Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g067150.2 Solanum lycopersicum HOM05D005297 ORTHO05D006545 2.1e-97 359.0 180 100.0
Sopen11g026830 Solanum pennellii HOM05D005297 ORTHO05D006545 2.1e-97 359.0 180 100.0
PGSC0003DMG400007409 Solanum tuberosum HOM05D005297 ORTHO05D006545 4.2e-93 344.7 176 98.3
Nitab4.5_0003532g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 7.6e-87 323.9 176 91.5
CAN.G1177.8 Capsicum annuum HOM05D005297 ORTHO05D006545 1.1e-85 320.1 168 94.6
CAN.G644.6 Capsicum annuum HOM05D005297 ORTHO05D006545 1.1e-85 320.1 176 92.6
Peaxi162Scf00544g00918 Petunia axillaris HOM05D005297 ORTHO05D006545 7.1e-85 317.4 168 93.5
Nitab4.5_0021448g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 1.9e-82 309.3 168 91.1
QL02p014091 Quercus lobata HOM05D005297 ORTHO05D006545 1.3e-81 306.6 176 86.9
CANSAT64G2769 Cannabis sativa HOM05D005297 ORTHO05D006545 3.7e-81 305.1 176 84.1
Atru.chr3.3335 Acer truncatum HOM05D005297 ORTHO05D006545 1.5e-79 299.7 176 84.1
unitig_736.g22397 Utricularia gibba HOM05D005297 ORTHO05D006545 2.0e-79 299.3 176 84.7
CSS0010276 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 3.4e-79 298.5 179 83.8
Thecc.09G287800 Theobroma cacao HOM05D005297 ORTHO05D006545 3.4e-79 298.5 176 85.2
MELO3C003122.2 Cucumis melo HOM05D005297 ORTHO05D006545 5.8e-79 297.7 175 84.6
CsaV3_4G024870 Cucumis sativus L. HOM05D005297 ORTHO05D006545 5.8e-79 297.7 175 84.6
MSTRG.18743 Avicennia marina HOM05D005297 ORTHO05D006545 1.3e-78 296.6 176 84.1
Migut.N00940 Erythranthe guttata HOM05D005297 ORTHO05D006545 2.2e-78 295.8 176 83.0
Haze_23424 Corylus avellana HOM05D005297 ORTHO05D006545 2.9e-78 295.4 163 89.6
Duzib150G0109 Durio zibethinus HOM05D005297 ORTHO05D006545 2.9e-78 295.4 176 83.5
Eucgr.J00466 Eucalyptus grandis HOM05D005297 ORTHO05D006545 2.9e-78 295.4 176 83.0
Gorai.001G120900 Gossypium raimondii HOM05D005297 ORTHO05D006545 3.8e-78 295.0 176 84.1
PGR119G1280 Punica granatum HOM05D005297 ORTHO05D006545 8.4e-78 293.9 177 81.9
Manes.11G159700 Manihot esculenta HOM05D005297 ORTHO05D006545 1.9e-77 292.7 180 80.6
Gohir.D07G112500 Gossypium hirsutum HOM05D005297 ORTHO05D006545 2.5e-77 292.4 176 83.0
Gohir.A07G108700 Gossypium hirsutum HOM05D005297 ORTHO05D006545 4.2e-77 291.6 176 83.0
Gohir.A07G108780 Gossypium hirsutum HOM05D005297 ORTHO05D006545 4.2e-77 291.6 176 83.0
CiPaw.13G138500 Carya illinoinensis HOM05D005297 ORTHO05D006545 5.5e-77 291.2 199 75.9
SalBow6G5239 Salvia bowleyana HOM05D005297 ORTHO05D006545 5.5e-77 291.2 175 84.0
GSVIVG01036187001 Vitis vinifera HOM05D005297 ORTHO05D006545 5.5e-77 291.2 168 86.3
Lsat_1_v5_gn_8_117180 Lactuca sativa HOM05D005297 ORTHO05D006545 1.6e-76 289.7 181 78.5
Manes.14G159600 Manihot esculenta HOM05D005297 ORTHO05D006545 2.7e-76 288.9 179 79.9
Sabra09G0113000 Salix brachista HOM05D005297 ORTHO05D006545 2.7e-76 288.9 179 81.0
Sabra09G0115400 Salix brachista HOM05D005297 ORTHO05D006545 2.7e-76 288.9 179 81.0
Dinv29444 Davidia involucrata HOM05D005297 ORTHO05D006545 4.6e-76 288.1 163 89.0
ECA236G0310 Erigeron canadensis HOM05D005297 ORTHO05D006545 7.9e-76 287.3 179 78.8
Carub.0006s3210 Capsella rubella HOM05D005297 ORTHO05D006545 1.0e-75 287.0 178 81.5
SGA_v2.0_scaffold147G36360 Striga asiatica HOM05D005297 ORTHO05D006545 1.3e-75 286.6 177 81.4
Nn2g14072 Nelumbo nucifera HOM05D005297 ORTHO05D006545 2.3e-75 285.8 176 80.1
THA.LOC104799541 Tarenaya hassleriana HOM05D005297 ORTHO05D006545 2.3e-75 285.8 178 79.8
BcaC04g21280 Brassica carinata HOM05D005297 ORTHO05D006545 3.0e-75 285.4 179 82.1
Potri.009G146100 Populus trichocarpa HOM05D005297 ORTHO05D006545 3.0e-75 285.4 179 79.9
Aqoxy4G02831 Aquilegia oxysepala HOM05D005297 ORTHO05D006545 3.9e-75 285.0 179 80.4
Rhsim13G0108000 Rhododendron simsii HOM05D005297 ORTHO05D006545 3.9e-75 285.0 176 80.1
Hund18738 Selenicereus undatus HOM05D005297 ORTHO05D006545 3.9e-75 285.0 175 81.1
Aa31LG6G1540 Aethionema arabicum HOM05D005297 ORTHO05D006545 5.1e-75 284.6 178 80.3
Ciclev10029400m.g Citrus clementina HOM05D005297 ORTHO05D006545 5.1e-75 284.6 176 80.1
Sp6g04610 Schrenkiella parvula HOM05D005297 ORTHO05D006545 5.1e-75 284.6 178 80.3
CARHR253330 Cardamine hirsuta HOM05D005297 ORTHO05D006545 6.7e-75 284.3 183 78.1
Cc01_g09520 Coffea canephora HOM05D005297 ORTHO05D006545 6.7e-75 284.3 168 83.3
HanXRQChr13g0408991 Helianthus annuus HOM05D005297 ORTHO05D006545 8.7e-75 283.9 179 78.2
TAR623G0730 Trochodendron aralioides HOM05D005297 ORTHO05D006545 8.7e-75 283.9 176 80.1
EL10Ac7g15793 Beta vulgaris HOM05D005297 ORTHO05D006545 1.1e-74 283.5 179 78.8
RcHm_v2.0_Chr5g0054901 Rosa chinensis HOM05D005297 ORTHO05D006545 1.1e-74 283.5 159 86.8
RcHm_v2.0_Chr5g0054661 Rosa chinensis HOM05D005297 ORTHO05D006545 1.5e-74 283.1 161 85.1
BcaB01g01797 Brassica carinata HOM05D005297 ORTHO05D006545 1.9e-74 282.7 178 80.9
AUR62009792 Chenopodium quinoa HOM05D005297 ORTHO05D006545 4.3e-74 281.6 180 77.8
Thhalv10029010m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 7.4e-74 280.8 177 79.1
Hma1.2p1_0305F.1_g119460 Hydrangea macrophylla HOM05D005297 ORTHO05D006545 1.6e-73 279.6 155 89.0
Prupe.6G124400 Prunus persica HOM05D005297 ORTHO05D006545 1.6e-73 279.6 161 84.5
AT4G04190 Arabidopsis thaliana HOM05D005297 ORTHO05D006545 2.1e-73 279.3 184 77.7
C09p33610 Brassica napus HOM05D002056 ORTHO05D002289 4.8e-73 278.1 174 82.8
FAN16G3468 Fragaria x ananassa HOM05D005297 ORTHO05D006545 4.8e-73 278.1 159 85.5
FAN21G1663 Fragaria x ananassa HOM05D005297 ORTHO05D006545 4.8e-73 278.1 159 85.5
Medtr0227s0030 Medicago truncatula HOM05D005297 ORTHO05D006545 1.1e-72 276.9 160 85.0
Lsat_1_v5_gn_8_90380 Lactuca sativa HOM05D005297 ORTHO05D006545 1.8e-72 276.2 172 78.5
A09p26430 Brassica napus HOM05D005297 ORTHO05D006545 2.4e-72 275.8 174 82.2
MD11G1160800 Malus domestica HOM05D005297 ORTHO05D006545 3.1e-72 275.4 161 82.0
Sp7g17550 Schrenkiella parvula HOM05D005297 ORTHO05D006545 4.1e-72 275.0 179 77.7
Sc15g0007560 Simmondsia chinensis HOM05D005297 ORTHO05D006545 5.3e-72 274.6 175 77.7
Sc21g0007210 Simmondsia chinensis HOM05D005297 ORTHO05D006545 9.0e-72 273.9 165 81.2
vmacro03296 Vaccinium macrocarpon HOM05D005297 ORTHO05D006545 9.0e-72 273.9 182 76.4
Lj2g0006626 Lotus japonicus HOM05D005297 ORTHO05D006545 2.0e-71 272.7 158 84.8
Medtr4g088775 Medicago truncatula HOM05D005297 ORTHO05D006545 2.0e-71 272.7 160 83.8
PSO384G0067 Papaver somniferum HOM05D005297 ORTHO05D006545 2.6e-71 272.3 174 76.4
BolC9t56195H Brassica oleracea HOM05D002056 ORTHO05D002289 3.4e-71 271.9 168 83.3
Glyma.12G183000 Glycine max HOM05D005297 ORTHO05D006545 3.4e-71 271.9 160 83.8
Lalb_Chr24g0395231 Lupinus albus HOM05D005297 ORTHO05D006545 3.4e-71 271.9 158 83.5
AL6G47810 Arabidopsis lyrata HOM05D005297 ORTHO05D006545 5.9e-71 271.2 188 73.9
FvH4_3g29610 Fragaria vesca HOM05D005297 ORTHO05D006545 5.9e-71 271.2 159 83.6
FAN11G1678 Fragaria x ananassa HOM05D005297 ORTHO05D006545 5.9e-71 271.2 159 83.6
Psat2g130440 Pisum sativum HOM05D005297 ORTHO05D006545 7.6e-71 270.8 159 84.9
HPP92_006421 Vanilla planifolia HOM05D005297 ORTHO05D006545 7.6e-71 270.8 178 76.4
arahy.Tifrunner.gnm1.ann1.CT6H1M Arachis hypogaea HOM05D005297 ORTHO05D006545 1.0e-70 270.4 159 81.8
PSO425G0036 Papaver somniferum HOM05D005297 ORTHO05D006545 1.0e-70 270.4 174 76.4
TWI79G0927 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 1.3e-70 270.0 176 73.3
BraA09t38217Z Brassica rapa HOM05D005297 ORTHO05D006545 1.7e-70 269.6 168 82.7
MBI17_g16878_MAGBIO Magnolia biondii HOM05D005297 ORTHO05D006545 3.8e-70 268.5 175 73.1
TWI79G0105 Tripterygium wilfordii HOM05D005297 ORTHO05D006545 3.8e-70 268.5 176 73.3
Glyma.13G318100 Glycine max HOM05D005297 ORTHO05D006545 6.5e-70 267.7 159 83.0
Phvul.005G125900 Phaseolus vulgaris HOM05D005297 ORTHO05D006545 1.4e-69 266.5 162 80.2
Zm00001eb084080 Zea mays HOM05D005297 ORTHO05D006545 1.9e-69 266.2 179 76.0
Cpa.g.sc32.130 Carica papaya HOM05D005297 ORTHO05D006545 5.5e-69 264.6 168 78.0
PSO170G0247 Papaver somniferum HOM05D005297 ORTHO05D006545 5.5e-69 264.6 172 75.0
PSO801G0702 Papaver somniferum HOM05D005297 ORTHO05D006545 1.6e-68 263.1 178 72.5
Sed0022012 Sechium edule HOM05D005297 ORTHO05D006545 1.6e-68 263.1 145 89.7
ATR0820G241 Amborella trichopoda HOM05D005297 ORTHO05D006545 2.1e-68 262.7 167 77.2
arahy.Tifrunner.gnm1.ann1.Q11QUE Arachis hypogaea HOM05D005297 ORTHO05D006545 2.7e-68 262.3 171 77.8
CSS0048581 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 2.7e-68 262.3 145 89.0
Os04g0410300 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 1.8e-67 259.6 179 72.1
VMungo1080G0855 Vigna mungo HOM05D005392 ORTHO05D006709 3.0e-67 258.8 145 86.2
Ca_09074_v3 Cicer arietinum L. HOM05D005297 ORTHO05D006545 1.5e-66 256.5 144 88.2
PSO339G0592 Papaver somniferum HOM05D005297 ORTHO05D006545 1.9e-66 256.1 174 72.4
COL.COLO4_19936 Corchorus olitorius HOM05D005297 ORTHO05D006545 3.3e-66 255.4 137 92.7
TAR369G0691 Trochodendron aralioides HOM05D005297 ORTHO05D006545 1.3e-65 253.4 148 85.1
SEGI_17822 Sequoiadendron giganteum HOM05D005297 ORTHO05D006545 2.2e-65 252.7 176 69.3
Rhsim05G0032500 Rhododendron simsii HOM05D005297 ORTHO05D006545 4.8e-65 251.5 184 69.6
Thhalv10005498m.g Eutrema salsugineum HOM05D005297 ORTHO05D006545 8.2e-65 250.8 168 76.2
Rhsim13G0108200 Rhododendron simsii HOM05D005297 ORTHO05D006545 1.1e-64 250.4 142 85.2
arahy.Tifrunner.gnm1.ann1.K2P72U Arachis hypogaea HOM05D005780 ORTHO05D006545 2.4e-64 249.2 139 86.3
Nitab4.5_0024933g0010 Nicotiana tabacum HOM05D005297 ORTHO05D006545 2.4e-64 249.2 137 91.2
AUR62039239 Chenopodium quinoa HOM05D005297 ORTHO05D006545 7.7e-63 244.2 175 72.6
PSO339G2689 Papaver somniferum HOM05D005297 ORTHO05D006545 2.2e-62 242.7 158 75.3
PSO782G5408 Papaver somniferum HOM05D005297 ORTHO05D006545 2.9e-62 242.3 172 70.3
Os01g0191000 Oryza sativa ssp. japonica HOM05D005297 ORTHO05D006545 1.4e-59 233.4 154 74.0
Rhsim13G0107700 Rhododendron simsii HOM05D005297 ORTHO05D006545 6.7e-59 231.1 176 69.9
Medtr4g073910 Medicago truncatula HOM05D005297 ORTHO05D006545 5.9e-55 218.0 135 83.0
CSS0004713 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 2.9e-54 215.7 155 72.9
Pp3c27_2700 Physcomitrium patens HOM05D005297 ORTHO05D006545 5.5e-53 211.5 166 57.8
Actinidia24196 Actinidia chinensis HOM05D005392 ORTHO05D006709 1.4e-51 206.8 161 65.2
Lj2A987T34 Lonicera japonica HOM05D005297 ORTHO05D006545 1.1e-50 203.8 110 91.8
Mapoly0068s0054 Marchantia polymorpha HOM05D005297 ORTHO05D006545 2.2e-49 199.5 179 53.6
CDE11G0319 Ceratophyllum demersum HOM05D005297 ORTHO05D006545 8.2e-49 197.6 117 80.3
Duzib168G0206 Durio zibethinus HOM05D005297 ORTHO05D006545 1.4e-48 196.8 117 87.2
arahy.Tifrunner.gnm1.ann1.S3X3J8 Arachis hypogaea HOM05D005297 ORTHO05D006545 3.1e-48 195.7 109 86.2
MD03G1139300 Malus domestica HOM05D005297 ORTHO05D006545 1.5e-45 186.8 143 67.1
PSO782G3247 Papaver somniferum HOM05D005297 ORTHO05D006545 1.2e-42 177.2 125 70.4
TPR.G2691 Trifolium pratense HOM05D005297 ORTHO05D006545 4.4e-42 175.3 113 77.9
SHI11151 Sapria himalayana HOM05D005297 ORTHO05D000023 1.3e-38 163.7 137 62.8
CBR_g82609 Chara braunii HOM05D005297 ORTHO05D006545 2.9e-38 162.5 150 53.3
Ca_05140_v3 Cicer arietinum L. HOM05D005297 ORTHO05D012218 3.2e-37 159.1 100 78.0
DCAR_001100 Daucus carota HOM05D005297 ORTHO05D006545 8.8e-35 151.0 126 63.5
Gorai.006G055300 Gossypium raimondii HOM05D005297 ORTHO05D006545 8.8e-35 151.0 77 93.5
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 6.3e-33 144.8 116 68.1
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 8.3e-33 144.4 115 67.0
Oeu050204.1 Olea europaea HOM05D005297 ORTHO05D006545 1.6e-31 140.2 187 47.6
arahy.Tifrunner.gnm1.ann1.LDL4WN Arachis hypogaea HOM05D005297 ORTHO05D006545 2.9e-30 136.0 93 74.2
Gorai.005G178100 Gossypium raimondii HOM05D005297 ORTHO05D006545 3.8e-30 135.6 77 83.1
Gohir.D06G133032 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.5e-29 133.7 68 92.6
Gohir.D09G053026 Gossypium hirsutum HOM05D005297 ORTHO05D006545 1.5e-29 133.7 77 85.7
CSS0043339 Camellia sinensis var. sinensis HOM05D005297 ORTHO05D006545 3.2e-29 132.5 154 50.0
Oeu046141.1 Olea europaea HOM05D005297 ORTHO05D006545 2.1e-28 129.8 81 79.0
RcHm_v2.0_Chr5g0054771 Rosa chinensis HOM05D005297 ORTHO05D006545 7.5e-26 121.3 120 60.0
QL02p014117 Quercus lobata HOM05D005297 ORTHO05D006545 3.1e-24 115.9 65 87.7
Gohir.D02G158550 Gossypium hirsutum HOM05D005297 ORTHO05D006545 4.7e-20 102.1 77 68.8
C02p40370 Brassica napus HOM05D000848 ORTHO05D000007 4.0e-19 99.0 66 74.2
TPR.G32973 Trifolium pratense HOM05D005297 ORTHO05D006545 5.7e-18 95.1 52 86.5
BolC2t10071H Brassica oleracea HOM05D005297 ORTHO05D000007 2.4e-16 89.7 58 77.6
Psat2g121320 Pisum sativum HOM05D005297 ORTHO05D006545 3.2e-16 89.4 58 72.4

Acer truncatum (1 genes)
Actinidia chinensis (1 genes)
Aethionema arabicum (1 genes)
Amaranthus hybridus (0 genes)
Amborella trichopoda (1 genes)
Anthoceros agrestis (0 genes)
Aquilegia oxysepala (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis hypogaea (5 genes)
Avicennia marina (1 genes)
Beta vulgaris (1 genes)
Brassica carinata (2 genes)
Brassica napus (3 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Camellia sinensis var. sinensis (4 genes)
Cannabis sativa (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (2 genes)
Cardamine hirsuta (1 genes)
Carica papaya (1 genes)
Carpinus fangiana (0 genes)
Carya illinoinensis (1 genes)
Ceratophyllum demersum (1 genes)
Chara braunii (1 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum L. (2 genes)
Citrullus lanatus (0 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Corylus avellana (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Davidia involucrata (1 genes)
Durio zibethinus (2 genes)
Erigeron canadensis (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Eutrema salsugineum (2 genes)
Fragaria vesca (1 genes)
Fragaria x ananassa (3 genes)
Glycine max (2 genes)
Gossypium hirsutum (6 genes)
Gossypium raimondii (5 genes)
Helianthus annuus (1 genes)
Hydrangea macrophylla (1 genes)
Lactuca sativa (2 genes)
Lonicera japonica (1 genes)
Lotus japonicus (1 genes)
Lupinus albus (1 genes)
Magnolia biondii (1 genes)
Malus domestica (2 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (1 genes)
Nicotiana tabacum (3 genes)
Olea europaea (2 genes)
Oryza sativa ssp. japonica (2 genes)
Papaver somniferum (8 genes)
Petunia axillaris (1 genes)
Phaseolus vulgaris (1 genes)
Physcomitrium patens (1 genes)
Pisum sativum (2 genes)
Populus trichocarpa (1 genes)
Prasinoderma coloniale (0 genes)
Prunus persica (1 genes)
Punica granatum (1 genes)
Quercus lobata (2 genes)
Rhododendron simsii (4 genes)
Rosa chinensis (3 genes)
Salix brachista (2 genes)
Salvia bowleyana (1 genes)
Sapria himalayana (1 genes)
Schrenkiella parvula (2 genes)
Sechium edule (1 genes)
Selaginella moellendorffii (0 genes)
Selenicereus undatus (1 genes)
Sequoiadendron giganteum (1 genes)
Simmondsia chinensis (2 genes)
Solanum lycopersicum (1 genes)
Solanum pennellii (1 genes)
Solanum tuberosum (1 genes)
Striga asiatica (1 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (2 genes)
Tripterygium wilfordii (2 genes)
Trochodendron aralioides (2 genes)
Utricularia gibba (1 genes)
Vaccinium macrocarpon (1 genes)
Vanilla planifolia (1 genes)
Vigna mungo (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)

Program Settings