Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.1e-104 383.3 187 100.0
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 1.1e-104 383.3 187 100.0
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 3.7e-100 368.2 182 97.8
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 2.5e-96 355.5 182 92.3
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.9e-93 345.9 182 90.1
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.6e-92 342.8 185 89.2
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.6e-92 342.8 182 90.1
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 2.1e-92 342.4 182 89.0
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 4.8e-92 341.3 182 87.4
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.8e-92 341.3 182 88.5
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.1e-91 340.1 185 88.1
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.1e-91 340.1 182 88.5
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 3.1e-91 338.6 182 87.9
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 6.9e-91 337.4 182 86.3
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 6.9e-91 337.4 182 86.8
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 2.0e-90 335.9 182 84.6
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 4.5e-90 334.7 182 84.1
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 7.6e-90 334.0 182 84.1
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 7.6e-90 334.0 180 85.0
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 1.3e-89 333.2 182 84.1
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 1.7e-89 332.8 182 84.6
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 3.8e-89 331.6 182 85.2
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 3.8e-89 331.6 180 83.9
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 5.0e-89 331.3 182 83.0
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 5.0e-89 331.3 182 83.0
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 6.5e-89 330.9 182 83.5
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 6.5e-89 330.9 182 85.2
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 8.4e-89 330.5 180 84.4
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 1.4e-88 329.7 182 84.6
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 2.5e-88 328.9 184 82.1
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 3.2e-88 328.6 182 82.4
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 4.2e-88 328.2 182 84.6
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 4.2e-88 328.2 182 84.1
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 5.5e-88 327.8 182 84.1
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 7.1e-88 327.4 182 83.0
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 7.1e-88 327.4 184 82.1
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 82.4
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 82.4
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 83.0
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.2e-87 326.6 182 83.0
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 1.2e-87 326.6 182 81.9
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 1.2e-87 326.6 182 80.8
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 80.8
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 80.8
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 2.7e-87 325.5 180 83.3
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 81.9
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 2.7e-87 325.5 182 82.4
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 81.9
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 83.0
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 3.5e-87 325.1 182 80.8
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 4.6e-87 324.7 182 84.1
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 6.1e-87 324.3 180 82.2
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 1.0e-86 323.6 182 81.9
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 1.0e-86 323.6 182 81.9
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 1.8e-86 322.8 180 81.7
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 2.3e-86 322.4 182 82.4
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 2.3e-86 322.4 182 79.7
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 182 83.5
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 182 80.8
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 3.9e-86 321.6 182 81.9
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 8.7e-86 320.5 178 83.1
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 8.7e-86 320.5 182 80.2
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 1.5e-85 319.7 182 79.7
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 1.5e-85 319.7 180 80.0
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.9e-85 319.3 182 79.7
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 1.9e-85 319.3 185 77.3
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 2.5e-85 318.9 182 80.2
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 3.3e-85 318.5 182 80.8
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 4.3e-85 318.2 182 79.7
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 5.7e-85 317.8 180 80.6
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 7.4e-85 317.4 182 79.1
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.3e-84 316.6 180 79.4
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 1.3e-84 316.6 182 79.7
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 1.6e-84 316.2 180 79.4
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 80.8
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 78.6
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.2e-84 315.8 182 78.6
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 2.2e-84 315.8 180 80.0
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 2.8e-84 315.5 180 80.0
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 2.8e-84 315.5 180 78.9
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 3.7e-84 315.1 180 78.9
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 4.8e-84 314.7 180 78.3
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 6.3e-84 314.3 174 83.9
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 1.1e-83 313.5 180 78.3
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 1.1e-83 313.5 180 77.8
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 1.1e-83 313.5 180 78.3
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 1.1e-83 313.5 182 80.2
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 1.4e-83 313.2 180 78.3
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.8e-83 312.8 182 78.0
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 77.8
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 77.8
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 2.4e-83 312.4 180 77.8
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 3.1e-83 312.0 180 77.2
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 3.1e-83 312.0 180 77.2
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 3.1e-83 312.0 180 77.2
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 6.9e-83 310.8 180 76.7
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 9.0e-83 310.5 180 76.7
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.2e-82 310.1 182 78.0
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 7.7e-82 307.4 172 81.4
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 3.8e-81 305.1 184 76.1
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 1.9e-80 302.8 182 73.6
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 4.2e-80 301.6 182 76.4
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.8e-78 296.2 181 75.7
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 5.1e-78 294.7 182 73.6
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 5.1e-78 294.7 182 73.6
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.1e-77 293.5 181 76.2
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 1.1e-77 293.5 179 74.3
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 7.4e-77 290.8 179 73.7
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 4.1e-75 285.0 180 73.3
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 9.1e-75 283.9 180 74.4
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 2.0e-74 282.7 180 73.3
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 1.3e-73 280.0 182 70.3
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.7e-73 279.6 173 71.1
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 2.9e-73 278.9 180 71.7
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 6.5e-73 277.7 180 71.1
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 1.1e-72 276.9 180 71.1
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.9e-72 276.2 180 70.6
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 1.9e-72 276.2 180 70.0
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.9e-72 276.2 180 70.6
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 6.5e-65 251.1 180 63.3
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 1.8e-62 243.0 180 56.1
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 3.8e-57 225.3 180 55.6
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.1e-55 219.5 177 54.8
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 3.0e-54 215.7 187 52.9
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.2e-53 213.8 187 50.8
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 2.2e-52 209.5 172 58.1
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 4.1e-51 205.3 175 53.1
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 9.8e-45 184.1 168 51.2
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 3.3e-40 169.1 180 46.1
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 4.4e-37 158.7 88 85.2
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 3.3e-32 142.5 172 42.4
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 1.6e-23 113.6 88 58.0
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 2.8e-23 112.8 154 36.4
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 4.1e-19 99.0 54 83.3
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 3.6e-07 59.3 88 35.2

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (2 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (3 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (2 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (2 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (2 genes)
Medicago truncatula (4 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (4 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (2 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (2 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (2 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (2 genes)

Program Settings