Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.1e-187 659.8 333 100.0
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 3.1e-166 588.6 333 90.4
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 3.4e-165 585.1 325 92.0
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 7.5e-165 583.9 325 91.7
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 2.2e-164 582.4 325 91.4
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.9e-164 582.0 325 91.4
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.7e-164 581.6 325 91.1
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.7e-164 581.6 325 91.1
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.7e-164 581.6 325 91.1
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.7e-164 581.6 325 91.1
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.9e-163 579.3 314 93.6
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 2.4e-163 578.9 325 90.8
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 2.4e-163 578.9 325 91.1
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 5.2e-158 561.2 325 88.3
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 1.7e-156 556.2 331 84.0
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 2.2e-156 555.8 331 84.6
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 6.4e-156 554.3 325 85.5
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 8.4e-156 553.9 325 85.8
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.9e-155 552.7 327 84.1
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 1.9e-155 552.7 325 84.9
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 326 85.0
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 5.4e-155 551.2 326 85.0
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 7.1e-155 550.8 327 84.4
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.2e-154 550.1 326 88.0
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.1e-154 549.3 325 84.9
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 4.6e-154 548.1 331 83.1
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 4.6e-154 548.1 327 84.1
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 6.0e-154 547.7 331 83.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.0e-153 545.4 327 83.2
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 3.9e-153 545.0 325 83.1
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 6.6e-153 544.3 325 83.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 6.6e-153 544.3 325 84.3
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 8.7e-153 543.9 325 83.1
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.1e-152 543.5 331 82.5
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.1e-152 543.5 325 84.3
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.5e-152 542.3 331 82.5
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 4.3e-152 541.6 325 84.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 4.3e-152 541.6 325 82.8
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 4.3e-152 541.6 331 82.2
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 4.3e-152 541.6 331 82.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.3e-152 540.8 325 84.3
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.6e-151 539.7 325 84.0
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.6e-151 539.7 331 81.9
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 4.7e-151 538.1 325 83.4
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 8.1e-151 537.3 325 83.4
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 8.1e-151 537.3 325 83.7
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 1.8e-150 536.2 331 81.3
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.8e-150 536.2 325 82.2
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.4e-150 535.8 325 82.8
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 2.4e-150 535.8 331 81.3
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.1e-150 535.4 325 83.1
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 3.1e-150 535.4 331 81.6
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 4.0e-150 535.0 325 81.8
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 4.0e-150 535.0 332 81.3
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 6.9e-150 534.3 331 81.0
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 9.0e-150 533.9 331 81.0
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.2e-149 533.5 325 82.5
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.5e-149 533.1 325 82.8
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 3.4e-149 531.9 325 82.2
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.8e-149 531.2 331 80.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 7.6e-149 530.8 337 80.4
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 9.9e-149 530.4 364 76.1
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 9.9e-149 530.4 332 80.7
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 1.7e-148 529.6 324 83.3
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-148 528.9 331 80.1
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.9e-148 528.9 325 81.2
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.9e-148 528.1 325 82.2
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 8.4e-148 527.3 325 80.6
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.1e-147 526.9 331 79.2
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 1.4e-147 526.6 331 79.2
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.9e-147 526.2 325 80.6
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.4e-147 525.8 326 80.1
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-146 523.5 331 80.1
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.2e-146 523.5 325 80.3
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 1.6e-146 523.1 379 72.8
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.7e-146 522.3 325 80.6
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.7e-146 522.3 325 79.7
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.7e-146 522.3 325 79.7
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.5e-146 521.9 325 79.7
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.3e-145 519.2 325 80.3
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 3.0e-145 518.8 326 78.8
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 3.0e-145 518.8 327 79.5
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 3.0e-145 518.8 358 74.3
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 8.7e-145 517.3 326 78.5
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.1e-144 516.9 325 79.1
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.3e-144 515.4 325 81.5
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 5.6e-144 514.6 325 78.8
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 1.3e-143 513.5 333 78.4
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 6.2e-143 511.1 325 78.5
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.2e-141 506.9 331 76.7
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 5.4e-139 498.0 327 76.1
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.1e-139 497.7 331 75.5
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.2e-138 496.9 331 75.5
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.6e-138 496.5 327 75.8
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 3.9e-137 491.9 455 59.8
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.5e-136 489.2 302 81.1
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.3e-135 486.9 325 75.4
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.1e-135 486.1 334 75.7
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 3.7e-135 485.3 325 76.3
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.8e-134 483.0 300 80.7
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 9.9e-133 477.2 324 74.4
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 4.6e-130 468.4 330 70.9
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 6.7e-129 464.5 331 74.0
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 8.7e-129 464.2 331 74.6
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.2e-125 453.8 325 68.9
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.2e-123 445.3 377 63.9
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.6e-122 443.4 331 70.4
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 2.7e-122 442.6 325 67.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 5.1e-121 438.3 325 70.5
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 3.3e-120 435.6 326 69.9
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.7e-116 423.3 279 75.3
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.2e-115 419.1 330 68.2
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 8.8e-113 411.0 323 67.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 7.4e-112 407.9 270 79.6
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.5e-109 400.2 318 62.9
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.6e-109 399.4 317 69.4
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 7.7e-109 397.9 327 62.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 2.1e-106 389.8 234 83.3
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.7e-106 389.4 326 59.2
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.1e-98 363.2 233 77.3
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.4e-94 349.7 331 62.8
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.1e-86 322.8 333 57.1
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.0e-85 320.1 222 72.5
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.9e-83 313.5 234 65.8
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.2e-83 312.8 197 80.2
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.4e-80 302.8 220 72.7
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-78 297.4 220 71.4
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-75 287.3 220 70.9
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 9.5e-75 284.6 167 84.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 5.2e-73 278.9 325 54.8
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 5.2e-73 278.9 333 44.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 5.4e-70 268.9 164 82.9
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.5e-64 250.8 164 75.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 5.8e-64 248.8 268 54.9
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.2e-58 231.1 137 83.9
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-53 213.8 128 83.6
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.7e-44 184.1 158 66.5
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-38 164.9 102 77.5
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 4.2e-38 162.9 196 45.9
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 3.5e-37 159.8 195 50.3
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 5.6e-35 152.5 87 83.9
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.4e-32 143.3 91 79.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 4.4e-32 142.9 103 68.9
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 4.9e-31 139.4 69 92.8
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-30 136.0 88 77.3
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.7e-28 131.0 77 85.7
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-27 127.9 90 74.4
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 7.3e-27 125.6 72 83.3
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.6e-26 124.4 74 82.4
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 4.5e-24 116.3 82 69.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-23 114.8 65 83.1
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 2.4e-22 110.5 69 79.7
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 4.6e-21 106.3 151 41.1
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 5.3e-17 92.8 66 71.2
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-14 84.7 58 75.9
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.0e-07 62.0 82 48.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (0 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (6 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (6 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (6 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (3 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (4 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (3 genes)
Trochodendron aralioides (3 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings