Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 3.6e-183 644.8 331 100.0
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 9.8e-181 636.7 331 98.5
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.4e-179 632.9 331 97.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 8.0e-175 617.1 327 96.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 5.7e-173 610.9 331 94.0
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 1.3e-169 599.7 331 92.4
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 2.3e-169 599.0 327 93.0
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 2.9e-169 598.6 331 92.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 3.8e-169 598.2 331 92.1
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.1e-168 596.7 329 92.4
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.3e-168 595.1 331 91.8
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 3.6e-167 591.7 337 91.1
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 4.7e-167 591.3 331 91.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 4.7e-167 591.3 331 91.2
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.3e-164 583.2 330 90.0
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 4.9e-164 581.3 328 89.6
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.8e-163 579.3 328 89.3
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 4.1e-163 578.2 327 90.5
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 5.4e-163 577.8 332 89.2
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 9.2e-163 577.0 328 89.0
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.2e-162 576.6 329 89.1
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 2.0e-162 575.9 328 88.7
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 2.0e-162 575.9 332 88.9
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.5e-162 575.1 332 88.6
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 7.8e-162 573.9 324 90.7
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.1e-160 570.1 330 87.9
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.1e-160 570.1 330 88.5
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.9e-160 569.3 332 87.7
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.9e-160 569.3 328 88.4
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 3.3e-160 568.5 327 88.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 5.6e-160 567.8 332 87.3
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.3e-160 567.4 324 90.4
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.3e-160 567.4 324 90.4
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.6e-159 565.1 330 87.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.0e-158 563.5 324 89.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.0e-158 563.5 332 87.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 2.3e-158 562.4 332 86.7
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.1e-158 562.0 330 87.6
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 4.0e-158 561.6 327 87.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 86.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.4e-157 558.1 332 85.8
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 4.4e-157 558.1 332 84.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 5.8e-157 557.8 327 86.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 7.5e-157 557.4 332 84.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.3e-156 556.6 332 84.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 86.1
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.7e-156 556.2 330 86.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.2e-156 555.8 327 86.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.9e-156 555.4 332 86.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-156 555.4 331 89.4
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.7e-156 555.1 330 85.8
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 3.7e-156 555.1 332 84.6
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.9e-156 554.7 328 85.1
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 4.9e-156 554.7 332 84.6
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.1e-155 553.5 332 84.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.4e-155 553.1 333 84.7
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 1.4e-155 553.1 332 84.3
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.9e-155 552.7 332 83.7
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.2e-155 552.0 332 83.7
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 4.1e-155 551.6 329 85.1
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 5.4e-155 551.2 329 85.1
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 5.4e-155 551.2 331 85.5
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 85.9
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 9.2e-155 550.4 324 86.1
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.2e-154 550.1 331 84.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.6e-154 549.7 329 84.8
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 3.5e-154 548.5 329 84.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.6e-154 548.1 333 84.1
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.6e-154 548.1 330 84.5
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 4.6e-154 548.1 386 76.4
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.0e-153 547.0 332 83.4
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.3e-153 546.6 327 87.2
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.3e-153 545.8 328 84.1
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 84.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.0e-153 545.4 329 83.9
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 3.9e-153 545.0 328 84.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.5e-152 543.1 362 80.4
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 2.5e-152 542.3 359 77.7
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.3e-152 542.0 327 83.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 3.3e-152 542.0 328 84.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 9.5e-152 540.4 329 83.9
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.2e-151 540.0 331 83.1
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.1e-151 539.3 329 84.2
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.4e-150 536.6 327 83.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 4.4e-149 531.6 331 80.7
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.5e-149 530.8 331 81.9
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 82.1
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 80.4
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.3e-148 530.0 331 81.6
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-148 529.6 331 81.6
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 1.1e-147 526.9 455 64.4
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.4e-147 526.6 314 85.4
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.5e-144 515.8 327 80.1
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-144 515.8 303 86.1
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 3.3e-144 515.4 330 81.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 5.6e-144 514.6 324 80.9
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.4e-141 505.0 332 80.7
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.6e-141 504.2 331 79.2
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.2e-138 496.9 328 77.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.6e-135 486.5 329 73.6
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.4e-134 482.6 331 77.3
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 3.4e-133 478.8 329 74.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-132 476.5 377 69.0
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.0e-129 467.2 330 75.5
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.3e-129 466.8 325 71.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 9.0e-126 454.1 234 99.1
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 2.0e-125 453.0 329 73.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 5.8e-125 451.4 278 81.7
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.7e-122 442.6 332 72.3
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 7.9e-114 414.5 323 69.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 4.5e-109 398.7 317 62.8
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 1.0e-108 397.5 325 59.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.2e-107 392.5 233 84.1
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 3.5e-106 389.0 330 61.5
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 6.3e-103 378.3 274 71.9
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.0e-100 370.9 321 62.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.7e-95 352.4 197 90.9
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.2e-91 338.2 339 60.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-89 334.3 335 60.3
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.0e-89 334.3 229 75.5
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.7e-87 327.0 239 66.9
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.2e-87 326.6 220 79.5
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-85 320.9 220 77.7
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-82 308.9 220 76.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.1e-81 305.4 167 90.4
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.6e-74 283.9 339 44.2
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 4.5e-69 265.8 165 83.0
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.0e-68 262.3 329 52.3
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 2.1e-66 256.9 268 56.0
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-66 256.9 165 78.2
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-58 229.9 135 84.4
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 1.0e-52 211.5 130 83.1
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.6e-42 177.6 162 62.3
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 5.2e-41 172.6 195 49.7
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.4e-40 169.9 103 81.6
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.4e-38 163.7 186 52.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 7.0e-38 162.2 103 80.6
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-36 158.3 87 87.4
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.1e-34 150.6 90 86.7
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 8.9e-33 145.2 92 81.5
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.4e-32 143.3 80 88.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 9.8e-32 141.7 88 79.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-31 141.0 74 94.6
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 9.2e-30 135.2 69 89.9
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.5e-27 127.9 72 84.7
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.2e-26 124.8 77 83.1
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-25 121.3 75 77.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.2e-25 119.4 72 84.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 8.4e-23 112.1 69 81.2
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-17 95.1 67 74.6
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 6.4e-15 85.9 65 70.8
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.9e-12 76.6 85 55.3
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings