Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9671 Trifolium pratense HOM05D005714 ORTHO05D006812 3.9e-172 608.2 351 100.0
Medtr6g016870 Medicago truncatula HOM05D005714 ORTHO05D006812 2.6e-147 525.8 353 82.7
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 4.3e-134 481.9 352 78.4
Lalb_Chr21g0317991 Lupinus albus HOM05D005714 ORTHO05D006812 2.1e-120 436.4 353 71.1
Phvul.004G049100 Phaseolus vulgaris HOM05D005714 ORTHO05D006812 1.9e-110 403.3 352 66.8
arahy.Tifrunner.gnm1.ann1.AEQW57 Arachis hypogaea HOM05D005714 ORTHO05D006812 9.6e-110 401.0 351 71.8
arahy.Tifrunner.gnm1.ann1.R8VTVZ Arachis hypogaea HOM05D005714 ORTHO05D006812 7.6e-107 391.3 373 67.6
Thecc.04G144400 Theobroma cacao HOM05D005714 ORTHO05D006812 9.6e-102 374.4 355 62.0
COL.COLO4_03920 Corchorus olitorius HOM05D005714 ORTHO05D006812 6.2e-101 371.7 354 61.0
Dinv33913 Davidia involucrata HOM05D005714 ORTHO05D006812 6.2e-101 371.7 356 61.8
Lj2g0024465 Lotus japonicus HOM05D005714 ORTHO05D006812 7.6e-99 364.8 341 62.2
Prupe.3G242300 Prunus persica HOM05D005714 ORTHO05D006812 9.9e-99 364.4 355 61.4
CANSAT64G2721 Cannabis sativa HOM05D005714 ORTHO05D006812 1.3e-98 364.0 355 62.0
Gohir.D11G174600 Gossypium hirsutum HOM05D005714 ORTHO05D006812 4.9e-98 362.1 355 62.0
Gorai.007G187100 Gossypium raimondii HOM05D005714 ORTHO05D006812 1.4e-97 360.5 355 61.7
CiPaw.03G006400 Carya illinoinensis HOM05D005714 ORTHO05D006812 7.1e-97 358.2 355 61.7
FvH4_6g45610 Fragaria vesca HOM05D005714 ORTHO05D006812 1.0e-95 354.4 355 60.8
Potri.017G110300 Populus trichocarpa HOM05D005714 ORTHO05D006812 5.1e-95 352.1 352 59.9
THA.LOC104802994 Tarenaya hassleriana HOM05D005714 ORTHO05D006812 6.6e-95 351.7 354 61.3
MD09G1081200 Malus domestica HOM05D005714 ORTHO05D006812 1.9e-94 350.1 353 60.1
Eucgr.J01456 Eucalyptus grandis HOM05D005714 ORTHO05D006812 7.3e-94 348.2 352 58.5
RcHm_v2.0_Chr2g0163761 Rosa chinensis HOM05D005714 ORTHO05D006812 9.6e-94 347.8 355 59.4
CSS0016024 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.3e-93 347.4 358 59.8
Sabra17G0092200 Salix brachista HOM05D005714 ORTHO05D006812 1.3e-93 347.4 353 59.2
GSVIVG01036468001 Vitis vinifera HOM05D005714 ORTHO05D006812 1.3e-93 347.4 352 59.4
CSS0020756 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 1.6e-93 347.1 358 59.8
Cfa007977 Carpinus fangiana HOM05D001801 ORTHO05D001739 1.6e-93 347.1 354 59.6
Oeu032870.1 Olea europaea HOM05D005714 ORTHO05D006812 2.8e-93 346.3 356 59.3
Psat1g062640 Pisum sativum HOM05D005714 ORTHO05D006812 4.8e-93 345.5 233 85.0
MSTRG.2945 Avicennia marina HOM05D005714 ORTHO05D006812 6.2e-93 345.1 356 58.7
Lj7A8G44 Lonicera japonica HOM05D005714 ORTHO05D006812 1.1e-92 344.4 356 58.7
SGA_v2.0_scaffold204G41660 Striga asiatica HOM05D005714 ORTHO05D006812 1.1e-92 344.4 354 57.9
Migut.H00540 Erythranthe guttata HOM05D005714 ORTHO05D006812 3.1e-92 342.8 358 58.9
Sed0016830 Sechium edule HOM05D005714 ORTHO05D006812 3.1e-92 342.8 356 59.3
MD17G1072600 Malus domestica HOM05D005714 ORTHO05D006812 4.0e-92 342.4 354 59.6
Peaxi162Scf00479g00037 Petunia axillaris HOM05D005714 ORTHO05D006812 6.9e-92 341.7 354 57.3
CsaV3_3G020470 Cucumis sativus L. HOM05D005714 ORTHO05D006812 3.4e-91 339.3 354 58.5
Manes.02G065100 Manihot esculenta HOM05D005714 ORTHO05D006812 3.4e-91 339.3 351 58.1
Sc10g0001430 Simmondsia chinensis HOM05D005714 ORTHO05D006812 9.9e-91 337.8 353 58.6
Cpa.g.sc179.47 Carica papaya HOM05D005714 ORTHO05D006812 1.3e-90 337.4 353 60.3
Cc07_g04960 Coffea canephora HOM05D005714 ORTHO05D006812 2.2e-90 336.7 355 58.0
Actinidia36301 Actinidia chinensis HOM05D005714 ORTHO05D006812 3.8e-90 335.9 352 59.1
MELO3C023776.2 Cucumis melo HOM05D005714 ORTHO05D006812 4.9e-90 335.5 361 56.5
Duzib138G1804 Durio zibethinus HOM05D005714 ORTHO05D006812 4.2e-89 332.4 355 57.7
PGR042G2576 Punica granatum HOM05D005714 ORTHO05D006812 4.2e-89 332.4 354 57.1
Atru.BG.225.p Acer truncatum HOM05D005714 ORTHO05D006812 7.1e-89 331.6 354 58.5
EL10Ac2g04627 Beta vulgaris HOM05D005714 ORTHO05D006812 9.3e-89 331.3 355 56.9
QL02p053457 Quercus lobata HOM05D005714 ORTHO05D006812 9.3e-89 331.3 354 61.6
CARHR197420 Cardamine hirsuta HOM05D005714 ORTHO05D006812 1.2e-88 330.9 352 58.0
Carub.0006s1407 Capsella rubella HOM05D005714 ORTHO05D006812 7.9e-88 328.2 353 58.1
AT5G15880 Arabidopsis thaliana HOM05D005714 ORTHO05D006812 1.8e-87 327.0 353 58.1
C03p08510 Brassica napus HOM05D005714 ORTHO05D006812 2.3e-87 326.6 353 57.5
ClCG05G011990 Citrullus lanatus HOM05D005714 ORTHO05D006812 2.3e-87 326.6 369 56.1
Rhsim10G0064900 Rhododendron simsii HOM05D005714 ORTHO05D006812 3.0e-87 326.2 366 56.8
Aa31LG11G13710 Aethionema arabicum HOM05D005714 ORTHO05D006812 3.9e-87 325.9 354 57.6
BolC3t13356H Brassica oleracea HOM05D005714 ORTHO05D006812 3.9e-87 325.9 353 57.2
Thhalv10015850m.g Eutrema salsugineum HOM05D005714 ORTHO05D006812 3.3e-86 322.8 352 57.4
Nitab4.5_0000612g0140 Nicotiana tabacum HOM05D005714 ORTHO05D006812 4.3e-86 322.4 352 56.5
SalBow1G3421 Salvia bowleyana HOM05D005714 ORTHO05D006812 5.6e-86 322.0 358 55.6
SalBow1G2935 Salvia bowleyana HOM05D005714 ORTHO05D006812 7.4e-86 321.6 358 55.6
Sp6g28230 Schrenkiella parvula HOM05D005714 ORTHO05D006812 9.6e-86 321.2 353 57.5
BraA10t44382Z Brassica rapa HOM05D005714 ORTHO05D006812 2.8e-85 319.7 353 56.7
BraA03t10072Z Brassica rapa HOM05D005714 ORTHO05D006812 3.7e-85 319.3 356 56.5
PGSC0003DMG400018763 Solanum tuberosum HOM05D005714 ORTHO05D006812 3.7e-85 319.3 359 55.4
Potri.004G105400 Populus trichocarpa HOM05D005714 ORTHO05D006812 8.1e-85 318.2 351 55.6
C03p08640 Brassica napus HOM05D005714 ORTHO05D006812 1.4e-84 317.4 353 57.5
BolC3t13366H Brassica oleracea HOM05D005714 ORTHO05D006812 1.4e-84 317.4 353 57.5
A03p07460 Brassica napus HOM05D005714 ORTHO05D006812 2.4e-84 316.6 356 56.2
AL6G26770 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 4.0e-84 315.8 352 57.4
AL6G26782 Arabidopsis lyrata HOM05D005714 ORTHO05D006812 4.0e-84 315.8 352 57.4
BraA03t10075Z Brassica rapa HOM05D005714 ORTHO05D006812 6.9e-84 315.1 356 56.2
Ah.10g037360 Amaranthus hybridus HOM05D005714 ORTHO05D006812 5.8e-83 312.0 346 54.0
PSO063G3590 Papaver somniferum HOM05D005714 ORTHO05D006812 5.8e-83 312.0 357 54.1
Aqoxy3G03832 Aquilegia oxysepala HOM05D005714 ORTHO05D006812 7.6e-83 311.6 354 55.4
BcaB08g36870 Brassica carinata HOM05D005714 ORTHO05D006812 1.3e-82 310.8 353 55.0
Nn3g17645 Nelumbo nucifera HOM05D005714 ORTHO05D006812 1.3e-82 310.8 366 53.8
ECA232G3066 Erigeron canadensis HOM05D005714 ORTHO05D006812 2.9e-82 309.7 354 54.5
CSS0044543 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 3.8e-82 309.3 363 56.7
CSS0047938 Camellia sinensis var. sinensis HOM05D005714 ORTHO05D006812 3.8e-82 309.3 363 56.7
Sabra04G0076700 Salix brachista HOM05D005714 ORTHO05D006812 3.8e-82 309.3 421 47.7
MBI15_g36941_MAGBIO Magnolia biondii HOM05D005714 ORTHO05D006812 4.9e-82 308.9 354 53.4
Nitab4.5_0003161g0010 Nicotiana tabacum HOM05D005714 ORTHO05D006812 4.2e-81 305.8 347 53.6
Hund16108 Selenicereus undatus HOM05D005714 ORTHO05D006812 4.6e-80 302.4 369 52.6
FAN09G3422 Fragaria x ananassa HOM05D005714 ORTHO05D006812 1.8e-79 300.4 353 55.2
TWI74G1644 Tripterygium wilfordii HOM05D005714 ORTHO05D006812 5.1e-79 298.9 355 54.1
CAN.G551.30 Capsicum annuum HOM05D005714 ORTHO05D006812 7.4e-78 295.0 352 54.3
BolC9t58957H Brassica oleracea HOM05D005714 ORTHO05D006812 1.3e-77 294.3 359 52.9
BcaB01g05015 Brassica carinata HOM05D005714 ORTHO05D006812 2.8e-77 293.1 350 54.0
PSO782G2399 Papaver somniferum HOM05D005714 ORTHO05D006812 7.6e-75 285.0 343 52.8
Ciclev10012317m.g Citrus clementina HOM05D005714 ORTHO05D006812 1.1e-73 281.2 302 57.6
HanXRQChr15g0490211 Helianthus annuus HOM05D005714 ORTHO05D006812 1.1e-73 281.2 354 52.3
Gohir.A11G168300 Gossypium hirsutum HOM05D005714 ORTHO05D006812 1.6e-72 277.3 253 64.8
vmacro05584 Vaccinium macrocarpon HOM05D005714 ORTHO05D006812 1.0e-71 274.6 401 47.9
Lsat_1_v5_gn_4_175801 Lactuca sativa HOM05D005714 ORTHO05D006812 2.3e-71 273.5 305 56.1
HPP92_027404 Vanilla planifolia HOM05D005714 ORTHO05D006812 4.8e-69 265.8 355 50.1
CDE02G2817 Ceratophyllum demersum HOM05D005714 ORTHO05D006812 4.2e-65 252.7 382 44.5
Os09g0108400 Oryza sativa ssp. japonica HOM05D005714 ORTHO05D006812 1.4e-63 247.7 353 47.0
unitig_899.g15126 Utricularia gibba HOM05D005714 ORTHO05D006812 1.1e-62 244.6 354 48.3
VMungo0464G1377 Vigna mungo HOM05D005714 ORTHO05D006812 1.5e-62 244.2 236 61.9
Glyma.19G041200 Glycine max HOM05D005714 ORTHO05D006812 2.1e-56 223.8 190 66.8
FAN05G0119 Fragaria x ananassa HOM05D005714 ORTHO05D006812 2.4e-52 210.3 204 63.2
Actinidia18116 Actinidia chinensis HOM05D005714 ORTHO05D006812 7.7e-51 205.3 354 45.2
Zm00001eb208920 Zea mays HOM05D005714 ORTHO05D006812 7.7e-51 205.3 333 43.2
Solyc03g046260.2 Solanum lycopersicum HOM05D005714 ORTHO05D006812 5.5e-49 199.1 233 54.5
RcHm_v2.0_Chr2g0163701 Rosa chinensis HOM05D005714 ORTHO05D006812 2.0e-46 190.7 142 73.2
TAR622G1272 Trochodendron aralioides HOM05D005714 ORTHO05D006812 6.3e-45 185.7 175 61.7
MD17G1072400 Malus domestica HOM05D005714 ORTHO05D006812 2.6e-38 163.7 205 54.1
Cfa007975 Carpinus fangiana HOM05D005714 ORTHO05D006812 7.5e-38 162.2 319 40.1
Pp3c1_6350 Physcomitrium patens HOM05D005714 ORTHO05D006812 6.3e-37 159.1 376 36.7
AagrBONN_evm.TU.Sc2ySwM_344.4539 Anthoceros agrestis HOM05D005714 ORTHO05D006812 1.7e-34 151.0 294 38.1
ATR0752G125 Amborella trichopoda HOM05D005714 ORTHO05D006812 2.5e-33 147.1 151 58.3
C09p61160 Brassica napus HOM05D005714 ORTHO05D006812 5.2e-31 139.4 113 65.5
Medtr3g067495 Medicago truncatula HOM05D005714 ORTHO05D006812 2.6e-30 137.1 94 78.7
AUR62014554 Chenopodium quinoa HOM05D005714 ORTHO05D006812 1.7e-29 134.4 238 39.9
SMO139G0044 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 1.1e-28 131.7 351 35.9
AUR62008947 Chenopodium quinoa HOM05D005714 ORTHO05D006812 1.8e-28 131.0 240 40.4
Sopen03g009720 Solanum pennellii HOM05D005714 ORTHO05D006812 1.2e-27 128.3 97 72.2
A10p17320 Brassica napus HOM05D000327 ORTHO05D006812 1.3e-21 108.2 205 42.0
SMO145G0024 Selaginella moellendorffii HOM05D005714 ORTHO05D006812 4.1e-20 103.2 261 37.5
ATR0752G036 Amborella trichopoda HOM05D005714 ORTHO05D006812 1.6e-19 101.3 227 38.8
Mapoly0066s0019 Marchantia polymorpha HOM05D005714 ORTHO05D006812 5.0e-18 96.3 374 29.1
SEGI_16525 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 2.9e-13 80.5 95 45.3
BcaB07g33635 Brassica carinata HOM05D005714 ORTHO05D006812 4.1e-12 76.6 123 44.7
BcaC04g18926 Brassica carinata HOM05D005714 ORTHO05D006812 4.1e-12 76.6 316 29.7
C09p61150 Brassica napus HOM05D005714 ORTHO05D006812 4.1e-12 76.6 82 58.5
SEGI_18448 Sequoiadendron giganteum HOM05D005714 ORTHO05D006812 1.2e-11 75.1 184 36.4
FAN09G3753 Fragaria x ananassa HOM05D001104 ORTHO05D008876 3.0e-10 70.5 89 51.7
SGA_v2.0_scaffold254G45250 Striga asiatica HOM05D005714 ORTHO05D051379 6.6e-10 69.3 46 78.3
RcHm_v2.0_Chr2g0163621 Rosa chinensis HOM05D005714 ORTHO05D006812 2.5e-09 67.4 81 49.4
RcHm_v2.0_Chr2g0163721 Rosa chinensis HOM05D005714 ORTHO05D006812 1.6e-08 64.7 70 48.6
FvH4_4g27140 Fragaria vesca HOM05D063885 ORTHO05D046237 1.2e-06 58.5 43 74.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (6 genes)
Brassica oleracea (3 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (0 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (4 genes)
Salix brachista (2 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings