Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g001140 Solanum pennellii HOM05D004670 ORTHO05D008020 1.5e-280 969.1 590 100.0
Solyc11g005140.1 Solanum lycopersicum HOM05D004670 ORTHO05D008020 7.6e-277 956.8 590 98.6
PGSC0003DMG400006026 Solanum tuberosum HOM05D004670 ORTHO05D008020 2.0e-253 879.0 596 92.8
Nitab4.5_0008751g0030 Nicotiana tabacum HOM05D004670 ORTHO05D008020 7.0e-206 721.1 606 79.4
Nitab4.5_0001348g0230 Nicotiana tabacum HOM05D004670 ORTHO05D008020 3.2e-198 695.7 606 76.9
CAN.G716.1 Capsicum annuum HOM05D004670 ORTHO05D008020 4.6e-197 691.8 622 77.2
Peaxi162Scf00066g00021 Petunia axillaris HOM05D004670 ORTHO05D008020 4.9e-183 645.2 603 74.6
QL10p048429 Quercus lobata HOM05D004670 ORTHO05D008020 7.4e-123 445.3 610 58.9
Cfa014310 Carpinus fangiana HOM05D004670 ORTHO05D008020 7.2e-118 428.7 605 57.4
CiPaw.07G084800 Carya illinoinensis HOM05D004670 ORTHO05D008020 3.0e-116 423.3 639 56.5
Dinv17145 Davidia involucrata HOM05D004670 ORTHO05D008020 6.7e-116 422.2 521 62.8
CSS0027504 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 2.2e-114 417.2 557 59.4
CSS0030730 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 2.2e-114 417.2 557 59.4
TAR362G1162 Trochodendron aralioides HOM05D004670 ORTHO05D008020 1.2e-112 411.4 562 57.7
Gohir.D13G219500 Gossypium hirsutum HOM05D004670 ORTHO05D008020 7.7e-112 408.7 533 59.7
Oeu040399.1 Olea europaea HOM05D004670 ORTHO05D008020 1.3e-111 407.9 653 53.4
TWI18G1064 Tripterygium wilfordii HOM05D004670 ORTHO05D008020 1.1e-110 404.8 484 61.8
Haze_12758 Corylus avellana HOM05D004670 ORTHO05D008020 1.5e-110 404.4 581 57.3
Lj8P583T10 Lonicera japonica HOM05D004670 ORTHO05D008020 1.5e-110 404.4 496 62.9
Haze_20607 Corylus avellana HOM05D004670 ORTHO05D008020 1.9e-110 404.1 589 55.3
Rhsim05G0163600 Rhododendron simsii HOM05D004670 ORTHO05D008020 7.2e-110 402.1 538 59.3
Sed0002677 Sechium edule HOM05D004670 ORTHO05D008020 7.2e-110 402.1 558 57.0
MELO3C008575.2 Cucumis melo HOM05D004670 ORTHO05D008020 1.2e-109 401.4 608 54.4
Atru.chr2.211 Acer truncatum HOM05D004670 ORTHO05D008020 1.6e-109 401.0 569 58.3
Aqoxy3G03703 Aquilegia oxysepala HOM05D004670 ORTHO05D008020 4.7e-109 399.4 469 61.4
Thecc.06G195000 Theobroma cacao HOM05D004670 ORTHO05D008020 2.3e-108 397.1 550 58.7
MD00G1017000 Malus domestica HOM05D004670 ORTHO05D008020 8.2e-106 388.7 596 55.4
COL.COLO4_09284 Corchorus olitorius HOM05D004670 ORTHO05D008020 2.4e-105 387.1 533 59.5
Duzib150G0183 Durio zibethinus HOM05D004670 ORTHO05D008020 2.4e-105 387.1 597 54.1
EL10Ac4g10032 Beta vulgaris HOM05D004670 ORTHO05D008020 7.0e-105 385.6 534 57.5
Gohir.A13G215800 Gossypium hirsutum HOM05D004670 ORTHO05D008020 4.5e-104 382.9 539 57.7
Gorai.013G250400 Gossypium raimondii HOM05D004670 ORTHO05D008020 4.5e-104 382.9 539 57.7
SGA_v2.0_scaffold52G18920 Striga asiatica HOM05D004670 ORTHO05D008020 1.3e-103 381.3 506 44.9
CANSAT54G2504 Cannabis sativa HOM05D004670 ORTHO05D008020 5.0e-103 379.4 592 56.6
MBI07_g36706_MAGBIO Magnolia biondii HOM05D004670 ORTHO05D008020 6.5e-103 379.0 474 61.8
Sc16g0010690 Simmondsia chinensis HOM05D004670 ORTHO05D008020 8.5e-103 378.6 603 52.9
MSTRG.25359 Avicennia marina HOM05D004670 ORTHO05D008020 9.4e-102 375.2 596 54.2
Ciclev10004046m.g Citrus clementina HOM05D004670 ORTHO05D008020 1.2e-101 374.8 586 54.6
Migut.C01066 Erythranthe guttata HOM05D004670 ORTHO05D008020 2.7e-101 373.6 608 52.1
AUR62025405 Chenopodium quinoa HOM05D004670 ORTHO05D008020 3.0e-100 370.2 541 56.0
Manes.13G000200 Manihot esculenta HOM05D004670 ORTHO05D008020 3.0e-100 370.2 455 60.2
EL10Ac7g17697 Beta vulgaris HOM05D004670 ORTHO05D008020 8.8e-100 368.6 616 51.0
SalBow7G4343 Salvia bowleyana HOM05D004670 ORTHO05D008020 8.8e-100 368.6 440 47.7
Phvul.008G212400 Phaseolus vulgaris HOM05D004670 ORTHO05D008020 2.0e-99 367.5 498 58.6
Sabra16G0238400 Salix brachista HOM05D004670 ORTHO05D008020 4.4e-99 366.3 591 52.6
SalBow7G3652 Salvia bowleyana HOM05D004670 ORTHO05D008020 4.4e-99 366.3 440 47.5
Prupe.6G365500 Prunus persica HOM05D004670 ORTHO05D008020 9.8e-99 365.2 483 61.9
CsaV3_2G010440 Cucumis sativus L. HOM05D004670 ORTHO05D008020 2.2e-98 364.0 606 52.1
Potri.001G361500 Populus trichocarpa HOM05D004670 ORTHO05D008020 8.3e-98 362.1 600 53.2
Glyma.15G017400 Glycine max HOM05D004670 ORTHO05D008020 5.4e-97 359.4 497 59.0
AUR62008838 Chenopodium quinoa HOM05D004670 ORTHO05D008020 7.0e-97 359.0 563 54.5
Ca_16311_v3 Cicer arietinum L. HOM05D004670 ORTHO05D008020 1.2e-96 358.2 547 50.6
Lsat_1_v5_gn_7_7580 Lactuca sativa HOM05D004670 ORTHO05D008020 2.7e-96 357.1 613 50.6
QL10p044086 Quercus lobata HOM05D004670 ORTHO05D008020 1.0e-95 355.1 344 58.4
VMungo0647G0492 Vigna mungo HOM05D004670 ORTHO05D008020 1.0e-95 355.1 469 60.6
DCAR_024376 Daucus carota HOM05D004670 ORTHO05D008020 1.3e-95 354.8 590 53.1
Ah.06g195210 Amaranthus hybridus HOM05D004670 ORTHO05D008020 2.9e-95 353.6 609 48.6
HanXRQChr16g0532601 Helianthus annuus HOM05D004670 ORTHO05D008020 3.8e-95 353.2 618 51.6
Cc10_g12810 Coffea canephora HOM05D004670 ORTHO05D008020 6.5e-95 352.4 658 50.3
Eucgr.B01443 Eucalyptus grandis HOM05D004670 ORTHO05D008020 7.2e-94 349.0 464 60.1
Glyma.13G356700 Glycine max HOM05D004670 ORTHO05D008020 9.5e-94 348.6 502 57.0
Eucgr.L01231 Eucalyptus grandis HOM05D004670 ORTHO05D008020 8.0e-93 345.5 464 59.9
ECA236G4653 Erigeron canadensis HOM05D004670 ORTHO05D008020 1.0e-92 345.1 503 57.7
Nn1g09528 Nelumbo nucifera HOM05D004670 ORTHO05D008020 6.8e-92 342.4 385 50.9
ECA246G0724 Erigeron canadensis HOM05D004670 ORTHO05D008020 1.5e-91 341.3 514 57.4
HanXRQChr02g0056371 Helianthus annuus HOM05D004670 ORTHO05D008020 2.6e-91 340.5 610 50.8
Psat5g107920 Pisum sativum HOM05D004670 ORTHO05D008020 6.3e-90 335.9 522 52.7
PGR119G2020 Punica granatum HOM05D004670 ORTHO05D008020 9.2e-89 332.0 476 58.8
arahy.Tifrunner.gnm1.ann1.H9JUXY Arachis hypogaea HOM05D004670 ORTHO05D008020 1.1e-86 325.1 475 56.8
ATR0743G160 Amborella trichopoda HOM05D004670 ORTHO05D008020 7.3e-86 322.4 485 55.7
RcHm_v2.0_Chr2g0131651 Rosa chinensis HOM05D004670 ORTHO05D008020 2.3e-84 317.4 602 50.2
TPR.G23340 Trifolium pratense HOM05D004670 ORTHO05D008020 4.0e-84 316.6 547 53.4
PSO017G2252 Papaver somniferum HOM05D004670 ORTHO05D008020 1.3e-82 311.6 597 49.2
CDE06G0776 Ceratophyllum demersum HOM05D004670 ORTHO05D008020 9.2e-81 305.4 462 40.5
FAN14G3835 Fragaria x ananassa HOM05D004670 ORTHO05D008020 1.3e-79 301.6 611 48.4
HPP92_012838 Vanilla planifolia HOM05D004670 ORTHO05D008020 6.6e-79 299.3 507 51.3
FvH4_6g27990 Fragaria vesca HOM05D004670 ORTHO05D008020 1.1e-78 298.5 599 48.4
SHI13694 Sapria himalayana HOM05D004670 ORTHO05D008020 2.8e-77 293.9 470 54.5
AUR62044648 Chenopodium quinoa HOM05D004670 ORTHO05D008020 3.1e-76 290.4 387 45.5
Thhalv10020352m.g Eutrema salsugineum HOM05D004670 ORTHO05D008020 3.1e-76 290.4 566 47.0
PSO675G7837 Papaver somniferum HOM05D004670 ORTHO05D008020 3.1e-76 290.4 598 47.8
Lalb_Chr13g0290441 Lupinus albus HOM05D004670 ORTHO05D008020 1.2e-75 288.5 569 44.1
Medtr3g081310 Medicago truncatula HOM05D004670 ORTHO05D008020 7.5e-75 285.8 535 49.3
BolC1t05888H Brassica oleracea HOM05D004670 ORTHO05D008020 6.4e-74 282.7 570 48.4
THA.LOC104827168 Tarenaya hassleriana HOM05D004670 ORTHO05D008020 1.2e-72 278.5 602 47.3
Lj2g0025819 Lotus japonicus HOM05D004670 ORTHO05D008020 2.0e-72 277.7 533 51.6
A03p33060 Brassica napus HOM05D004670 ORTHO05D008020 6.0e-72 276.2 595 46.7
THA.LOC104802429 Tarenaya hassleriana HOM05D004670 ORTHO05D008020 1.0e-71 275.4 614 46.7
BraA03t12476Z Brassica rapa HOM05D004670 ORTHO05D008020 2.3e-71 274.2 595 46.6
Cpa.g.sc127.45 Carica papaya HOM05D004670 ORTHO05D008020 1.1e-68 265.4 500 53.2
AL3G12030 Arabidopsis lyrata HOM05D004670 ORTHO05D008020 3.4e-67 260.4 592 46.5
AT3G02650 Arabidopsis thaliana HOM05D004670 ORTHO05D008020 3.4e-67 260.4 585 46.7
BcaC01g04430 Brassica carinata HOM05D004670 ORTHO05D008020 3.4e-67 260.4 586 46.8
BolC3t16289H Brassica oleracea HOM05D004670 ORTHO05D008020 3.4e-67 260.4 586 46.8
Carub.0003s0177 Capsella rubella HOM05D004670 ORTHO05D008020 3.4e-67 260.4 610 45.6
BNapus_Darmor_BZH_scaffold_99p00180 Brassica napus HOM05D004670 ORTHO05D008020 1.3e-66 258.5 576 47.0
Sp3g01690 Schrenkiella parvula HOM05D004670 ORTHO05D008020 3.2e-65 253.8 593 45.9
CARHR076670 Cardamine hirsuta HOM05D004670 ORTHO05D008020 5.4e-65 253.1 577 46.8
BraSC246t45824Z Brassica rapa HOM05D004670 ORTHO05D008020 1.2e-64 251.9 574 46.0
C03p40240 Brassica napus HOM05D004670 ORTHO05D008020 4.6e-64 250.0 407 41.3
TPR.G9216 Trifolium pratense HOM05D004670 ORTHO05D008020 5.6e-62 243.0 496 34.3
BcaB04g19393 Brassica carinata HOM05D004670 ORTHO05D008020 4.7e-61 240.0 608 44.9
BNapus_Darmor_BZH_scaffold_122p00150 Brassica napus HOM05D004670 ORTHO05D008020 3.1e-60 237.3 411 38.9
AUR62000265 Chenopodium quinoa HOM05D004670 ORTHO05D008020 5.2e-60 236.5 515 34.4
Lj6g0018960 Lotus japonicus HOM05D004670 ORTHO05D008020 8.9e-60 235.7 530 48.3
Zm00001eb144640 Zea mays HOM05D004670 ORTHO05D008020 8.7e-55 219.2 573 42.6
Dinv17144 Davidia involucrata HOM05D004670 ORTHO05D008020 2.4e-52 211.1 235 48.1
CSS0025547 Camellia sinensis var. sinensis HOM05D004670 ORTHO05D008020 8.4e-50 202.6 310 42.6
Thecc.09G224400 Theobroma cacao HOM05D004670 ORTHO05D008020 8.4e-50 202.6 441 45.1
PGR119G2157 Punica granatum HOM05D004670 ORTHO05D008020 1.1e-49 202.2 439 33.3
SEGI_06910 Sequoiadendron giganteum HOM05D004670 ORTHO05D008020 5.1e-39 166.8 489 41.3
Cpa.g.sc35.62 Carica papaya HOM05D004670 ORTHO05D022223 4.0e-36 157.1 165 51.5
AUR62008837 Chenopodium quinoa HOM05D004670 ORTHO05D008020 2.4e-33 147.9 375 31.7
AUR62006613 Chenopodium quinoa HOM05D004670 ORTHO05D008020 1.6e-32 145.2 360 30.6
TPR.G17089 Trifolium pratense HOM05D004670 ORTHO05D014137 1.3e-29 135.6 318 34.3
Medtr5g092030 Medicago truncatula HOM05D004670 ORTHO05D014137 1.4e-25 122.1 317 30.9
TPR.G5228 Trifolium pratense HOM05D002798 ORTHO05D003052 5.1e-23 113.6 304 31.6
Medtr5g088900 Medicago truncatula HOM05D004670 ORTHO05D014137 1.1e-20 105.9 299 29.8
VMungo1080G1842 Vigna mungo HOM05D004670 ORTHO05D014137 9.0e-20 102.8 72 69.4
AUR62044649 Chenopodium quinoa HOM05D004670 ORTHO05D008020 2.0e-19 101.7 66 71.2
Medtr8g105355 Medicago truncatula HOM05D004670 ORTHO05D014137 1.6e-16 92.0 159 38.4
Medtr8g105450 Medicago truncatula HOM05D004670 ORTHO05D014137 1.6e-16 92.0 159 38.4
TPR.G25089 Trifolium pratense HOM05D004670 ORTHO05D014137 3.0e-15 87.8 174 32.8
VMungo1215G2433 Vigna mungo HOM05D004670 ORTHO05D014137 3.9e-15 87.4 72 63.9
Cpa.g.c31883 Carica papaya HOM05D004670 ORTHO05D022223 6.7e-15 86.7 110 45.5
Os01g0897500 Oryza sativa ssp. japonica HOM05D004670 ORTHO05D008020 1.1e-14 85.9 62 64.5
TPR.G5188 Trifolium pratense HOM05D004670 ORTHO05D008020 7.4e-14 83.2 207 31.4
Peaxi162Scf00301g00516 Petunia axillaris HOM05D030372 ORTHO05D025854 9.1e-12 76.3 220 32.3
Peaxi162Scf00301g00517 Petunia axillaris HOM05D030372 ORTHO05D025854 9.1e-12 76.3 220 32.3
Peaxi162Scf00301g00518 Petunia axillaris HOM05D030372 ORTHO05D025854 9.1e-12 76.3 220 32.3
Medtr1g102600 Medicago truncatula HOM05D004670 ORTHO05D266903 7.7e-11 73.2 135 33.3
Cpa.g.sc209.39 Carica papaya HOM05D004670 ORTHO05D022223 2.2e-10 71.6 106 38.7
Thecc.05G264500 Theobroma cacao HOM05D007661 ORTHO05D009671 5.0e-10 70.5 173 28.3
TWI74G0317 Tripterygium wilfordii HOM05D006596 ORTHO05D008497 1.1e-09 69.3 248 25.8
Medtr5g095780 Medicago truncatula HOM05D004670 ORTHO05D008020 3.2e-09 67.8 66 47.0
Cpa.g.sc15.139 Carica papaya HOM05D004670 ORTHO05D022223 4.2e-09 67.4 163 30.7
Gorai.013G189200 Gossypium raimondii HOM05D007661 ORTHO05D009671 7.2e-09 66.6 173 27.7
Gorai.013G189900 Gossypium raimondii HOM05D007661 ORTHO05D009671 7.2e-09 66.6 173 27.7
Oeu039630.1 Olea europaea HOM05D004670 ORTHO05D025854 7.2e-09 66.6 55 67.3
Gohir.A11G054800 Gossypium hirsutum HOM05D007661 ORTHO05D009671 1.6e-08 65.5 173 27.2
Gohir.D13G171600 Gossypium hirsutum HOM05D007661 ORTHO05D009671 2.7e-08 64.7 173 27.2
TPR.G10813 Trifolium pratense HOM05D004670 ORTHO05D008020 2.7e-08 64.7 60 46.7
Ca_09603_v3 Cicer arietinum L. HOM05D004670 ORTHO05D014137 1.0e-07 62.8 172 29.7
Gohir.D13G171200 Gossypium hirsutum HOM05D007661 ORTHO05D009671 1.0e-07 62.8 173 26.6
VMungo0251G1276 Vigna mungo HOM05D007661 ORTHO05D009671 2.3e-07 61.6 150 25.3
MSTRG.10608 Avicennia marina HOM05D000424 ORTHO05D000355 5.1e-07 60.5 248 25.4
QL11p020645 Quercus lobata HOM05D007661 ORTHO05D009671 8.8e-07 59.7 176 25.6
Phvul.002G208300 Phaseolus vulgaris HOM05D007661 ORTHO05D009671 5.7e-06 57.0 150 24.7
SalBow5G1594 Salvia bowleyana HOM05D000424 ORTHO05D000355 9.7e-06 56.2 183 24.6

Acer truncatum (1 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (1 genes)
Avicennia marina (2 genes)
Beta vulgaris (2 genes)
Brassica carinata (2 genes)
Brassica napus (4 genes)
Brassica oleracea (2 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (5 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (0 genes)
Chenopodium quinoa (7 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (2 genes)
Durio zibethinus (1 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (2 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (2 genes)
Gossypium hirsutum (5 genes)
Gossypium raimondii (3 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (1 genes)
Lotus japonicus (2 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (1 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (7 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (2 genes)
Petunia axillaris (4 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (0 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (2 genes)
Quercus lobata (3 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (1 genes)
Salix brachista (1 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (3 genes)
Trifolium pratense (7 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (0 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (1 genes)
Vigna mungo (4 genes)
Vitis vinifera (0 genes)
Zea mays (1 genes)

Program Settings