Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 2.1e-187 659.1 385 100.0
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 6.7e-181 637.5 385 93.0
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 7.4e-180 634.0 385 94.0
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 1.1e-162 577.0 387 80.6
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 2.4e-154 549.3 388 76.5
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 1.0e-152 543.9 388 76.8
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 3.2e-127 459.1 387 67.2
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 4.3e-111 405.6 382 57.3
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 2.1e-110 403.3 386 59.3
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 4.7e-110 402.1 384 61.2
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 1.0e-109 401.0 388 60.1
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 8.9e-109 397.9 362 62.7
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 6.4e-107 391.7 384 61.2
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 4.1e-106 389.0 398 57.3
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 3.5e-105 386.0 357 61.6
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 7.8e-105 384.8 387 57.1
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 1.9e-103 380.2 410 55.1
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 5.6e-103 378.6 388 58.5
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 9.5e-103 377.9 384 55.7
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 3.6e-102 375.9 388 53.6
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 8.0e-102 374.8 393 58.0
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 8.0e-102 374.8 363 60.1
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 1.1e-101 374.4 393 58.0
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 1.4e-101 374.0 401 55.9
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 1.8e-101 373.6 382 55.0
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 1.8e-101 373.6 382 55.0
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 1.8e-101 373.6 417 54.4
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 4.0e-101 372.5 384 58.1
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 4.0e-101 372.5 384 56.0
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 6.8e-101 371.7 384 57.6
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 8.9e-101 371.3 384 57.6
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.2e-100 370.9 399 56.6
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 2.6e-100 369.8 401 55.4
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 5.8e-100 368.6 367 56.1
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 1.3e-99 367.5 388 56.2
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.3e-99 367.5 391 54.0
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 1.7e-99 367.1 365 57.3
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 2.9e-99 366.3 409 57.5
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 2.9e-99 366.3 367 58.6
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.9e-98 363.6 386 54.1
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 2.4e-98 363.2 382 53.7
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 4.1e-98 362.5 382 55.5
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 4.1e-98 362.5 385 57.1
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 5.4e-98 362.1 354 56.5
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 9.2e-98 361.3 382 55.8
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 1.2e-97 360.9 387 59.4
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 1.6e-97 360.5 391 59.3
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 1.6e-97 360.5 384 54.2
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 2.7e-97 359.8 389 54.5
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 7.8e-97 358.2 389 55.5
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 1.0e-96 357.8 389 55.8
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 1.0e-96 357.8 384 58.1
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 2.3e-96 356.7 366 56.8
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 6.6e-96 355.1 364 60.7
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.5e-95 354.0 381 57.5
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 3.3e-95 352.8 391 51.9
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 7.3e-95 351.7 401 57.1
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 1.6e-94 350.5 395 56.2
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 2.8e-94 349.7 394 57.4
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 2.8e-94 349.7 369 55.8
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 3.6e-94 349.4 370 52.7
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 8.1e-94 348.2 451 49.4
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 8.1e-94 348.2 380 55.8
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 1.1e-93 347.8 370 54.3
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 1.8e-93 347.1 383 52.0
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 3.1e-93 346.3 365 55.3
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 4.0e-93 345.9 384 53.4
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 8.9e-93 344.7 393 53.4
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 1.2e-92 344.4 384 54.9
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 1.5e-92 344.0 373 52.0
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 2.0e-92 343.6 382 55.0
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 2.6e-92 343.2 354 55.6
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 2.6e-92 343.2 364 56.6
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 2.6e-92 343.2 365 55.6
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 2.6e-92 343.2 367 55.3
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 3.4e-92 342.8 446 48.4
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 4.4e-92 342.4 395 56.7
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 4.4e-92 342.4 462 50.2
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 2.9e-91 339.7 367 56.9
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 4.9e-91 339.0 395 51.4
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 6.4e-91 338.6 397 52.4
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 1.1e-90 337.8 404 50.7
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 1.9e-90 337.0 365 50.4
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 2.1e-89 333.6 370 55.7
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 4.6e-89 332.4 415 49.4
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 1.0e-88 331.3 361 56.0
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 3.9e-88 329.3 362 53.9
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 8.6e-88 328.2 358 51.1
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 2.5e-87 326.6 429 49.2
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 3.3e-87 326.2 368 53.3
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 3.3e-87 326.2 401 54.4
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 3.6e-86 322.8 384 52.3
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 2.4e-85 320.1 366 48.4
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 2.4e-85 320.1 428 46.5
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 1.2e-84 317.8 358 53.6
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 2.4e-82 310.1 321 55.5
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 2.4e-82 310.1 389 53.0
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 7.1e-82 308.5 383 53.0
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 2.1e-81 307.0 322 57.1
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 6.2e-78 295.4 338 56.5
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 1.3e-75 287.7 320 49.4
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 1.7e-75 287.3 440 46.8
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 3.0e-72 276.6 365 45.2
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 1.5e-71 274.2 383 45.4
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 7.4e-63 245.4 162 72.2
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 2.3e-56 223.8 143 76.9
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 1.4e-50 204.5 135 71.9
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 1.0e-48 198.4 353 41.1
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 4.5e-44 183.0 351 34.5
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 2.9e-43 180.3 239 43.9
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 6.5e-43 179.1 297 44.4
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 6.5e-43 179.1 358 33.5
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 6.1e-41 172.6 183 48.6
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 8.8e-40 168.7 110 75.5
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 4.1e-29 133.3 179 44.1
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 2.2e-27 127.5 270 30.4
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 2.0e-23 114.4 205 36.6
HPP92_011577 Vanilla planifolia HOM05D006549 ORTHO05D008080 6.3e-22 109.4 225 36.4
MELO3C015170.2 Cucumis melo HOM05D006549 ORTHO05D008080 2.6e-20 104.0 99 57.6
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 5.0e-19 99.8 64 75.0
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 4.2e-18 96.7 56 83.9
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 5.5e-18 96.3 178 33.7
BolC3t13160H Brassica oleracea HOM05D006549 ORTHO05D008080 1.2e-15 88.6 90 50.0
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 2.2e-14 84.3 64 68.8
Cpa.g.c41750 Carica papaya HOM05D006549 ORTHO05D008080 3.8e-11 73.6 65 61.5

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (3 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings