Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 8.7e-290 999.6 505 100.0
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 1.0e-285 986.1 502 99.4
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 2.5e-276 954.9 502 96.2
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.9e-252 875.5 504 88.9
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.8e-250 869.0 504 87.7
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 5.6e-236 820.8 506 83.4
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 6.0e-182 641.3 493 64.9
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 2.1e-179 632.9 499 64.9
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 2.6e-177 625.9 473 67.2
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 3.4e-177 625.5 510 67.5
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 6.5e-176 621.3 503 64.8
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 2.1e-174 616.3 503 63.2
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 6.9e-170 601.3 492 62.4
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 4.5e-169 598.6 509 61.9
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 2.9e-168 595.9 494 62.8
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 3.8e-168 595.5 496 62.5
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 5.0e-168 595.1 494 62.3
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 8.5e-168 594.3 500 63.4
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 1.9e-167 593.2 488 63.5
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 1.2e-166 590.5 493 61.7
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 4.6e-166 588.6 490 61.6
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 4.6e-166 588.6 492 62.8
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 1.0e-165 587.4 489 63.6
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 6.7e-165 584.7 493 61.3
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 6.7e-165 584.7 489 63.4
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 1.1e-164 583.9 496 61.1
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 2.0e-164 583.2 438 66.7
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 2.0e-164 583.2 474 61.6
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 4.3e-164 582.0 486 62.6
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 5.7e-164 581.6 493 61.7
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 1.3e-163 580.5 495 60.8
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 1.7e-163 580.1 504 60.7
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 3.7e-163 578.9 495 60.6
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 3.7e-163 578.9 495 60.6
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 3.7e-163 578.9 494 60.5
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 6.3e-163 578.2 491 62.3
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 1.4e-162 577.0 508 57.7
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 1.8e-162 576.6 476 62.6
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 2.4e-162 576.2 490 62.9
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 3.1e-162 575.9 493 60.9
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 5.3e-162 575.1 486 60.1
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 9.1e-162 574.3 502 60.2
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 2.6e-161 572.8 491 60.5
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 5.9e-161 571.6 495 59.4
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 5.9e-161 571.6 491 60.7
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 7.7e-161 571.2 490 59.8
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 1.0e-160 570.9 495 59.2
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 1.7e-160 570.1 491 59.9
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 6.5e-160 568.2 497 60.0
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 8.5e-160 567.8 504 60.7
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 5.5e-159 565.1 495 59.0
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 9.4e-159 564.3 601 51.2
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 1.2e-158 563.9 487 59.1
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 7.9e-158 561.2 493 60.6
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 7.9e-158 561.2 446 64.3
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 3.9e-157 558.9 490 58.2
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 2.6e-156 556.2 435 64.4
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 5.7e-156 555.1 508 57.9
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 5.7e-156 555.1 437 63.4
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 2.4e-154 549.7 436 64.2
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 4.1e-154 548.9 488 58.2
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 1.2e-153 547.4 496 57.7
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 2.6e-153 546.2 500 58.4
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 3.5e-153 545.8 481 59.7
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 3.5e-153 545.8 436 64.2
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 3.5e-153 545.8 497 58.4
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 7.7e-153 544.7 468 60.0
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 3.8e-152 542.3 504 57.1
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 5.5e-151 538.5 492 58.5
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 4.7e-150 535.4 480 57.9
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 6.1e-150 535.0 439 64.0
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 1.8e-149 533.5 488 57.0
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 4.4e-148 528.9 497 57.9
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 5.7e-148 528.5 447 60.6
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 8.2e-147 524.6 471 56.7
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 2.4e-146 523.1 496 56.5
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 1.0e-144 517.7 451 60.3
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 2.2e-144 516.5 497 56.3
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 5.0e-144 515.4 496 55.8
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 5.0e-144 515.4 496 55.8
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 8.5e-144 514.6 478 57.1
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 1.5e-143 513.8 486 56.6
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 5.5e-143 511.9 510 55.3
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 3.6e-142 509.2 451 59.6
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 4.7e-142 508.8 480 56.5
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 6.1e-142 508.4 497 54.3
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 8.0e-142 508.1 416 61.5
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 8.0e-142 508.1 431 59.9
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 1.0e-141 507.7 472 55.3
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 1.8e-141 506.9 490 57.1
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 8.8e-141 504.6 515 53.6
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 3.4e-140 502.7 438 58.7
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 4.4e-140 502.3 433 59.1
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 5.7e-140 501.9 479 55.3
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 5.7e-140 501.9 484 55.2
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 5.7e-140 501.9 499 53.9
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 6.3e-139 498.4 497 52.9
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 7.0e-138 495.0 500 53.8
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 1.2e-137 494.2 424 60.8
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 1.6e-137 493.8 506 53.2
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 4.2e-135 485.7 508 52.0
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 1.6e-134 483.8 498 53.2
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 6.1e-134 481.9 511 51.3
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 1.0e-133 481.1 502 51.4
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 5.2e-133 478.8 454 58.4
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 8.8e-133 478.0 466 54.7
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 7.5e-132 474.9 449 55.9
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 9.8e-132 474.6 497 53.5
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 2.8e-131 473.0 461 53.6
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 6.3e-131 471.9 497 52.1
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 1.1e-127 461.1 509 50.3
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 1.4e-125 454.1 427 56.7
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 4.4e-124 449.1 408 57.4
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 4.6e-121 439.1 497 50.9
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 1.7e-120 437.2 400 59.2
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 1.8e-117 427.2 386 58.8
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 4.6e-113 412.5 322 62.4
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 1.0e-112 411.4 415 55.4
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 1.1e-111 407.9 430 53.3
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 4.7e-110 402.5 331 61.6
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 5.8e-108 395.6 476 47.7
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 2.8e-102 376.7 306 61.8
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 2.0e-100 370.5 427 50.8
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 4.3e-95 352.8 483 43.5
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 1.4e-93 347.8 363 54.5
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 2.9e-91 340.1 301 58.5
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 1.2e-89 334.7 478 41.0
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 6.9e-85 318.9 419 44.4
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 2.1e-81 307.4 200 74.5
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 1.4e-74 284.6 294 52.4
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 7.1e-74 282.3 313 48.9
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 5.1e-72 276.2 283 50.9
MBI10_g19822_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 4.0e-69 266.5 288 52.8
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 1.7e-67 261.2 491 33.8
Dinv32733 Davidia involucrata HOM05D000452 ORTHO05D005748 4.2e-66 256.5 238 59.7
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 1.3e-64 251.5 188 65.4
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 2.7e-49 200.7 167 62.9
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 3.9e-48 196.8 125 73.6
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 1.0e-40 172.2 320 32.5
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 1.1e-39 168.7 278 37.1
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 4.5e-36 156.8 150 58.7
SHI19558 Sapria himalayana HOM05D000452 ORTHO05D000031 2.4e-29 134.4 242 34.7
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 2.5e-26 124.4 89 62.9
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 3.6e-25 120.6 84 66.7
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 2.0e-23 114.8 80 62.5
MBI15_g38533_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 1.7e-19 101.7 125 48.8
HPP92_008615 Vanilla planifolia HOM05D000452 ORTHO05D005748 1.0e-16 92.4 155 38.1
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 6.8e-16 89.7 66 63.6
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 8.8e-16 89.4 65 64.6
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 4.4e-15 87.0 65 63.1
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 2.9e-11 74.3 57 64.9
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 2.5e-10 71.2 46 67.4
PRCOL_00002815 Prasinoderma coloniale HOM05D000452 ORTHO05D333388 5.7e-07 60.1 391 22.3
BcaC02g07555 Brassica carinata HOM05D000452 ORTHO05D005748 4.9e-06 57.0 31 74.2
Zm00001eb140800 Zea mays HOM05D000433 ORTHO05D000443 4.9e-06 57.0 124 33.9
Zm00001eb318140 Zea mays HOM05D000433 ORTHO05D000443 8.3e-06 56.2 213 29.6

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (1 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (4 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (5 genes)
Brassica napus (6 genes)
Brassica oleracea (4 genes)
Brassica rapa (2 genes)
Camellia sinensis var. sinensis (1 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (0 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (1 genes)
Carya illinoinensis (2 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum L. (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (4 genes)
Daucus carota (2 genes)
Davidia involucrata (3 genes)
Durio zibethinus (0 genes)
Erigeron canadensis (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (1 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (1 genes)
Gossypium hirsutum (2 genes)
Gossypium raimondii (1 genes)
Helianthus annuus (2 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (7 genes)
Lonicera japonica (2 genes)
Lotus japonicus (1 genes)
Lupinus albus (2 genes)
Magnolia biondii (3 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (2 genes)
Olea europaea (4 genes)
Oryza sativa ssp. japonica (1 genes)
Papaver somniferum (4 genes)
Petunia axillaris (2 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (1 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (2 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (1 genes)
Rhododendron simsii (2 genes)
Rosa chinensis (1 genes)
Salix brachista (0 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (2 genes)
Schrenkiella parvula (1 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (1 genes)
Selenicereus undatus (2 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (1 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (2 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (4 genes)

Program Settings