Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 0.0e+00 1816.2 929 100.0
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 0.0e+00 1785.4 929 98.6
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 0.0e+00 1760.0 929 97.1
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 0.0e+00 1531.2 946 84.6
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 0.0e+00 1509.6 969 81.9
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 0.0e+00 1192.9 815 78.3
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 2.6e-295 1018.8 674 79.7
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 8.5e-283 977.2 894 58.9
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 5.7e-279 964.5 981 55.5
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 5.7e-279 964.5 960 55.4
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 8.3e-278 960.7 995 55.0
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 7.0e-277 957.6 851 60.0
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 1.6e-273 946.4 993 55.1
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 2.3e-272 942.6 991 54.3
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 1.3e-270 936.8 952 56.6
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.7e-270 936.4 1002 53.3
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 1.8e-269 932.9 992 54.3
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 9.2e-269 930.6 965 54.6
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 3.0e-267 925.6 990 53.6
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 5.0e-267 924.9 992 54.0
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 2.0e-263 912.9 968 55.0
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 2.6e-263 912.5 1057 50.6
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 4.4e-263 911.8 1004 53.2
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 3.7e-262 908.7 918 55.8
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 8.3e-262 907.5 1003 53.1
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 1.1e-261 907.1 979 53.0
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 4.1e-261 905.2 945 55.3
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 4.1e-261 905.2 995 54.0
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 5.4e-261 904.8 970 52.8
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 7.8e-260 901.0 980 52.8
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 3.9e-259 898.7 849 58.5
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 2.9e-254 882.5 981 52.8
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 1.2e-252 877.1 922 55.3
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 5.1e-251 871.7 993 51.4
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 5.1e-251 871.7 966 51.4
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 5.1e-251 871.7 956 52.9
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 7.3e-250 867.8 938 53.5
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 1.6e-249 866.7 955 51.9
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 2.1e-249 866.3 956 53.2
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 4.7e-249 865.1 920 54.7
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 2.6e-247 859.4 855 55.4
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 1.7e-246 856.7 987 51.7
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.7e-246 856.7 851 54.8
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 1.9e-245 853.2 922 52.6
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.2e-244 850.5 868 54.1
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.3e-243 847.0 833 55.6
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 1.3e-243 847.0 871 54.2
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 6.6e-243 844.7 966 51.4
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 1.5e-242 843.6 913 51.5
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 5.6e-242 841.6 936 52.8
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.2e-241 840.5 848 53.9
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 3.6e-241 839.0 965 51.8
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 4.7e-241 838.6 934 51.8
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 5.2e-240 835.1 848 53.7
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 6.8e-240 834.7 931 52.2
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 3.4e-239 832.4 885 53.4
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 1.1e-237 827.4 1004 48.5
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 3.5e-236 822.4 916 51.2
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 1.7e-235 820.1 966 50.3
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 6.6e-235 818.1 957 49.5
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 7.3e-234 814.7 881 52.2
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 2.8e-233 812.8 902 50.7
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 4.8e-233 812.0 934 50.0
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 6.9e-232 808.1 960 49.9
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 6.9e-232 808.1 1001 48.4
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 9.9e-231 804.3 968 48.8
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 1.7e-230 803.5 749 58.3
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 1.2e-228 797.3 915 51.6
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.7e-228 796.2 991 47.9
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 4.6e-228 795.4 893 51.4
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 5.1e-227 792.0 967 50.6
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 2.5e-226 789.6 923 50.3
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 4.3e-226 788.9 951 49.9
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 1.6e-225 786.9 711 60.3
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 1.6e-225 786.9 935 49.4
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 2.8e-225 786.2 917 50.4
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 4.8e-225 785.4 970 48.9
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 1.2e-223 780.8 913 49.0
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 1.5e-223 780.4 924 49.9
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 2.2e-222 776.5 900 50.2
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 4.9e-222 775.4 911 50.3
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 1.9e-221 773.5 830 53.0
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 6.0e-220 768.5 931 49.4
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 3.9e-219 765.8 998 47.0
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 1.5e-218 763.8 920 48.5
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 3.7e-217 759.2 848 51.1
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 3.1e-216 756.1 886 49.5
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 3.1e-216 756.1 926 48.2
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 5.5e-213 745.3 939 47.7
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 2.1e-212 743.4 938 49.6
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 8.2e-209 731.5 874 48.2
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 7.6e-207 724.9 838 50.1
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 3.8e-206 722.6 815 50.6
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 5.9e-199 698.7 1000 45.1
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 3.9e-187 659.4 848 48.0
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 4.5e-183 646.0 689 54.1
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 1.6e-180 637.5 961 41.9
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 1.1e-176 624.8 612 55.7
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 2.5e-173 613.6 657 52.4
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 1.8e-171 607.4 708 50.7
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 7.2e-165 585.5 682 51.5
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 6.6e-158 562.4 1059 37.5
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 4.3e-157 559.7 900 40.0
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 3.7e-153 546.6 917 38.7
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 2.6e-138 497.3 1146 34.6
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 4.4e-138 496.5 871 38.2
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 8.4e-121 439.1 285 81.1
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.5e-114 418.3 476 48.3
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 6.4e-105 386.3 1125 29.9
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 2.6e-90 337.8 369 50.9
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 4.1e-83 313.9 209 83.3
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 6.3e-68 263.5 894 27.9
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 8.6e-49 199.9 375 33.9
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 8.9e-46 189.9 363 34.4
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 2.6e-45 188.3 860 23.4
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 6.6e-33 147.1 365 30.1
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 6.8e-30 137.1 135 52.6
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 4.1e-27 127.9 311 29.9
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 5.2e-22 110.9 387 25.1
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.7e-18 98.6 188 35.6
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 2.8e-15 88.6 87 54.0
COL.COLO4_05996 Corchorus olitorius HOM05D006375 ORTHO05D000012 5.2e-14 84.3 108 46.3
SHI25355 Sapria himalayana HOM05D006375 ORTHO05D000014 6.9e-06 57.4 110 32.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (1 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (2 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (3 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (2 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (4 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (2 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Nicotiana tabacum (2 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (3 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (2 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings