Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g072400.3 Solanum lycopersicum HOM05D005177 ORTHO05D006175 4.5e-236 820.8 412 100.0
Sopen11g030050 Solanum pennellii HOM05D005177 ORTHO05D006175 5.9e-228 793.9 412 97.3
PGSC0003DMG400027405 Solanum tuberosum HOM05D005177 ORTHO05D006175 2.2e-222 775.4 412 94.4
Nitab4.5_0002129g0070 Nicotiana tabacum HOM05D005177 ORTHO05D006175 2.3e-179 632.5 404 80.9
CAN.G553.3 Capsicum annuum HOM05D005177 ORTHO05D006175 5.5e-157 558.1 307 87.9
Nitab4.5_0001802g0050 Nicotiana tabacum HOM05D005177 ORTHO05D006175 6.7e-155 551.2 364 78.6
Peaxi162Scf00389g00939 Petunia axillaris HOM05D005177 ORTHO05D006175 5.7e-154 548.1 416 71.9
Dinv32787 Davidia involucrata HOM05D005177 ORTHO05D006175 1.7e-142 510.0 390 65.9
Prupe.6G094900 Prunus persica HOM05D005177 ORTHO05D006175 2.8e-137 492.7 401 63.1
TAR636G0661 Trochodendron aralioides HOM05D005177 ORTHO05D006175 3.1e-136 489.2 390 63.3
Cc01_g11530 Coffea canephora HOM05D005177 ORTHO05D006175 1.7e-134 483.4 409 60.4
MD03G1105200 Malus domestica HOM05D005177 ORTHO05D006175 1.7e-134 483.4 413 62.0
Duzib168G0988 Durio zibethinus HOM05D005177 ORTHO05D006175 2.2e-134 483.0 410 62.4
COL.COLO4_25245 Corchorus olitorius HOM05D005177 ORTHO05D006175 1.6e-132 476.9 413 60.0
Migut.D02184 Erythranthe guttata HOM05D005177 ORTHO05D006175 6.1e-132 474.9 399 60.4
Nn2g10682 Nelumbo nucifera HOM05D005177 ORTHO05D006175 8.0e-132 474.6 411 60.3
QL01p037260 Quercus lobata HOM05D005177 ORTHO05D006175 5.2e-131 471.9 401 60.1
Cfa011363 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.3e-129 467.2 384 62.8
Oeu005908.1 Olea europaea HOM05D005177 ORTHO05D006175 2.2e-129 466.5 402 62.2
RcHm_v2.0_Chr5g0060611 Rosa chinensis HOM05D005177 ORTHO05D006175 4.8e-129 465.3 398 60.1
Gohir.D02G184700 Gossypium hirsutum HOM05D005177 ORTHO05D006175 6.3e-129 464.9 398 60.6
Gorai.005G207000 Gossypium raimondii HOM05D005177 ORTHO05D006175 6.3e-129 464.9 398 60.6
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 1.6e-127 460.3 400 59.2
vmacro14462 Vaccinium macrocarpon HOM05D005177 ORTHO05D006175 3.5e-127 459.1 394 59.9
MSTRG.18639 Avicennia marina HOM05D005177 ORTHO05D006175 7.7e-127 458.0 380 62.6
TWI79G0119 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 7.7e-127 458.0 408 59.6
Thecc.09G260100 Theobroma cacao HOM05D005177 ORTHO05D006175 2.2e-126 456.4 387 60.2
GSVIVG01025137001 Vitis vinifera HOM05D005177 ORTHO05D006175 2.9e-126 456.1 374 63.1
TWI31G0237 Tripterygium wilfordii HOM05D005177 ORTHO05D006175 1.9e-125 453.4 405 59.5
Duzib170G1166 Durio zibethinus HOM05D005177 ORTHO05D006175 1.2e-124 450.7 423 56.7
Manes.11G141500 Manihot esculenta HOM05D005177 ORTHO05D006175 4.7e-124 448.7 409 58.2
PSO339G4756 Papaver somniferum HOM05D005177 ORTHO05D006175 8.0e-124 448.0 398 59.0
Atru.chr3.3689 Acer truncatum HOM05D005177 ORTHO05D006175 1.2e-122 444.1 395 59.2
Cpa.g.sc139.70 Carica papaya HOM05D005177 ORTHO05D006175 2.6e-122 443.0 398 59.3
unitig_899.g14907 Utricularia gibba HOM05D005177 ORTHO05D006175 4.4e-122 442.2 403 58.1
Rhsim01G0220100 Rhododendron simsii HOM05D005177 ORTHO05D006175 1.4e-120 437.2 362 61.6
Ciclev10028554m.g Citrus clementina HOM05D005177 ORTHO05D006175 1.8e-120 436.8 379 57.8
PGR102G1116 Punica granatum HOM05D005177 ORTHO05D006175 3.1e-120 436.0 393 58.0
CANSAT54G2759 Cannabis sativa HOM05D005177 ORTHO05D006175 5.9e-119 431.8 391 55.8
PSO063G2407 Papaver somniferum HOM05D005177 ORTHO05D006175 1.7e-118 430.3 440 54.1
Aqoxy4G03211 Aquilegia oxysepala HOM05D005177 ORTHO05D006175 9.5e-117 424.5 412 53.2
TPR.G14917 Trifolium pratense HOM05D005177 ORTHO05D006175 3.0e-115 419.5 406 53.4
Glyma.11G153378 Glycine max HOM05D005177 ORTHO05D006175 8.9e-115 417.9 397 55.9
Phvul.011G072700 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 2.0e-114 416.8 377 57.3
DCAR_006046 Daucus carota HOM05D005177 ORTHO05D006175 9.8e-114 414.5 361 58.4
VMungo1127G2232 Vigna mungo HOM05D005177 ORTHO05D006175 1.3e-113 414.1 394 56.1
Psat0s137g0200 Pisum sativum HOM05D005177 ORTHO05D006175 1.1e-112 411.0 382 55.2
MELO3C025749.2 Cucumis melo HOM05D005177 ORTHO05D006175 1.4e-112 410.6 384 55.2
Lj3g0023073 Lotus japonicus HOM05D005177 ORTHO05D006175 9.2e-112 407.9 397 53.4
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.2e-111 407.5 385 54.5
Dinv14445 Davidia involucrata HOM05D005177 ORTHO05D006175 1.0e-110 404.4 347 61.1
FvH4_3g33260 Fragaria vesca HOM05D005177 ORTHO05D006175 3.0e-110 402.9 378 56.3
THA.LOC104814837 Tarenaya hassleriana HOM05D005177 ORTHO05D006175 5.0e-110 402.1 401 53.1
CiPaw.13G107400 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.5e-109 400.6 352 58.5
Lsat_1_v5_gn_2_50980 Lactuca sativa HOM05D005177 ORTHO05D006175 5.6e-109 398.7 391 54.2
ClCG02G020960 Citrullus lanatus HOM05D005177 ORTHO05D006175 7.3e-109 398.3 408 52.9
CiPaw.13G107500 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.6e-108 397.1 316 63.6
Medtr4g060790 Medicago truncatula HOM05D005177 ORTHO05D006175 1.4e-107 394.0 384 53.4
Lalb_Chr01g0004161 Lupinus albus HOM05D005177 ORTHO05D006175 2.0e-106 390.2 377 55.7
BcaB05g22637 Brassica carinata HOM05D000280 ORTHO05D000632 7.5e-106 388.3 416 50.0
BcaC03g13978 Brassica carinata HOM05D005177 ORTHO05D006175 7.5e-106 388.3 401 52.1
AL8G36980 Arabidopsis lyrata HOM05D005177 ORTHO05D006175 9.8e-106 387.9 404 51.5
arahy.Tifrunner.gnm1.ann1.X56S8K Arachis hypogaea HOM05D005177 ORTHO05D006175 9.8e-106 387.9 422 50.9
BraA02t05734Z Brassica rapa HOM05D005177 ORTHO05D006175 9.8e-106 387.9 402 51.5
RcHm_v2.0_Chr5g0060621 Rosa chinensis HOM05D005177 ORTHO05D006175 1.7e-105 387.1 393 52.7
AT5G60370 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 1.1e-104 384.4 403 50.4
Eucgr.B02471 Eucalyptus grandis HOM05D005177 ORTHO05D006175 1.9e-104 383.6 374 52.1
CiPaw.13G107200 Carya illinoinensis HOM05D005177 ORTHO05D006175 2.4e-104 383.3 414 51.4
Sp6g21970 Schrenkiella parvula HOM05D005177 ORTHO05D006175 2.4e-104 383.3 391 50.6
arahy.Tifrunner.gnm1.ann1.Q9R44R Arachis hypogaea HOM05D005177 ORTHO05D006175 3.2e-104 382.9 422 50.5
CsaV3_6G021650 Cucumis sativus L. HOM05D005177 ORTHO05D006175 3.2e-104 382.9 380 51.6
BolC2t07273H Brassica oleracea HOM05D005177 ORTHO05D006175 7.0e-104 381.7 383 53.0
Aa31LG1G12430 Aethionema arabicum HOM05D005177 ORTHO05D006175 9.2e-104 381.3 402 50.5
Carub.0008s2107 Capsella rubella HOM05D005177 ORTHO05D006175 2.0e-103 380.2 389 51.4
Hund08273 Selenicereus undatus HOM05D005177 ORTHO05D006175 2.0e-103 380.2 426 50.0
Haze_23912 Corylus avellana HOM05D005177 ORTHO05D006175 2.7e-103 379.8 382 54.2
Ah.01g015010 Amaranthus hybridus HOM05D005177 ORTHO05D006175 1.3e-102 377.5 395 49.9
Thhalv10013696m.g Eutrema salsugineum HOM05D005177 ORTHO05D006175 5.0e-102 375.6 402 49.5
Haze_23911 Corylus avellana HOM05D005177 ORTHO05D006175 8.6e-102 374.8 396 52.8
Sc06g0010530 Simmondsia chinensis HOM05D005177 ORTHO05D006175 5.6e-101 372.1 368 54.3
CiPaw.13G107600 Carya illinoinensis HOM05D005177 ORTHO05D006175 1.2e-100 370.9 259 66.0
Lj3g0021588 Lotus japonicus HOM05D005177 ORTHO05D006175 1.4e-99 367.5 397 49.9
AUR62006522 Chenopodium quinoa HOM05D005177 ORTHO05D006175 6.8e-99 365.2 380 52.1
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.7e-97 360.5 379 52.0
Dinv01415 Davidia involucrata HOM05D005177 ORTHO05D006175 2.2e-97 360.1 252 69.0
Gohir.A03G161400 Gossypium hirsutum HOM05D005177 ORTHO05D006175 3.5e-95 352.8 313 60.7
SGA_v2.0_scaffold97G29176 Striga asiatica HOM05D005177 ORTHO05D006175 6.0e-95 352.1 415 50.6
Os05g0123300 Oryza sativa ssp. japonica HOM05D005177 ORTHO05D006175 1.0e-94 351.3 398 46.5
ATR1159G017 Amborella trichopoda HOM05D005177 ORTHO05D006175 1.1e-93 347.8 400 47.0
EL10Ac9g22467 Beta vulgaris HOM05D005177 ORTHO05D006175 1.1e-93 347.8 397 48.6
ECA238G1817 Erigeron canadensis HOM05D000382 ORTHO05D000391 5.6e-93 345.5 387 50.1
SHI06048 Sapria himalayana HOM05D005177 ORTHO05D006175 2.8e-92 343.2 369 49.6
Psat6g221840 Pisum sativum HOM05D005177 ORTHO05D006175 3.6e-92 342.8 403 47.4
HanXRQChr14g0433031 Helianthus annuus HOM05D005177 ORTHO05D006175 4.7e-92 342.4 368 51.9
Zm00001eb265420 Zea mays HOM05D005177 ORTHO05D006175 4.7e-92 342.4 383 47.3
QL01p037225 Quercus lobata HOM05D005177 ORTHO05D006175 5.2e-91 339.0 456 43.9
Phvul.007G036300 Phaseolus vulgaris HOM05D005177 ORTHO05D006175 4.9e-89 332.4 355 49.0
CSS0008980 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D006175 8.4e-89 331.6 233 66.5
Ca_11098_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 1.1e-88 331.3 410 45.9
Haze_23910 Corylus avellana HOM05D005177 ORTHO05D006175 1.2e-84 317.8 378 47.9
FAN21G0634 Fragaria x ananassa HOM05D005177 ORTHO05D006175 4.7e-84 315.8 376 48.7
VMungo0251G1016 Vigna mungo HOM05D005177 ORTHO05D006175 4.0e-83 312.8 389 46.3
QL01p037240 Quercus lobata HOM05D005177 ORTHO05D006175 6.8e-83 312.0 253 59.7
CDE04G2914 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 9.9e-82 308.1 373 48.0
C02p11760 Brassica napus HOM05D005177 ORTHO05D006175 3.2e-80 303.1 259 56.0
Mapoly0004s0234 Marchantia polymorpha HOM05D005177 ORTHO05D006175 3.5e-79 299.7 316 46.8
Medtr1g062090 Medicago truncatula HOM05D005177 ORTHO05D006175 1.5e-77 294.3 398 43.0
SMO143G0224 Selaginella moellendorffii HOM05D005177 ORTHO05D006175 9.6e-77 291.6 375 42.1
PSO339G4079 Papaver somniferum HOM05D005177 ORTHO05D006175 2.1e-76 290.4 303 50.2
Pp3c24_6040 Physcomitrium patens HOM05D005177 ORTHO05D006175 6.2e-76 288.9 284 48.9
TPR.G4931 Trifolium pratense HOM05D005177 ORTHO05D006175 1.8e-75 287.3 405 41.5
PSO384G3506 Papaver somniferum HOM05D005177 ORTHO05D006175 2.4e-75 287.0 307 48.9
Lj5g0027081 Lotus japonicus HOM05D005177 ORTHO05D006175 3.4e-74 283.1 296 49.3
CARHR274040 Cardamine hirsuta HOM05D005177 ORTHO05D006175 6.4e-73 278.9 289 52.6
Lj2C1035T4 Lonicera japonica HOM05D005177 ORTHO05D006175 1.9e-64 250.8 188 66.5
Lalb_Chr06g0165641 Lupinus albus HOM05D005177 ORTHO05D006175 5.5e-64 249.2 358 41.9
Ca_19242_v3 Cicer arietinum L. HOM05D005177 ORTHO05D006175 6.7e-62 242.3 181 60.8
CBR_g2921 Chara braunii HOM05D005177 ORTHO05D006175 1.5e-61 241.1 275 42.9
Lalb_Chr03g0027131 Lupinus albus HOM05D005177 ORTHO05D006175 2.8e-60 236.9 253 53.0
MD11G1130000 Malus domestica HOM05D005177 ORTHO05D006175 1.9e-56 224.2 178 59.0
AUR62025012 Chenopodium quinoa HOM05D005177 ORTHO05D006175 5.1e-54 216.1 183 54.6
CDE07G1541 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 1.7e-49 201.1 223 56.1
HPP92_013896 Vanilla planifolia HOM05D005177 ORTHO05D006175 2.7e-47 193.7 244 47.5
Lalb_Chr03g0027121 Lupinus albus HOM05D005177 ORTHO05D006175 1.2e-42 178.3 134 60.4
Glyma.20G125100 Glycine max HOM05D005177 ORTHO05D006175 1.7e-41 174.5 225 43.6
Aqoxy230s004 Aquilegia oxysepala HOM05D000156 ORTHO05D002600 1.3e-33 148.3 112 60.7
MD12G1113200 Malus domestica HOM05D005177 ORTHO05D006175 1.8e-27 127.9 106 56.6
SalBow7G3352 Salvia bowleyana HOM05D005177 ORTHO05D006175 7.0e-27 125.9 158 46.8
AUR62033196 Chenopodium quinoa HOM05D005177 ORTHO05D006175 9.1e-27 125.6 101 57.4
Lj2A1035T47 Lonicera japonica HOM05D005177 ORTHO05D006175 2.0e-26 124.4 168 48.8
MD03G1203800 Malus domestica HOM05D005177 ORTHO05D006175 2.0e-26 124.4 106 55.7
MD02G1279000 Malus domestica HOM05D005177 ORTHO05D006175 5.9e-26 122.9 106 56.6
SalBow2G1018 Salvia bowleyana HOM05D005177 ORTHO05D006175 6.5e-25 119.4 108 54.6
AUR62037383 Chenopodium quinoa HOM05D005177 ORTHO05D006175 8.5e-25 119.0 101 52.5
SalBow8G4533 Salvia bowleyana HOM05D005177 ORTHO05D006175 1.6e-23 114.8 86 64.0
CDE07G0204 Ceratophyllum demersum HOM05D005177 ORTHO05D006175 6.1e-23 112.8 89 61.8
SEGI_18444 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 6.7e-22 109.4 77 64.9
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.5e-21 108.2 107 56.1
SEGI_09926 Sequoiadendron giganteum HOM05D005177 ORTHO05D006175 2.0e-13 81.3 96 38.5
CSS0040502 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D033885 6.3e-12 76.3 149 43.6
QL01p037253 Quercus lobata HOM05D005177 ORTHO05D033885 6.3e-12 76.3 137 45.3
CSS0013492 Camellia sinensis var. sinensis HOM05D005177 ORTHO05D033885 1.3e-09 68.6 145 41.4
MD02G1245500 Malus domestica HOM05D005177 ORTHO05D006175 8.0e-07 59.3 42 66.7
AT3G57110 Arabidopsis thaliana HOM05D005177 ORTHO05D006175 2.3e-06 57.8 134 34.3

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (1 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (2 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (2 genes)
Arachis hypogaea (2 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (3 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (1 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (2 genes)
Carya illinoinensis (4 genes)
Ceratophyllum demersum (3 genes)
Chara braunii (1 genes)
Chenopodium quinoa (4 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (3 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (3 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (1 genes)
Glycine max (2 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (0 genes)
Lactuca sativa (1 genes)
Lonicera japonica (2 genes)
Lotus japonicus (3 genes)
Lupinus albus (4 genes)
Magnolia biondii (0 genes)
Malus domestica (7 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (1 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (2 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (0 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (4 genes)
Rhododendron simsii (1 genes)
Rosa chinensis (2 genes)
Salix brachista (0 genes)
Salvia bowleyana (3 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (2 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (1 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (2 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings