
Medtr3g032590 Medicago truncatula HOM05D000267 ORTHO05D016230 1.1e-08 65.1 41 78.0
Nn1g00556 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.6e-07 60.5 60 46.7
Migut.D01382 Erythranthe guttata HOM05D001750 ORTHO05D001825 3.4e-07 60.1 70 52.9
Oeu016296.1 Olea europaea HOM05D001750 ORTHO05D001825 1.3e-06 58.2 30 80.0

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (0 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (0 genes)
Beta vulgaris (4 genes)
Brassica carinata (0 genes)
Brassica napus (0 genes)
Brassica oleracea (7 genes)
Brassica rapa (4 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (5 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (7 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (0 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (0 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (0 genes)
Glycine max (2 genes)
Gossypium hirsutum (12 genes)
Gossypium raimondii (4 genes)
Helianthus annuus (14 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (0 genes)
Lonicera japonica (2 genes)
Lotus japonicus (2 genes)
Lupinus albus (4 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (4 genes)
Nicotiana tabacum (0 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (1 genes)
Petunia axillaris (0 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (0 genes)
Solanum lycopersicum (9 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (2 genes)
Striga asiatica (0 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (0 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (0 genes)
Vitis vinifera (1 genes)
Zea mays (0 genes)

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