Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 7.1e-99 364.0 192 100.0
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 4.7e-95 351.3 192 96.9
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 3.1e-94 348.6 192 95.8
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 3.8e-84 315.1 197 84.8
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.5e-80 303.1 192 83.9
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 3.3e-80 302.0 194 83.0
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 3.2e-75 285.4 196 78.6
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.8e-65 253.1 200 72.5
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 5.3e-62 241.5 203 67.5
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.5e-61 240.0 170 77.1
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 7.6e-61 237.7 164 76.2
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.0e-60 237.3 160 78.8
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.0e-60 237.3 166 74.7
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 1.7e-60 236.5 166 75.9
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 6.5e-60 234.6 152 79.6
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.1e-59 233.8 157 78.3
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.1e-59 233.8 198 68.2
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 1.9e-59 233.0 166 74.1
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 2.5e-59 232.6 160 79.4
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 2.5e-59 232.6 199 68.3
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 4.2e-59 231.9 171 74.3
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 4.2e-59 231.9 156 80.1
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 4.2e-59 231.9 152 80.9
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 5.5e-59 231.5 148 83.8
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 5.5e-59 231.5 163 74.8
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 5.5e-59 231.5 156 79.5
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 7.2e-59 231.1 173 73.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 7.2e-59 231.1 162 77.8
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 7.2e-59 231.1 153 80.4
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 9.4e-59 230.7 158 79.7
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 2.1e-58 229.6 157 76.4
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 2.7e-58 229.2 161 77.6
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 2.7e-58 229.2 166 74.1
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 3.6e-58 228.8 161 77.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 3.6e-58 228.8 156 78.8
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 3.6e-58 228.8 164 74.4
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 4.6e-58 228.4 155 79.4
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 4.6e-58 228.4 203 66.0
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 4.6e-58 228.4 203 66.0
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 4.6e-58 228.4 165 75.2
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 6.1e-58 228.0 180 71.1
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 7.9e-58 227.6 176 71.6
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 7.9e-58 227.6 176 71.6
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.0e-57 227.3 164 74.4
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.0e-57 227.3 164 74.4
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.0e-57 227.3 158 76.6
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 1.0e-57 227.3 160 76.9
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.4e-57 226.9 161 76.4
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.8e-57 226.5 156 77.6
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.8e-57 226.5 176 71.6
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 2.3e-57 226.1 164 73.8
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 2.3e-57 226.1 197 68.5
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 3.9e-57 225.3 166 74.7
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.9e-57 225.3 166 74.7
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.9e-57 225.3 161 76.4
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 3.9e-57 225.3 186 65.6
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 3.9e-57 225.3 158 77.2
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 8.8e-57 224.2 194 65.5
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.1e-56 223.8 172 72.1
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.1e-56 223.8 184 69.6
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.5e-56 223.4 152 78.9
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.9e-56 223.0 172 71.5
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 1.9e-56 223.0 156 76.9
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.9e-56 223.0 162 74.1
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.9e-56 223.0 166 73.5
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 1.9e-56 223.0 170 71.2
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 1.9e-56 223.0 162 75.9
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 2.5e-56 222.6 172 73.3
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 2.5e-56 222.6 173 72.8
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 2.5e-56 222.6 173 72.8
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.5e-56 222.6 161 73.9
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 2.5e-56 222.6 168 71.4
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.3e-56 222.2 166 73.5
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 3.3e-56 222.2 150 80.0
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 5.7e-56 221.5 172 72.7
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 5.7e-56 221.5 159 76.7
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 7.4e-56 221.1 161 76.4
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 7.4e-56 221.1 201 64.7
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 9.7e-56 220.7 148 77.7
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 9.7e-56 220.7 178 70.8
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 9.7e-56 220.7 196 66.8
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 1.3e-55 220.3 199 63.8
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.7e-55 219.9 156 72.4
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 2.2e-55 219.5 165 72.1
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.2e-55 219.5 161 73.3
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 2.8e-55 219.2 161 75.8
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 2.8e-55 219.2 161 75.2
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 4.8e-55 218.4 195 64.6
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 8.2e-55 217.6 177 66.7
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.1e-54 217.2 167 73.7
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.8e-54 216.5 162 74.7
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 4.1e-54 215.3 133 83.5
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 6.9e-54 214.5 161 72.7
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 9.1e-54 214.2 157 73.2
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 3.4e-53 212.2 181 67.4
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 3.4e-53 212.2 203 60.6
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 8.5e-52 207.6 196 64.8
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.1e-51 207.2 196 64.8
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 3.2e-51 205.7 157 71.3
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 2.3e-49 199.5 177 61.0
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 5.1e-49 198.4 148 71.6
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 8.8e-49 197.6 196 60.7
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 2.6e-48 196.1 146 71.9
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 5.7e-48 194.9 176 62.5
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 2.8e-47 192.6 131 76.3
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 3.7e-47 192.2 164 66.5
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.1e-46 190.7 117 83.8
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 2.4e-46 189.5 117 84.6
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 7.0e-46 188.0 120 81.7
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.0e-45 186.4 119 78.2
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 5.0e-44 181.8 130 73.1
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 1.9e-43 179.9 141 65.2
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 5.7e-40 168.3 170 55.3
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 2.8e-39 166.0 109 78.9
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.2e-36 156.4 130 60.0
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 4.7e-34 148.7 134 60.4
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 3.0e-33 146.0 161 55.9
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 3.0e-33 146.0 142 53.5
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 9.7e-32 141.0 123 64.2
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.3e-31 140.6 87 83.9
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.8e-31 139.4 87 83.9
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.8e-31 138.7 87 82.8
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.2e-26 124.0 133 55.6
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.6e-26 123.6 86 75.6
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 3.6e-26 122.5 92 71.7
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 1.4e-22 110.5 78 74.4
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.5e-19 99.8 99 57.6
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 8.0e-18 94.7 57 77.2
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.5e-08 63.9 105 37.1
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 3.2e-06 56.2 123 34.1
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 4.1e-06 55.8 122 32.8
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 5.4e-06 55.5 116 30.2
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 5.4e-06 55.5 128 30.5
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 7.0e-06 55.1 116 31.0

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (6 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (3 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (1 genes)

Program Settings