Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 0.0e+00 1308.1 671 100.0
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 0.0e+00 1299.6 671 99.1
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 0.0e+00 1152.5 670 88.7
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 0.0e+00 1116.3 649 87.7
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 3.4e-297 1024.6 648 81.5
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 3.6e-291 1004.6 664 80.1
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 3.0e-277 958.4 513 96.5
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 7.3e-276 953.7 669 71.0
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 4.1e-271 937.9 647 70.6
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 5.6e-268 927.5 672 68.6
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 6.2e-267 924.1 672 68.5
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 1.3e-264 916.4 669 67.7
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 8.7e-261 903.7 660 69.2
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 1.1e-260 903.3 669 67.3
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 3.3e-260 901.7 672 67.7
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 4.3e-260 901.4 672 66.1
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.3e-259 899.8 665 67.5
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 4.5e-257 891.3 665 67.1
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 5.8e-257 891.0 669 67.9
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 1.7e-256 889.4 669 65.6
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 2.9e-256 888.6 665 66.3
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 3.8e-256 888.3 669 65.6
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 8.4e-256 887.1 670 67.6
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 4.2e-255 884.8 662 66.2
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 4.2e-255 884.8 660 66.7
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 4.2e-255 884.8 644 68.8
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 7.1e-255 884.0 670 67.2
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 2.7e-254 882.1 665 66.0
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 2.3e-253 879.0 672 65.2
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 3.9e-253 878.2 670 65.1
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 6.7e-253 877.5 656 65.7
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 9.6e-252 873.6 723 61.8
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 2.8e-251 872.1 668 64.4
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 4.8e-251 871.3 665 65.7
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 8.1e-251 870.5 667 66.4
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 9.0e-250 867.1 664 64.6
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 2.0e-249 865.9 660 66.4
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 4.5e-249 864.8 690 62.9
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 7.6e-249 864.0 668 65.4
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 1.3e-248 863.2 665 64.7
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 2.4e-247 859.0 671 65.7
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 4.2e-247 858.2 642 66.4
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 7.9e-246 854.0 668 63.9
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 1.8e-245 852.8 671 63.5
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 1.3e-243 846.7 642 65.0
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 1.6e-243 846.3 663 64.6
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 2.8e-243 845.5 660 66.5
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 6.2e-243 844.3 669 63.4
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 1.8e-242 842.8 738 59.8
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 3.1e-242 842.0 651 64.4
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 4.0e-242 841.6 647 64.1
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 9.0e-242 840.5 677 62.3
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 1.7e-240 836.3 664 64.3
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 1.1e-239 833.6 663 62.0
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 1.1e-239 833.6 685 61.8
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 1.9e-239 832.8 693 61.3
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 3.2e-239 832.0 655 63.1
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 7.1e-239 830.9 665 62.3
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 9.3e-239 830.5 665 62.1
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 4.6e-238 828.2 665 62.6
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 1.3e-237 826.6 670 61.9
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 2.3e-237 825.9 681 62.1
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 6.7e-237 824.3 663 61.5
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 1.1e-236 823.5 631 67.2
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 3.3e-236 822.0 654 63.9
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 1.3e-235 820.1 670 62.1
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 3.1e-234 815.5 671 61.0
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 3.1e-234 815.5 666 62.9
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 9.0e-234 813.9 572 71.0
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 7.6e-233 810.8 634 63.1
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 1.7e-232 809.7 667 60.9
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 5.0e-232 808.1 648 65.0
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 8.5e-232 807.4 668 61.2
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 3.2e-231 805.4 668 61.2
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 2.1e-230 802.7 580 69.0
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 4.6e-230 801.6 721 57.4
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 3.0e-229 798.9 672 60.3
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 3.9e-229 798.5 692 58.5
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 4.8e-227 791.6 638 63.3
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.8e-226 789.6 668 62.1
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 6.9e-226 787.7 740 56.1
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 5.0e-224 781.6 672 59.4
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 1.5e-220 770.0 647 61.2
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.2e-219 766.1 574 67.2
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 1.2e-214 750.4 699 57.1
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 1.0e-213 747.3 704 56.5
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 2.2e-211 739.6 577 64.1
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 7.7e-209 731.1 694 55.9
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 1.0e-208 730.7 557 64.6
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 1.3e-208 730.3 668 57.0
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 1.5e-207 726.9 668 57.0
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 1.8e-205 719.9 651 56.5
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 6.7e-205 718.0 670 54.9
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 3.0e-197 692.6 676 56.1
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 5.2e-197 691.8 665 56.5
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 3.1e-194 682.6 668 54.9
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 5.0e-184 648.7 624 55.4
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 3.7e-179 632.5 494 65.6
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.8e-173 613.6 594 55.4
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 1.1e-162 577.8 664 46.7
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 1.7e-160 570.5 647 47.6
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 1.1e-143 514.6 351 70.7
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 2.2e-139 500.4 679 43.0
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 5.6e-127 459.1 560 45.4
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 2.5e-114 417.2 308 68.2
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 3.9e-96 356.7 648 38.4
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 2.6e-87 327.4 298 56.4
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 7.2e-82 309.3 355 50.7
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 3.5e-76 290.4 659 32.3
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 2.2e-70 271.2 240 60.4
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 3.6e-65 253.8 330 43.9
CARHR162470 Cardamine hirsuta HOM05D002544 ORTHO05D007856 2.8e-49 201.1 179 53.6
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 5.8e-47 193.4 327 35.2
MCO14G034 Micromonas commoda HOM05D002544 ORTHO05D007856 5.1e-43 180.3 750 27.1
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 4.9e-38 163.7 309 32.7
Zm00001eb289130 Zea mays HOM05D002544 ORTHO05D007856 8.4e-30 136.3 113 60.2
Cc07_g13200 Coffea canephora HOM05D002544 ORTHO05D007856 4.2e-29 134.0 103 60.2
CBR_g37928 Chara braunii HOM05D000601 ORTHO05D000301 5.1e-27 127.1 187 41.2
Zm00001eb340210 Zea mays HOM05D002544 ORTHO05D007856 4.0e-24 117.5 110 50.9
CBR_g26304 Chara braunii HOM05D002544 ORTHO05D007856 9.9e-23 112.8 115 53.9
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 1.3e-19 102.4 83 57.8
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 1.6e-17 95.5 102 49.0
HPP92_026942 Vanilla planifolia HOM05D002544 ORTHO05D007856 2.8e-17 94.7 93 51.6
HPP92_021314 Vanilla planifolia HOM05D002544 ORTHO05D007856 6.5e-14 83.6 68 58.8
HPP92_021313 Vanilla planifolia HOM05D002544 ORTHO05D007856 7.9e-12 76.6 65 53.8
FvH4_4g11392 Fragaria vesca HOM05D000005 ORTHO05D000012 3.9e-11 74.3 50 70.0
FAN02G2717 Fragaria x ananassa HOM05D002544 ORTHO05D007856 5.1e-11 73.9 47 74.5
FAN12G0356 Fragaria x ananassa HOM05D002544 ORTHO05D007856 8.7e-11 73.2 64 59.4
CSS0043407 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 1.5e-10 72.4 42 73.8
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 2.5e-10 71.6 62 58.1
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 2.5e-10 71.6 62 58.1
CSS0029470 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D033931 3.3e-10 71.2 42 73.8
FAN02G1722 Fragaria x ananassa HOM05D002544 ORTHO05D007856 9.6e-10 69.7 47 72.3
Gohir.A10G100500 Gossypium hirsutum HOM05D002544 ORTHO05D033931 2.8e-09 68.2 42 76.2
QL02p059474 Quercus lobata HOM05D002544 ORTHO05D007856 1.4e-08 65.9 35 82.9
SGA_v2.0_scaffold17G07933 Striga asiatica HOM05D002544 ORTHO05D399483 5.0e-06 57.4 36 63.9

Acer truncatum (1 genes)
Actinidia chinensis (2 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (2 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (3 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (2 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (3 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (3 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (5 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (5 genes)

Program Settings