Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 3.6e-183 644.8 331 100.0
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.1e-155 551.6 331 86.7
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 9.2e-155 550.4 329 86.0
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 3.9e-153 545.0 329 85.7
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 5.0e-153 544.7 327 85.6
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.1e-152 543.5 329 85.4
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.9e-152 542.7 331 84.9
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 9.5e-152 540.4 329 85.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 2.1e-151 539.3 329 84.2
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 4.7e-151 538.1 329 85.1
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 4.7e-151 538.1 329 85.1
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 4.7e-151 538.1 329 84.2
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 3.1e-150 535.4 329 83.3
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 4.0e-150 535.0 335 83.6
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.5e-149 533.1 332 83.4
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.9e-147 526.2 328 82.6
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 7.1e-147 524.2 328 82.3
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 9.2e-147 523.9 327 82.9
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.2e-146 523.5 332 80.7
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 7.8e-146 520.8 330 82.1
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 7.8e-146 520.8 328 81.7
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 1.3e-145 520.0 327 82.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 3.9e-145 518.5 328 82.0
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 3.9e-145 518.5 328 81.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 5.1e-145 518.1 330 81.8
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.5e-144 516.5 332 81.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 2.5e-144 515.8 328 81.4
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 3.3e-144 515.4 330 80.9
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 5.6e-144 514.6 332 80.4
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 7.3e-144 514.2 325 81.8
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.1e-143 512.7 330 80.3
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.7e-143 511.5 327 81.7
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.1e-142 510.4 325 82.2
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.0e-142 508.4 330 80.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.2e-142 508.1 333 79.9
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.2e-142 508.1 333 79.9
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.8e-142 507.7 330 80.6
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.8e-142 507.7 327 80.1
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.6e-141 505.8 327 79.8
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.6e-141 505.8 327 80.1
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.4e-141 505.4 327 81.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 7.6e-141 504.2 327 80.7
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.9e-140 502.3 330 80.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.7e-140 501.9 327 80.4
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 8.4e-140 500.7 329 78.4
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 2.4e-139 499.2 329 78.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 7.1e-139 497.7 330 77.3
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 7.1e-139 497.7 329 77.8
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 7.1e-139 497.7 329 77.8
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 7.1e-139 497.7 329 77.8
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 7.1e-139 497.7 329 77.8
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 9.2e-139 497.3 329 78.1
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.2e-139 497.3 330 77.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 9.2e-139 497.3 330 77.9
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 9.2e-139 497.3 330 77.9
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.1e-138 496.1 330 77.6
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-138 496.1 330 77.3
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.1e-138 496.1 329 79.6
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 3.5e-138 495.4 327 77.1
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.6e-138 495.0 328 76.8
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 6.0e-138 494.6 329 77.5
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 6.0e-138 494.6 330 77.3
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.0e-138 494.6 330 77.0
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 7.8e-138 494.2 329 77.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 7.8e-138 494.2 330 77.0
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.0e-137 493.8 330 76.7
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.7e-137 493.0 330 76.7
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.0e-137 492.3 327 77.4
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.9e-137 491.9 330 76.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 5.1e-137 491.5 326 77.6
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 6.6e-137 491.1 329 76.9
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 8.6e-137 490.7 328 76.5
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.1e-136 490.3 330 76.7
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.1e-136 490.3 329 77.8
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.5e-136 490.0 325 77.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.9e-136 489.6 331 77.6
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.5e-136 489.2 331 76.4
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 5.6e-136 488.0 371 71.7
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 5.6e-136 488.0 328 76.2
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 5.6e-136 488.0 330 75.2
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 9.6e-136 487.3 384 69.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.6e-135 486.5 332 75.3
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.6e-135 485.3 329 76.3
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.2e-135 484.6 331 76.1
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.4e-134 483.4 327 78.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.4e-134 482.6 333 75.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 4.0e-134 481.9 327 75.8
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 5.2e-134 481.5 357 70.9
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 6.8e-134 481.1 333 74.8
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-133 480.3 331 76.4
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.6e-133 479.2 331 76.1
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.6e-133 479.2 325 76.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.6e-133 479.2 314 78.3
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.4e-133 478.8 304 81.2
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 7.6e-133 477.6 329 75.4
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 3.2e-131 472.2 454 59.9
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 7.1e-131 471.1 327 74.0
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.7e-130 469.2 329 77.2
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-129 467.2 330 75.2
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.1e-128 463.8 330 71.5
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 5.6e-128 461.5 325 72.9
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.6e-128 460.7 329 74.5
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.1e-126 457.2 291 78.4
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.9e-124 449.1 330 75.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.1e-123 447.2 330 70.3
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.1e-122 443.0 325 70.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.4e-118 430.3 377 64.7
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.9e-118 427.9 300 74.7
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.1e-114 416.4 331 68.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 6.0e-114 414.8 279 75.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.5e-112 410.2 329 68.4
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 4.2e-107 392.1 332 65.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 9.3e-107 391.0 317 62.1
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 3.9e-105 385.6 234 84.6
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 3.7e-103 379.0 323 64.1
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.4e-102 376.3 324 59.3
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 5.0e-100 368.6 330 59.1
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-94 350.5 233 74.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 7.2e-91 338.2 315 58.7
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 8.8e-89 331.3 274 64.2
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 5.9e-85 318.5 238 66.4
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 2.5e-83 313.2 197 82.7
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.8e-81 307.0 227 70.0
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 8.2e-79 298.1 220 74.5
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.2e-77 294.3 337 56.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 4.5e-77 292.4 335 54.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 4.5e-77 292.4 220 72.7
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.2e-75 286.2 339 45.1
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 3.0e-73 279.6 226 69.9
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 2.0e-69 266.9 167 79.0
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.4e-62 243.4 163 79.1
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.5e-59 233.4 268 51.1
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.2e-58 231.1 163 72.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.7e-56 222.2 329 45.6
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 5.9e-53 212.2 133 81.2
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-48 198.0 130 79.2
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 3.7e-39 166.4 157 58.6
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 7.8e-37 158.7 162 56.8
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.0e-36 156.0 103 79.6
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 4.3e-35 152.9 89 80.9
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 8.1e-34 148.7 103 75.7
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 6.4e-31 139.0 195 47.2
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.9e-30 137.5 88 81.8
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 1.0e-28 131.7 69 88.4
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.7e-28 131.0 90 78.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.5e-27 127.9 88 72.7
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.7e-26 122.9 82 74.4
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 6.2e-26 122.5 72 77.8
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.4e-25 121.3 73 84.9
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.4e-23 112.5 77 79.2
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.9e-22 110.9 75 69.3
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 1.9e-22 110.9 69 76.8
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.3e-20 104.8 151 43.7
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 5.4e-14 82.8 65 72.3
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-12 77.8 63 69.8
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 7.6e-08 62.4 85 47.1
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 1.3e-07 61.6 48 66.7
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.7e-07 61.2 34 82.4

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings