Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 6.2e-211 737.3 390 100.0
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 8.2e-195 683.7 392 93.9
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 1.4e-194 682.9 390 93.8
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 8.8e-173 610.5 395 85.1
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.1e-170 601.7 393 84.7
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 3.5e-169 598.6 406 82.0
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 3.0e-165 585.5 372 86.3
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 1.6e-134 483.4 409 67.7
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.8e-133 479.9 398 68.3
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.2e-132 477.2 396 67.9
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 3.4e-132 475.7 406 65.5
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 5.8e-132 474.9 406 66.3
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.7e-131 473.4 409 65.8
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.2e-131 473.0 409 64.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 6.4e-131 471.5 355 71.0
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 8.4e-131 471.1 362 70.4
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 8.4e-131 471.1 360 71.7
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 1.9e-130 469.9 364 70.3
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.4e-130 469.5 411 64.5
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.4e-130 469.5 415 64.8
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 7.1e-130 468.0 411 64.0
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 2.1e-129 466.5 415 64.3
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 7.8e-129 464.5 363 68.6
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 3.0e-128 462.6 406 65.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 3.0e-128 462.6 357 70.3
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 3.3e-127 459.1 410 64.6
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 5.6e-127 458.4 400 65.2
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.2e-126 457.2 403 65.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.2e-126 457.2 413 63.2
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 4.7e-126 455.3 424 62.5
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 8.1e-126 454.5 400 66.5
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 1.1e-125 454.1 401 63.8
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 3.1e-125 452.6 400 64.2
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 6.8e-125 451.4 416 61.8
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 8.9e-125 451.1 408 64.2
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.5e-124 450.3 406 63.1
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.5e-124 450.3 396 63.1
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.4e-124 448.7 425 62.4
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 4.4e-124 448.7 409 62.1
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 5.8e-124 448.4 408 63.0
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 9.9e-124 447.6 401 63.8
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 1.1e-122 444.1 405 64.0
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.4e-122 443.0 365 67.4
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 4.2e-122 442.2 390 65.1
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 5.4e-122 441.8 416 60.8
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.2e-121 440.7 401 61.8
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-121 440.3 433 60.7
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.6e-121 440.3 409 62.6
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 4.6e-121 438.7 424 62.3
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.8e-121 438.0 433 60.3
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.0e-120 437.6 427 60.9
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.3e-120 436.4 398 63.1
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 3.0e-120 436.0 400 61.5
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 3.9e-120 435.6 335 70.7
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 8.7e-120 434.5 395 62.5
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 4.3e-119 432.2 433 59.4
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 4.3e-119 432.2 425 59.3
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 5.6e-119 431.8 429 59.4
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 9.6e-119 431.0 413 61.3
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.3e-118 430.6 398 62.8
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 1.3e-118 430.6 424 59.9
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 2.4e-117 426.4 435 58.6
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.4e-117 426.4 440 57.3
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 3.1e-117 426.0 402 61.2
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 4.0e-117 425.6 403 61.3
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 9.0e-117 424.5 422 59.2
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 1.5e-116 423.7 422 60.4
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 3.4e-116 422.5 401 61.1
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 3.4e-116 422.5 416 59.4
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.4e-116 422.2 406 60.6
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 7.6e-116 421.4 412 59.7
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 9.9e-116 421.0 398 61.3
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 1.3e-115 420.6 341 68.0
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 6.4e-115 418.3 523 51.2
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 2.4e-114 416.4 407 60.7
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 3.2e-114 416.0 426 56.8
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.2e-114 416.0 438 58.2
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 7.1e-114 414.8 429 57.3
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 2.7e-113 412.9 432 58.1
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 2.7e-113 412.9 440 57.7
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.5e-113 412.5 438 58.0
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 6.0e-113 411.8 438 58.0
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 3.0e-112 409.5 425 56.9
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 6.6e-112 408.3 350 66.0
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.1e-111 407.5 432 54.9
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.5e-111 407.1 430 56.0
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 1.9e-111 406.8 423 57.7
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 3.3e-111 406.0 428 57.0
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 4.3e-111 405.6 405 60.0
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.6e-108 396.4 429 55.9
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.9e-106 390.2 401 59.4
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.6e-105 387.1 400 57.2
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 6.0e-105 385.2 410 57.3
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 1.1e-103 380.9 379 57.3
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 8.1e-102 374.8 426 54.0
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.1e-101 374.4 426 54.0
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 5.5e-98 362.1 429 52.4
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.1e-95 354.4 328 61.3
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.1e-94 350.1 366 56.6
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 2.2e-91 340.1 338 54.7
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 6.7e-88 328.6 320 61.9
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 1.3e-86 324.3 305 62.0
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.3e-83 314.3 271 64.2
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.8e-78 296.6 260 58.1
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 3.7e-78 296.2 398 47.2
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 8.5e-75 285.0 312 56.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.4e-72 277.7 325 50.2
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 2.3e-72 276.9 408 43.6
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.7e-67 260.8 295 50.8
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 1.2e-65 254.6 204 69.6
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.0e-56 224.9 392 38.8
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 8.3e-46 188.7 134 73.1
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 4.1e-45 186.4 143 69.2
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.5e-42 177.2 196 52.6
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.0e-32 143.3 88 76.1
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 2.0e-23 114.4 320 28.1
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 9.5e-18 95.5 86 60.5
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 7.6e-15 85.9 145 50.3
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 4.1e-13 80.1 233 30.5
PGSC0003DMG400028082 Solanum tuberosum HOM05D006391 ORTHO05D007767 9.2e-13 79.0 50 86.0
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 5.1e-11 73.2 66 53.0
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 5.1e-11 73.2 319 24.5
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.5e-10 71.6 46 67.4
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 2.5e-10 70.9 46 65.2
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 7.6e-07 59.3 118 40.7

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (2 genes)
Avicennia marina (0 genes)
Beta vulgaris (1 genes)
Brassica carinata (4 genes)
Brassica napus (2 genes)
Brassica oleracea (3 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (3 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (6 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (1 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (3 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (2 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Tripterygium wilfordii (1 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (3 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings