Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035980.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 4.3e-33 144.1 72 100.0
CAN.G1298.13 Capsicum annuum HOM05D000445 ORTHO05D000314 1.7e-21 105.5 59 88.1
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 6.5e-21 103.6 59 86.4
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 2.5e-20 101.7 59 84.7
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-20 99.8 59 83.1
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 9.3e-20 99.8 59 83.1
Solyc03g078010.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.6e-19 99.0 56 85.7
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 2.1e-19 98.6 59 81.4
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 2.1e-19 98.6 59 83.1
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-19 97.8 58 82.8
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-19 97.8 58 82.8
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 3.5e-19 97.8 58 82.8
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 3.5e-19 97.8 58 82.8
Nitab4.5_0007104g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 3.5e-19 97.8 59 83.1
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 3.5e-19 97.8 59 81.4
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 3.5e-19 97.8 59 81.4
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 6.1e-19 97.1 59 81.4
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 6.1e-19 97.1 59 81.4
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 7.9e-19 96.7 59 79.7
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 7.9e-19 96.7 59 79.7
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 7.9e-19 96.7 59 79.7
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.0e-18 96.3 59 81.4
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.3e-18 95.9 58 82.8
RcHm_v2.0_Chr2g0118451 Rosa chinensis HOM05D000445 ORTHO05D000314 1.8e-18 95.5 59 81.4
Lj2C1239G59 Lonicera japonica HOM05D000445 ORTHO05D000314 2.3e-18 95.1 60 83.3
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 3.0e-18 94.7 59 83.1
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 5.1e-18 94.0 53 86.8
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 6.7e-18 93.6 58 79.3
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 6.7e-18 93.6 58 82.8
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 8.7e-18 93.2 59 78.0
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 8.7e-18 93.2 59 83.1
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.5e-17 92.4 60 76.7
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 1.5e-17 92.4 59 79.7
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.3e-17 91.3 59 81.4
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.3e-17 91.3 59 81.4
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.3e-17 91.3 58 75.9
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 3.3e-17 91.3 58 75.9
HanXRQChr00c0349g0573981 Helianthus annuus HOM05D000445 ORTHO05D000314 7.4e-17 90.1 60 76.7
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 7.4e-17 90.1 59 76.3
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 7.4e-17 90.1 59 76.3
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 7.4e-17 90.1 59 76.3
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 64 71.9
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-17 89.7 59 76.3
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.3e-16 89.4 59 79.7
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.3e-16 89.4 59 79.7
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 2.2e-16 88.6 59 76.3
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 2.8e-16 88.2 59 78.0
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 2.8e-16 88.2 59 74.6
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 2.8e-16 88.2 59 74.6
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.7e-16 87.8 79 63.3
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 6.3e-16 87.0 61 77.0
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 6.3e-16 87.0 61 77.0
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 6.3e-16 87.0 61 77.0
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 8.2e-16 86.7 61 77.0
Solyc12g035780.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.1e-15 86.3 58 75.9
Nitab4.5_0000011g0360 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.4e-15 85.9 59 74.6
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 1.8e-15 85.5 59 78.0
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 2.4e-15 85.1 61 75.4
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 2.4e-15 85.1 61 75.4
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 2.4e-15 85.1 61 75.4
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 2.4e-15 85.1 61 75.4
BolSC29t60617H Brassica oleracea HOM05D000445 ORTHO05D000314 2.4e-15 85.1 61 75.4
BolSC47t61073H Brassica oleracea HOM05D000445 ORTHO05D000314 2.4e-15 85.1 61 75.4
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 2.4e-15 85.1 60 73.3
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 2.4e-15 85.1 60 73.3
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 2.4e-15 85.1 60 73.3
Nitab4.5_0003101g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.3e-15 84.0 48 83.3
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 1.2e-14 82.8 60 71.7
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 5.9e-14 80.5 61 73.8
Lju5009C0G1 Lonicera japonica HOM05D000445 ORTHO05D000314 1.7e-13 79.0 55 76.4
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 3.8e-13 77.8 88 53.4
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 6.5e-13 77.0 69 63.8
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.4e-12 75.9 61 72.1
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 1.4e-12 75.9 61 72.1
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 1.4e-12 75.9 61 72.1
Nitab4.5_0009685g0030 Nicotiana tabacum HOM05D003033 ORTHO05D003475 3.2e-12 74.7 47 76.6
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 5.5e-12 73.9 53 71.7
Nitab4.5_0001761g0320 Nicotiana tabacum HOM05D000445 ORTHO05D000314 7.2e-12 73.6 41 85.4
Nn020s41481 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.0e-10 69.7 47 78.7
CAN.G1738.15 Capsicum annuum HOM05D000445 ORTHO05D000314 3.0e-10 68.2 37 86.5
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 3.0e-10 68.2 45 77.8
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 1.5e-09 65.9 71 54.9
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 7.4e-09 63.5 62 59.7
Nitab4.5_0023562g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.7e-09 63.2 44 70.5
Nitab4.5_0000496g0040 Nicotiana tabacum HOM05D000580 ORTHO05D001785 2.4e-07 58.5 40 70.0
CAN.G8.28 Capsicum annuum HOM05D000445 ORTHO05D000314 6.9e-07 57.0 29 86.2
Solyc04g050850.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-06 55.1 32 87.5
Solyc09g031820.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 3.4e-06 54.7 32 87.5
Solyc02g011940.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.9e-06 53.9 32 84.4
Solyc03g120370.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.7e-06 53.5 32 84.4

Acer truncatum (0 genes)
Actinidia chinensis (0 genes)
Aethionema arabicum (0 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (4 genes)
Avicennia marina (0 genes)
Beta vulgaris (0 genes)
Brassica carinata (1 genes)
Brassica napus (1 genes)
Brassica oleracea (4 genes)
Brassica rapa (3 genes)
Camellia sinensis var. sinensis (0 genes)
Cannabis sativa (0 genes)
Capsella rubella (0 genes)
Capsicum annuum (5 genes)
Cardamine hirsuta (1 genes)
Carica papaya (0 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (0 genes)
Ceratophyllum demersum (0 genes)
Chara braunii (0 genes)
Chenopodium quinoa (0 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (0 genes)
Citrullus lanatus (0 genes)
Citrus clementina (0 genes)
Coffea canephora (0 genes)
Corchorus olitorius (0 genes)
Corylus avellana (0 genes)
Cucumis melo (0 genes)
Cucumis sativus L. (1 genes)
Daucus carota (0 genes)
Davidia involucrata (0 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (0 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (0 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (0 genes)
Fragaria x ananassa (0 genes)
Glycine max (0 genes)
Gossypium hirsutum (1 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (18 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (3 genes)
Lonicera japonica (3 genes)
Lotus japonicus (5 genes)
Lupinus albus (1 genes)
Magnolia biondii (0 genes)
Malus domestica (0 genes)
Manihot esculenta (0 genes)
Marchantia polymorpha (0 genes)
Medicago truncatula (0 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (3 genes)
Nicotiana tabacum (9 genes)
Olea europaea (0 genes)
Oryza sativa ssp. japonica (0 genes)
Papaver somniferum (2 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (0 genes)
Physcomitrium patens (0 genes)
Pisum sativum (0 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (0 genes)
Punica granatum (2 genes)
Quercus lobata (0 genes)
Rhododendron simsii (0 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (0 genes)
Schrenkiella parvula (0 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (0 genes)
Sequoiadendron giganteum (0 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (13 genes)
Solanum pennellii (0 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (0 genes)
Theobroma cacao (0 genes)
Trifolium pratense (0 genes)
Tripterygium wilfordii (0 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (3 genes)
Vaccinium macrocarpon (0 genes)
Vanilla planifolia (0 genes)
Vigna mungo (2 genes)
Vitis vinifera (0 genes)
Zea mays (0 genes)

Program Settings