Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 5.1e-174 614.4 326 100.0
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 8.8e-126 454.1 234 99.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 2.4e-123 446.0 234 97.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 3.5e-122 442.2 234 95.7
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 4.5e-122 441.8 234 96.2
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 6.5e-121 438.0 234 94.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.6e-119 432.2 234 93.6
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-117 426.8 234 92.7
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 7.5e-117 424.5 234 91.5
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.3e-116 423.7 234 92.3
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.7e-116 423.3 234 90.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.7e-116 423.3 234 91.5
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.2e-116 422.9 234 91.9
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 2.8e-116 422.5 234 91.9
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 3.7e-116 422.2 234 91.0
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 4.9e-116 421.8 234 90.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 8.3e-116 421.0 234 90.2
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.1e-115 420.6 234 89.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 2.4e-115 419.5 240 90.4
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 2.4e-115 419.5 234 89.7
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 3.1e-115 419.1 234 90.6
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 4.1e-115 418.7 234 90.6
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 5.4e-115 418.3 234 91.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 90.6
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 90.6
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 90.6
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 91.0
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 7.0e-115 417.9 234 91.0
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 7.8e-114 414.5 234 89.3
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 7.8e-114 414.5 234 88.9
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 7.8e-114 414.5 235 90.2
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.0e-113 414.1 234 89.7
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.9e-113 412.5 234 88.9
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 3.8e-113 412.1 234 89.3
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 3.8e-113 412.1 234 89.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 5.0e-113 411.8 234 88.9
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 8.6e-113 411.0 234 88.9
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-112 409.5 234 87.2
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 4.3e-112 408.7 234 87.2
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.3e-112 408.7 234 89.3
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.3e-112 407.9 234 89.7
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.5e-112 407.5 234 87.2
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.6e-111 405.6 234 87.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.7e-111 405.2 234 88.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.0e-110 404.1 234 87.6
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.2e-110 401.7 234 87.2
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 5.2e-110 401.7 234 85.9
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 6.8e-110 401.4 234 85.9
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.8e-110 401.4 234 85.9
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 8.9e-110 401.0 234 85.5
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-109 400.6 234 86.3
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 1.2e-109 400.6 234 85.5
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 85.9
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 85.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 85.9
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.0e-109 399.8 234 87.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 3.4e-109 399.1 234 84.6
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.4e-109 399.1 234 84.6
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 5.7e-109 398.3 234 84.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.3e-108 397.1 234 86.8
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-108 397.1 235 85.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.7e-108 396.7 234 85.0
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 4.9e-108 395.2 234 85.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 6.4e-108 394.8 235 85.1
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 6.4e-108 394.8 234 83.8
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.4e-107 393.7 234 83.8
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.4e-107 393.7 234 85.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 1.4e-107 393.7 272 77.6
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.8e-107 393.3 234 85.0
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.8e-107 393.3 234 85.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 4.1e-107 392.1 234 84.6
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 5.4e-107 391.7 234 83.3
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 5.4e-107 391.7 234 82.9
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 5.4e-107 391.7 234 83.8
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.0e-107 391.3 233 83.7
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 7.0e-107 391.3 234 83.3
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 7.0e-107 391.3 234 83.3
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.6e-106 390.2 234 84.2
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 1.6e-106 390.2 234 84.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.6e-106 390.2 234 85.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.7e-106 389.4 234 83.3
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.5e-106 389.0 234 83.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.6e-106 388.7 234 82.9
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 6.0e-106 388.3 234 82.1
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 7.8e-106 387.9 234 86.8
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 7.8e-106 387.9 234 84.2
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.3e-105 387.1 234 84.6
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.7e-105 386.7 234 81.6
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 2.3e-105 386.3 234 83.3
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.0e-105 386.0 235 83.0
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 8.6e-105 384.4 234 83.3
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.3e-104 382.5 261 75.1
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 7.3e-104 381.3 214 89.7
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 1.6e-103 380.2 246 79.7
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 3.6e-103 379.0 234 81.2
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.6e-103 379.0 234 82.5
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.8e-102 376.7 234 82.1
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.4e-101 372.5 238 80.7
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 6.4e-100 368.2 210 87.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 7.0e-99 364.8 234 84.2
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 6.0e-98 361.7 234 77.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.0e-97 360.9 235 80.4
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 2.5e-96 356.3 232 78.0
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.1e-95 353.2 234 74.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.6e-95 352.4 197 90.9
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.0e-93 346.7 234 76.9
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.6e-90 337.0 234 71.8
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.8e-90 334.7 197 86.3
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-87 326.6 220 79.5
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.2e-87 325.1 233 74.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.8e-86 323.6 280 65.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-85 320.9 220 77.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 2.9e-84 316.2 229 67.2
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.5e-82 309.3 188 81.4
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 4.6e-82 308.9 220 76.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 5.1e-81 305.4 167 90.4
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.8e-79 299.7 229 62.9
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.1e-78 297.7 235 68.9
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.2e-77 294.3 198 76.3
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.9e-75 287.0 229 64.2
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 8.7e-73 278.1 167 87.4
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.4e-59 234.2 178 69.7
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.3e-57 226.9 225 56.9
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.3e-55 221.1 232 48.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 1.3e-49 201.1 235 54.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.5e-48 196.8 131 75.6
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 9.7e-48 194.9 143 66.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.4e-46 191.0 233 53.2
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.1e-46 189.9 236 50.0
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.4e-38 163.7 186 52.7
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 6.9e-38 162.2 103 80.6
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.3e-32 143.3 80 88.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 9.7e-32 141.7 88 79.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-31 141.0 74 94.6
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.2e-25 119.4 72 84.7
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 2.8e-23 113.6 67 83.6
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.5e-21 106.3 66 80.3
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.6e-18 96.7 67 67.2
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 6.7e-17 92.4 55 81.8
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 2.2e-15 87.4 114 41.2
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 3.8e-12 76.6 85 55.3
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 2.7e-10 70.5 38 81.6
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 4.7e-10 69.7 37 83.8
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 8.8e-09 65.5 37 75.7
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 7.5e-08 62.4 40 75.0
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.4e-06 56.2 43 60.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (5 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (5 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (5 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (3 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings