Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.3e-169 599.7 331 100.0
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 2.2e-156 555.8 331 92.4
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.0e-149 532.7 331 86.1
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 4.9e-148 528.1 331 87.9
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 2.0e-141 506.1 271 97.8
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 3.7e-87 325.9 330 57.9
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 4.1e-86 322.4 330 58.2
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 3.4e-85 319.3 330 58.5
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 2.8e-79 299.7 331 56.8
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 1.8e-78 297.0 328 54.9
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 3.1e-78 296.2 361 54.3
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 7.0e-78 295.0 336 53.0
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 1.1e-75 287.7 329 54.4
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 1.5e-75 287.3 330 54.2
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 1.5e-75 287.3 332 56.3
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.1e-74 283.5 330 52.4
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.0e-73 281.2 331 52.6
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 2.3e-73 280.0 331 55.6
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 5.2e-73 278.9 332 51.5
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 8.8e-73 278.1 331 54.7
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.1e-72 277.7 331 54.7
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.1e-72 277.7 330 53.9
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 1.5e-72 277.3 333 53.5
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 1.7e-71 273.9 330 51.8
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.2e-71 273.5 330 53.6
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 2.8e-71 273.1 343 53.4
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 3.7e-71 272.7 329 51.4
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 3.7e-71 272.7 331 51.4
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.7e-71 272.7 399 47.4
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 4.8e-71 272.3 343 53.6
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 8.2e-71 271.6 332 54.5
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 8.2e-71 271.6 331 51.4
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 4.1e-70 269.2 330 51.8
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 5.3e-70 268.9 344 51.2
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 9.1e-70 268.1 331 51.4
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 9.1e-70 268.1 380 47.4
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.2e-69 267.7 332 50.6
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.6e-69 267.3 309 53.7
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 5.9e-69 265.4 329 52.3
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 6.5e-68 261.9 348 50.3
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 8.5e-68 261.5 335 50.4
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 8.5e-68 261.5 307 51.8
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 2.5e-67 260.0 336 53.0
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 3.6e-66 256.1 331 49.5
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 8.0e-66 255.0 332 54.2
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 1.4e-65 254.2 376 45.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.8e-65 253.8 332 49.1
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 2.3e-65 253.4 335 51.9
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 6.8e-65 251.9 332 52.1
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 6.8e-65 251.9 331 53.5
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 6.8e-65 251.9 307 51.5
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 2.0e-64 250.4 334 50.3
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 4.4e-64 249.2 338 49.7
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 5.7e-64 248.8 333 50.2
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 1.7e-63 247.3 347 48.4
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 3.7e-63 246.1 330 50.0
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.3e-63 245.0 330 50.0
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 3.1e-62 243.0 358 45.0
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 2.7e-61 240.0 278 55.0
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 3.5e-61 239.6 334 49.7
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 5.9e-61 238.8 332 49.7
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 5.0e-60 235.7 300 51.3
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.5e-59 234.2 326 51.8
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.9e-59 233.8 334 49.7
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 2.5e-59 233.4 335 48.7
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 4.7e-58 229.2 298 51.7
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.8e-57 227.3 330 47.6
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 4.0e-57 226.1 335 45.7
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 8.8e-57 224.9 338 46.4
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 2.6e-56 223.4 371 44.7
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 3.7e-55 219.5 359 45.1
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 3.7e-55 219.5 275 52.0
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 2.4e-54 216.9 329 45.9
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.5e-51 206.8 281 53.0
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 1.6e-50 204.1 371 41.8
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 4.7e-50 202.6 369 39.8
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 3.4e-48 196.4 229 54.1
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 2.2e-47 193.7 310 43.9
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.2e-47 193.7 294 46.9
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 3.5e-45 186.4 293 45.1
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 4.6e-45 186.0 386 38.9
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 3.0e-44 183.3 351 41.9
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 4.3e-43 179.5 328 40.9
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 4.0e-41 172.9 291 44.7
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 5.2e-41 172.6 377 38.7
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 2.0e-40 170.6 270 44.4
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 4.4e-40 169.5 336 42.9
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 1.3e-39 167.9 304 39.5
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 8.3e-39 165.2 181 56.4
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 4.1e-38 162.9 417 35.3
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 3.5e-37 159.8 419 34.8
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 7.8e-37 158.7 208 48.1
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 1.0e-36 158.3 270 43.7
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 1.0e-36 158.3 270 43.7
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.3e-36 157.9 359 36.8
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 3.0e-36 156.8 261 42.1
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 3.0e-36 156.8 259 40.9
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 8.6e-36 155.2 264 42.4
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 1.5e-35 154.5 261 42.5
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 1.5e-35 154.5 261 42.5
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.5e-35 154.5 161 62.7
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 1.2e-34 151.4 284 41.5
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 1.2e-34 151.4 276 41.3
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 1.6e-34 151.0 261 40.6
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 6.2e-34 149.1 285 41.1
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.4e-33 147.9 381 37.8
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.1e-33 146.7 132 62.9
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 6.8e-33 145.6 231 41.6
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 1.9e-30 137.5 297 36.7
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 4.1e-30 136.3 282 36.9
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 9.2e-30 135.2 158 55.1
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.7e-29 133.7 129 56.6
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 3.0e-28 130.2 208 47.1
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 4.7e-26 122.9 103 70.9
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 8.1e-26 122.1 178 49.4
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 4.0e-25 119.8 273 39.2
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.4e-22 110.5 107 64.5
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 2.4e-22 110.5 107 64.5
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.4e-17 94.0 61 73.8
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 3.4e-16 90.1 144 41.7
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 7.6e-16 89.0 59 71.2
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 7.6e-16 89.0 62 69.4
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 2.2e-15 87.4 117 43.6
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 6.4e-15 85.9 130 43.1
Solyc11g011495.1 Solanum lycopersicum HOM05D006010 ORTHO05D007381 6.0e-13 79.3 52 98.1
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.6e-10 71.2 155 35.5
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.1e-09 67.0 101 42.6
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.1e-09 67.0 101 42.6
Glyma.14G212900 Glycine max HOM05D026408 ORTHO05D029776 3.8e-07 60.1 203 31.5
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 1.9e-06 57.8 72 50.0
VMungo0647G0061 Vigna mungo HOM05D026408 ORTHO05D029776 9.3e-06 55.5 120 35.8

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (2 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (3 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (5 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (3 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (0 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (7 genes)
Glycine max (3 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (1 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (5 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (2 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (5 genes)
Zea mays (1 genes)

Program Settings