Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g004450 Solanum pennellii HOM05D005855 ORTHO05D006406 0.0e+00 1451.8 834 100.0
Solyc11g008670.2 Solanum lycopersicum HOM05D005855 ORTHO05D006406 0.0e+00 1414.8 834 98.2
PGSC0003DMG400016248 Solanum tuberosum HOM05D005855 ORTHO05D006406 0.0e+00 1346.6 834 93.8
Nitab4.5_0003928g0050 Nicotiana tabacum HOM05D005855 ORTHO05D006406 0.0e+00 1134.8 869 78.4
CAN.G321.5 Capsicum annuum HOM05D005855 ORTHO05D006406 0.0e+00 1120.5 839 81.0
Peaxi162Scf00254g00712 Petunia axillaris HOM05D005855 ORTHO05D006406 0.0e+00 1095.5 846 78.3
Nitab4.5_0001003g0160 Nicotiana tabacum HOM05D005855 ORTHO05D006406 0.0e+00 1092.4 870 74.1
Dinv17130 Davidia involucrata HOM05D005855 ORTHO05D006406 1.6e-219 766.9 821 62.0
Rhsim04G0133000 Rhododendron simsii HOM05D005855 ORTHO05D006406 1.6e-200 703.7 838 56.8
Cc09_g04110 Coffea canephora HOM05D005855 ORTHO05D006406 2.4e-199 699.9 836 57.8
Oeu034710.1 Olea europaea HOM05D005855 ORTHO05D006406 4.0e-199 699.1 847 55.4
TAR633G1091 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.9e-197 693.0 842 56.5
DCAR_031596 Daucus carota HOM05D005855 ORTHO05D006406 2.4e-196 689.9 828 56.0
Actinidia19643 Actinidia chinensis HOM05D005855 ORTHO05D006406 1.2e-195 687.6 827 57.0
QL01p051722 Quercus lobata HOM05D005855 ORTHO05D006406 1.6e-195 687.2 822 56.1
QL01p051691 Quercus lobata HOM05D005855 ORTHO05D006406 2.7e-195 686.4 822 56.1
MSTRG.8191 Avicennia marina HOM05D005855 ORTHO05D006406 7.9e-195 684.9 832 56.6
vmacro08871 Vaccinium macrocarpon HOM05D005855 ORTHO05D006406 1.3e-194 684.1 879 52.2
SGA_v2.0_scaffold340G49313 Striga asiatica HOM05D005855 ORTHO05D006406 5.1e-194 682.2 825 56.4
Migut.F01842 Erythranthe guttata HOM05D005855 ORTHO05D006406 8.7e-194 681.4 833 56.1
Lj8C197T11 Lonicera japonica HOM05D005855 ORTHO05D006406 2.1e-192 676.8 848 55.5
Sabra08G0057900 Salix brachista HOM05D005855 ORTHO05D006406 9.0e-191 671.4 847 56.0
Potri.008G077800 Populus trichocarpa HOM05D005855 ORTHO05D006406 5.8e-190 668.7 844 55.7
MD12G1261700 Malus domestica HOM05D005855 ORTHO05D006406 6.0e-187 658.7 827 53.6
Prupe.6G365000 Prunus persica HOM05D005855 ORTHO05D006406 1.0e-186 657.9 842 53.7
SGA_v2.0_scaffold122G33208 Striga asiatica HOM05D005855 ORTHO05D006406 9.6e-185 651.4 841 53.9
TAR362G1086 Trochodendron aralioides HOM05D005855 ORTHO05D006406 2.1e-184 650.2 816 54.9
MELO3C008612.2 Cucumis melo HOM05D005855 ORTHO05D006406 1.4e-183 647.5 823 53.8
Manes.13G000700 Manihot esculenta HOM05D005855 ORTHO05D006406 3.1e-183 646.4 824 54.2
Gorai.002G148000 Gossypium raimondii HOM05D005855 ORTHO05D006406 5.3e-183 645.6 829 53.8
CANSAT64G2413 Cannabis sativa HOM05D005855 ORTHO05D006406 1.9e-180 637.1 838 54.9
Gohir.A13G090000 Gossypium hirsutum HOM05D005855 ORTHO05D006406 9.3e-180 634.8 825 52.5
Atru.chr2.218 Acer truncatum HOM05D005855 ORTHO05D006406 1.6e-179 634.0 842 54.4
Haze_04608 Corylus avellana HOM05D005855 ORTHO05D006406 2.1e-179 633.6 891 48.7
CiPaw.08G111900 Carya illinoinensis HOM05D005855 ORTHO05D006406 1.0e-178 631.3 823 50.7
CsaV3_2G010280 Cucumis sativus L. HOM05D005855 ORTHO05D006406 1.0e-178 631.3 819 52.6
Gohir.A02G107108 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.8e-178 630.6 848 52.9
RcHm_v2.0_Chr3g0447421 Rosa chinensis HOM05D005855 ORTHO05D006406 1.8e-178 630.6 839 53.3
Duzib177G0112 Durio zibethinus HOM05D005855 ORTHO05D006406 1.1e-177 627.9 843 54.7
FvH4_6g00081 Fragaria vesca HOM05D005855 ORTHO05D006406 3.3e-177 626.3 820 53.4
AUR62000270 Chenopodium quinoa HOM05D005855 ORTHO05D006406 5.7e-177 625.5 816 52.8
FAN14G2818 Fragaria x ananassa HOM05D005855 ORTHO05D006406 9.7e-177 624.8 820 53.4
Ca_08015_v3 Cicer arietinum L. HOM05D005855 ORTHO05D006406 6.3e-176 622.1 807 48.8
ECA232G0592 Erigeron canadensis HOM05D005855 ORTHO05D006406 3.1e-175 619.8 817 51.4
Ciclev10000302m.g Citrus clementina HOM05D005855 ORTHO05D006406 6.9e-175 618.6 818 52.8
HanXRQChr16g0511741 Helianthus annuus HOM05D005855 ORTHO05D006406 1.2e-174 617.8 823 54.1
Glyma.09G248000 Glycine max HOM05D005855 ORTHO05D006406 7.7e-174 615.1 814 50.4
PGR031G3878 Punica granatum HOM05D005855 ORTHO05D006406 2.9e-173 613.2 788 55.3
THA.LOC104822010 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 1.9e-172 610.5 785 47.0
COL.COLO4_22931 Corchorus olitorius HOM05D005855 ORTHO05D006406 5.5e-172 609.0 840 52.0
THA.LOC104805689 Tarenaya hassleriana HOM05D005855 ORTHO05D006406 9.4e-172 608.2 802 51.9
Gohir.D13G093500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 1.6e-171 607.4 828 52.4
FAN02G1917 Fragaria x ananassa HOM05D005855 ORTHO05D006406 2.7e-171 606.7 818 52.1
Hund21931 Selenicereus undatus HOM05D005855 ORTHO05D006406 3.9e-170 602.8 815 50.4
MD00G1017400 Malus domestica HOM05D005855 ORTHO05D006406 6.7e-170 602.1 845 50.8
ClCG11G010010 Citrullus lanatus HOM05D005855 ORTHO05D006406 1.1e-169 601.3 842 51.3
Thhalv10018127m.g Eutrema salsugineum HOM05D005855 ORTHO05D006406 1.1e-169 601.3 808 52.1
Glyma.18G244800 Glycine max HOM05D005855 ORTHO05D006406 4.3e-169 599.4 823 48.5
Sp5g20320 Schrenkiella parvula HOM05D005855 ORTHO05D006406 5.7e-169 599.0 802 52.5
Aa31LG2G2480 Aethionema arabicum HOM05D005855 ORTHO05D006406 9.7e-169 598.2 796 49.6
Lj1g0024601 Lotus japonicus HOM05D005855 ORTHO05D006406 9.7e-169 598.2 808 48.1
Sc16g0010640 Simmondsia chinensis HOM05D005855 ORTHO05D006406 9.7e-169 598.2 779 52.9
Gorai.003G087300 Gossypium raimondii HOM05D005855 ORTHO05D006406 2.8e-168 596.7 844 51.4
Phvul.008G051800 Phaseolus vulgaris HOM05D005855 ORTHO05D006406 3.7e-168 596.3 818 46.8
Gohir.D03G072500 Gossypium hirsutum HOM05D005855 ORTHO05D006406 4.8e-168 595.9 844 51.4
Lalb_Chr03g0038151 Lupinus albus HOM05D005855 ORTHO05D006406 4.8e-168 595.9 812 46.4
Sed0023015 Sechium edule HOM05D005855 ORTHO05D006406 6.3e-168 595.5 819 52.1
TPR.G31229 Trifolium pratense HOM05D005855 ORTHO05D006406 1.1e-167 594.7 814 49.9
Eucgr.B01457 Eucalyptus grandis HOM05D005855 ORTHO05D006406 4.1e-167 592.8 686 59.0
FAN09G4305 Fragaria x ananassa HOM05D005855 ORTHO05D006406 5.3e-167 592.4 845 51.2
Lsat_1_v5_gn_0_14480 Lactuca sativa HOM05D005855 ORTHO05D006406 5.3e-167 592.4 820 52.4
MBI07_g11487_MAGBIO Magnolia biondii HOM05D005855 ORTHO05D006406 1.2e-166 591.3 839 50.4
Thecc.05G112200 Theobroma cacao HOM05D005855 ORTHO05D006406 6.5e-165 585.5 761 55.3
TWI18G0231 Tripterygium wilfordii HOM05D005855 ORTHO05D006406 1.6e-163 580.9 830 48.9
Psat3g103080 Pisum sativum HOM05D005855 ORTHO05D006406 4.7e-163 579.3 832 46.5
Oeu001220.3 Olea europaea HOM05D005855 ORTHO05D006406 3.9e-162 576.2 745 54.8
Ah.04g159310 Amaranthus hybridus HOM05D005855 ORTHO05D006406 1.1e-161 574.7 838 48.4
VMungo1383G1707 Vigna mungo HOM05D005855 ORTHO05D006406 1.1e-161 574.7 819 47.1
Potri.002G209795 Populus trichocarpa HOM05D005855 ORTHO05D006406 1.3e-160 571.2 685 57.2
AT1G65470 Arabidopsis thaliana HOM05D005855 ORTHO05D006406 3.7e-160 569.7 798 51.9
CARHR057120 Cardamine hirsuta HOM05D005855 ORTHO05D006406 8.2e-160 568.5 781 51.3
AUR62006618 Chenopodium quinoa HOM05D005855 ORTHO05D006406 9.1e-159 565.1 805 49.7
Actinidia07922 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.9e-157 560.1 708 56.1
Medtr7g080500 Medicago truncatula HOM05D005855 ORTHO05D006406 2.9e-157 560.1 816 46.0
Aqoxy2G04154 Aquilegia oxysepala HOM05D005855 ORTHO05D006406 3.8e-157 559.7 841 44.1
unitig_749.g13497 Utricularia gibba HOM05D005855 ORTHO05D006406 7.2e-156 555.4 825 49.2
arahy.Tifrunner.gnm1.ann1.VEFL47 Arachis hypogaea HOM05D005855 ORTHO05D006406 9.4e-156 555.1 846 46.7
AL2G22160 Arabidopsis lyrata HOM05D005855 ORTHO05D006406 4.7e-155 552.7 805 51.3
EL10Ac4g10026 Beta vulgaris HOM05D005855 ORTHO05D006406 2.6e-153 547.0 839 47.7
TWI36G1346 Tripterygium wilfordii HOM05D000941 ORTHO05D006406 4.5e-150 536.2 848 47.1
Carub.0002s1120 Capsella rubella HOM05D005855 ORTHO05D006406 5.2e-146 522.7 804 49.1
PSO573G0046 Papaver somniferum HOM05D005855 ORTHO05D006406 2.4e-143 513.8 971 43.2
PSO017G4019 Papaver somniferum HOM05D005855 ORTHO05D006406 5.4e-143 512.7 966 43.3
Lalb_Chr21g0311491 Lupinus albus HOM05D005855 ORTHO05D006406 3.5e-142 510.0 780 45.1
Actinidia31264 Actinidia chinensis HOM05D005855 ORTHO05D006406 2.1e-139 500.7 848 44.9
QL01p051710 Quercus lobata HOM05D005855 ORTHO05D006406 2.7e-139 500.4 495 54.9
A07p32840 Brassica napus HOM05D005855 ORTHO05D006406 3.6e-139 500.0 795 47.2
BraA07t30911Z Brassica rapa HOM05D005855 ORTHO05D006406 6.1e-139 499.2 795 47.0
C06p39070 Brassica napus HOM05D005855 ORTHO05D006406 4.0e-138 496.5 784 47.3
BolC6t38999H Brassica oleracea HOM05D005855 ORTHO05D006406 4.0e-138 496.5 784 47.2
Os01g0896300 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 3.5e-126 456.8 863 43.1
Zm00001eb365740 Zea mays HOM05D005855 ORTHO05D006406 1.7e-125 454.5 867 42.8
Zm00001eb144810 Zea mays HOM05D005855 ORTHO05D006406 6.4e-120 436.0 910 40.2
ATR0743G043 Amborella trichopoda HOM05D005855 ORTHO05D006406 6.0e-118 429.5 847 43.3
HPP92_024393 Vanilla planifolia HOM05D005855 ORTHO05D006406 2.3e-114 417.5 800 45.0
arahy.Tifrunner.gnm1.ann1.65FHJK Arachis hypogaea HOM05D005855 ORTHO05D006406 9.9e-105 385.6 497 47.9
CDE04G3007 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 2.2e-104 384.4 760 44.9
Zm00001eb304780 Zea mays HOM05D005855 ORTHO05D006406 8.7e-93 345.9 818 36.6
SEGI_12971 Sequoiadendron giganteum HOM05D005855 ORTHO05D006406 4.0e-90 337.0 857 37.8
CDE02G2532 Ceratophyllum demersum HOM05D005855 ORTHO05D006406 2.7e-86 324.3 590 48.3
GSVIVG01007185001 Vitis vinifera HOM05D005855 ORTHO05D006406 3.5e-70 270.8 252 57.5
Os07g0273301 Oryza sativa ssp. japonica HOM05D005855 ORTHO05D006406 4.2e-63 247.3 460 37.6
arahy.Tifrunner.gnm1.ann1.8C47BX Arachis hypogaea HOM05D005855 ORTHO05D006406 4.6e-62 243.8 494 37.0
Cpa.g.sc88.1 Carica papaya HOM05D005855 ORTHO05D006406 5.1e-61 240.4 583 32.2
arahy.Tifrunner.gnm1.ann1.F2WWIZ Arachis hypogaea HOM05D005855 ORTHO05D006406 4.3e-60 237.3 492 37.0
Dinv29076 Davidia involucrata HOM05D005855 ORTHO05D006406 2.6e-57 228.0 840 28.6
AagrBONN_evm.TU.Sc2ySwM_344.4907 Anthoceros agrestis HOM05D005855 ORTHO05D006406 8.2e-51 206.5 815 30.2
Mapoly0189s0010 Marchantia polymorpha HOM05D005855 ORTHO05D006406 3.8e-40 171.0 670 33.1
SMO356G0323 Selaginella moellendorffii HOM05D005855 ORTHO05D006406 5.0e-40 170.6 455 33.2
arahy.Tifrunner.gnm1.ann1.X0XBNQ Arachis hypogaea HOM05D005855 ORTHO05D006406 1.4e-37 162.5 197 50.8
Pp3c3_24970 Physcomitrium patens HOM05D005855 ORTHO05D006406 1.5e-36 159.1 374 30.5
Cpa.g.c37190 Carica papaya HOM05D005855 ORTHO05D006406 4.2e-31 141.0 189 45.0
GSVIVG01007186001 Vitis vinifera HOM05D005855 ORTHO05D006406 4.7e-30 137.5 109 60.6
VMungo1383G0582 Vigna mungo HOM05D005855 ORTHO05D000818 6.3e-27 127.1 195 41.5
CBR_g39948 Chara braunii HOM05D005855 ORTHO05D006406 7.0e-26 123.6 184 43.5
TPR.G32502 Trifolium pratense HOM05D005855 ORTHO05D006406 3.6e-22 111.3 125 49.6
Zm00001eb310680 Zea mays HOM05D000012 ORTHO05D006406 3.6e-22 111.3 228 37.3
Zm00001eb367440 Zea mays HOM05D005855 ORTHO05D006406 1.2e-14 86.3 120 45.0
Zm00001eb381860 Zea mays HOM05D000012 ORTHO05D006406 1.4e-13 82.8 98 44.9
Nn8g40536 Nelumbo nucifera HOM05D005855 ORTHO05D006406 1.5e-12 79.3 66 53.0
Lju1609C0G6 Lonicera japonica HOM05D016202 ORTHO05D006406 1.4e-10 72.8 67 62.7
Lju1034A2T22 Lonicera japonica HOM05D016202 ORTHO05D006406 1.8e-10 72.4 73 56.2
Lj9A5T14 Lonicera japonica HOM05D016202 ORTHO05D006406 3.5e-09 68.2 69 56.5
Lju114A5T28 Lonicera japonica HOM05D005855 ORTHO05D006406 1.3e-08 66.2 296 28.4
Lju1609C0T10 Lonicera japonica HOM05D005855 ORTHO05D006406 3.0e-08 65.1 66 59.1
MSTRG.340 Avicennia marina HOM05D005855 ORTHO05D006406 5.0e-08 64.3 116 40.5
Lju170A31T10 Lonicera japonica HOM05D016202 ORTHO05D006406 2.5e-07 62.0 85 47.1
MCO02G251 Micromonas commoda HOM05D005855 ORTHO05D006406 3.3e-07 61.6 534 23.8
Cre12.g550152 Chlamydomonas reinhardtii HOM05D005855 ORTHO05D006406 1.2e-06 59.7 102 41.2
Lj1C955T6 Lonicera japonica HOM05D016202 ORTHO05D006406 2.8e-06 58.5 69 50.7
RcHm_v2.0_Chr5g0011851 Rosa chinensis HOM05D005855 ORTHO05D006406 3.6e-06 58.2 47 57.4

Acer truncatum (1 genes)
Actinidia chinensis (3 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (2 genes)
Beta vulgaris (1 genes)
Brassica carinata (0 genes)
Brassica napus (2 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (2 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (2 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (4 genes)
Gossypium raimondii (2 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (8 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (2 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (1 genes)
Salvia bowleyana (0 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (2 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (2 genes)
Zea mays (6 genes)

Program Settings